RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 C1orf134Q5TEV5 83 aa0.88□□□□□ -2.27
TARDBP-220ENST00000618606 PHF5AQ7RTV0 110 aaKnown RBP0.88□□□□□ -2.27
TARDBP-220ENST00000618606 TEX29Q8N6K0 151 aa0.88□□□□□ -2.27
TARDBP-220ENST00000618606 TMEM35BQ8NCS4 154 aa0.88□□□□□ -2.27
TARDBP-220ENST00000618606 SFT2D1Q8WV19 159 aa0.88□□□□□ -2.27
TARDBP-220ENST00000618606 CHCHD1Q96BP2 118 aaKnown RBP0.88□□□□□ -2.27
TARDBP-220ENST00000618606 OR2H1Q9GZK4 316 aa0.88□□□□□ -2.27
TARDBP-220ENST00000618606 CACYBPQ9HB71 228 aaKnown RBP0.88□□□□□ -2.27
TARDBP-220ENST00000618606 LAMTOR3Q9UHA4 124 aa0.88□□□□□ -2.27
TARDBP-220ENST00000618606 HS3ST2Q9Y278 367 aa0.88□□□□□ -2.27
TARDBP-220ENST00000618606 MED31Q9Y3C7 131 aa0.88□□□□□ -2.27
TARDBP-220ENST00000618606 BAHCC1Q9P281 2608 aa0.88□□□□□ -2.27
TARDBP-220ENST00000618606 STRCP1A6NGW2 1772 aa0.88□□□□□ -2.27
TARDBP-220ENST00000618606 MYH2Q9UKX2 1941 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 MPDZO75970 2070 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 COL5A3P25940 1745 aaPredicted RBP0.87□□□□□ -2.27
TARDBP-220ENST00000618606 PLXNA3P51805 1871 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 TRGV2A0A075B6R0 118 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 MEIKINA0A087WXM9 373 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 TRAV12-1A0A0B4J245 112 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 ARPC5O15511 151 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 OR1I1O60431 355 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 HIST1H2BKO60814 126 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 PROSCO94903 275 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 CD2P06729 351 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 HIST1H2BJP06899 126 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 BRS3P32247 399 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 KLRD1Q13241 179 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 EIF3IQ13347 325 aaKnown RBP0.87□□□□□ -2.27
TARDBP-220ENST00000618606 PDE6HQ13956 83 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 KIAA2026Q5HYC2 2103 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 TOMM20LQ6UXN7 152 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 Q8N2B8 174 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 Q8N814 137 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 C12orf29Q8N999 325 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 OR5D16Q8NGK9 328 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 OR9Q1Q8NGQ5 310 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 SKA2Q8WVK7 121 aaPredicted RBP0.87□□□□□ -2.27
TARDBP-220ENST00000618606 POP5Q969H6 163 aaKnown RBP0.87□□□□□ -2.27
TARDBP-220ENST00000618606 ISOC1Q96CN7 298 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 REG4Q9BYZ8 158 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 C14orf132Q9NPU4 83 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 LAMTOR2Q9Y2Q5 125 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 HSPB11Q9Y547 144 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 BCL9O00512 1426 aa0.87□□□□□ -2.27
TARDBP-220ENST00000618606 GBF1Q92538 1859 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 CCDC88CQ9P219 2028 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 TRAV5A0A0B4J249 113 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 M0QZK8 103 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 M0R233 179 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 PFDN1O60925 122 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 MT-ND6P03923 174 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 RNASE3P12724 160 aaKnown RBP0.86□□□□□ -2.27
TARDBP-220ENST00000618606 SDC4P31431 198 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 SDC2P34741 201 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 RPL35P42766 123 aaKnown RBP0.86□□□□□ -2.27
TARDBP-220ENST00000618606 CNBPP62633 177 aaKnown RBP0.86□□□□□ -2.27
TARDBP-220ENST00000618606 CDK5R1Q15078 307 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 C10orf55Q5SWW7 151 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 LINC00305Q7Z4B0 112 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 RAB37Q96AX2 223 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 GGACTQ9BVM4 153 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 OR5AC2Q9NZP5 309 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 CHCHD2Q9Y6H1 151 aaPredicted RBP0.86□□□□□ -2.27
TARDBP-220ENST00000618606 LY96Q9Y6Y9 160 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 DOCK4Q8N1I0 1966 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 OBSL1O75147 1896 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 MYO9BQ13459 2157 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 CAMSAP2Q08AD1 1489 aa0.86□□□□□ -2.27
TARDBP-220ENST00000618606 N4BP2Q86UW6 1770 aaPredicted RBP0.85□□□□□ -2.27
TARDBP-220ENST00000618606 MYH7BA7E2Y1 1941 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 ARHGEF11O15085 1522 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 COL4A5P29400 1685 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 NUMA1Q14980 2115 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 TRBV6-8A0A0A6YYG3 113 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 IGHV1-58A0A0C4DH39 117 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 LOC107984640A0A0U1RRK4 108 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 A0A1B0GW64 132 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 TCRBV4S1A1TA0A5B7 111 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 CCDC160A6NGH7 325 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 OR2T8A6NH00 312 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 J3KT08 172 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 KPNA4O00629 521 aaPredicted RBP0.85□□□□□ -2.27
TARDBP-220ENST00000618606 DEGS1O15121 323 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 FAM107AO95990 144 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 DHFRP00374 187 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 CDK6Q00534 326 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 OR8B8Q15620 311 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 C1orf137Q5JT78 98 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 Q5XG85 94 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 TMEM14EPQ6UXP3 125 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 C4orf22Q6V702 233 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 FAM216BQ8N7L0 139 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 TMEM229BQ8NBD8 167 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 OR5D14Q8NGL3 314 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 Q8TAT8 98 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 BRK1Q8WUW1 75 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 LINC00467Q9BRT7 94 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 CBLN4Q9NTU7 201 aa0.85□□□□□ -2.27
TARDBP-220ENST00000618606 TAS2R7Q9NYW3 318 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms