RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 WIPF2Q8TF74 440 aaPredicted RBP12.34□□□□□ -0.43
MBD1-227ENST00000592060 TSKUQ8WUA8 353 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 THYN1Q9P016 225 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 RNF24Q9Y225 148 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 C19orf71A6NCJ1 209 aa12.33□□□□□ -0.44
MBD1-227ENST00000592060 HLA-DQA1P01909 254 aa12.33□□□□□ -0.44
MBD1-227ENST00000592060 SIGLEC15Q6ZMC9 328 aa12.33□□□□□ -0.44
MBD1-227ENST00000592060 NUP35Q8NFH5 326 aa12.33□□□□□ -0.44
MBD1-227ENST00000592060 FAM110DQ8TAY7 271 aaPredicted RBP12.33□□□□□ -0.44
MBD1-227ENST00000592060 C17orf77Q96MU5 243 aa12.33□□□□□ -0.44
MBD1-227ENST00000592060 PRSS22Q9GZN4 317 aa12.33□□□□□ -0.44
MBD1-227ENST00000592060 IGSF10Q6WRI0 2623 aa12.33□□□□□ -0.44
MBD1-227ENST00000592060 ABCA2Q9BZC7 2435 aa12.32□□□□□ -0.44
MBD1-227ENST00000592060 CENPVL3A0A0U1RRI6 287 aa12.32□□□□□ -0.44
MBD1-227ENST00000592060 FCGR2BP31994 310 aaPredicted RBP12.32□□□□□ -0.44
MBD1-227ENST00000592060 PAX8Q06710 450 aa12.32□□□□□ -0.44
MBD1-227ENST00000592060 RASL11AQ6T310 242 aa12.32□□□□□ -0.44
MBD1-227ENST00000592060 CMTM2Q8TAZ6 248 aa12.32□□□□□ -0.44
MBD1-227ENST00000592060 IGHV3-23P01764 117 aa12.32□□□□□ -0.44
MBD1-227ENST00000592060 GOLT1AQ6ZVE7 132 aa12.32□□□□□ -0.44
MBD1-227ENST00000592060 LYPD1Q8N2G4 141 aa12.32□□□□□ -0.44
MBD1-227ENST00000592060 ZNF414Q96IQ9 312 aa12.32□□□□□ -0.44
MBD1-227ENST00000592060 NEU1Q99519 415 aa12.32□□□□□ -0.44
MBD1-227ENST00000592060 RPP21Q9H633 154 aaKnown RBP12.32□□□□□ -0.44
MBD1-227ENST00000592060 TRAV8-1A0A0A6YYK1 113 aa12.31□□□□□ -0.44
MBD1-227ENST00000592060 F2Z2F3 143 aa12.31□□□□□ -0.44
MBD1-227ENST00000592060 SERF1AO75920 110 aa12.31□□□□□ -0.44
MBD1-227ENST00000592060 CT83Q5H943 113 aa12.31□□□□□ -0.44
MBD1-227ENST00000592060 CCL19Q99731 98 aa12.31□□□□□ -0.44
MBD1-227ENST00000592060 TXN2Q99757 166 aa12.31□□□□□ -0.44
MBD1-227ENST00000592060 FBXL7Q9UJT9 491 aa12.31□□□□□ -0.44
MBD1-227ENST00000592060 IGHV4-61A0A0C4DH41 118 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 OR2T8A6NH00 312 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 VWC2LB2RUY7 222 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 BMPR1BO00238 502 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 ATP6V0E1O15342 81 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 CTSGP08311 255 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 Q71RC1 249 aaPredicted RBP12.3□□□□□ -0.44
MBD1-227ENST00000592060 S100A7AQ86SG5 101 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 VN1R17PQ8TDU5 208 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 PIMREGQ9BSJ6 248 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 GNB4Q9HAV0 340 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 RAB4BP61018 213 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 GDF5OSQ5U4N7 250 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 UNQ5815/PRO19632Q6UWF5 114 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 TMEM75Q8N9X5 138 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 C10orf105Q8TEF2 133 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 ZNF331Q9NQX6 463 aaPredicted RBP12.3□□□□□ -0.44
MBD1-227ENST00000592060 MED13LQ71F56 2210 aa12.3□□□□□ -0.44
MBD1-227ENST00000592060 A0A1B0GXF2 115 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 HIGD1CA8MV81 97 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 NPIPB6E9PJ23 425 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 PDE6HQ13956 83 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 KIAA1644Q3SXP7 199 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 RNF224P0DH78 156 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 ECSCRQ19T08 205 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 OR10J3Q5JRS4 329 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 C16orf54Q6UWD8 224 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 CIARTQ8N365 385 aaPredicted RBP12.29□□□□□ -0.44
MBD1-227ENST00000592060 C5orf56Q8N8D9 126 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 ZNF502Q8TBZ5 544 aa12.29□□□□□ -0.44
MBD1-227ENST00000592060 HELZ2Q9BYK8 2649 aaKnown RBP12.28□□□□□ -0.44
MBD1-227ENST00000592060 ASH1LQ9NR48 2969 aaKnown RBP12.28□□□□□ -0.44
MBD1-227ENST00000592060 ZNF785A8K8V0 405 aa12.28□□□□□ -0.44
MBD1-227ENST00000592060 SCGB2A1O75556 95 aa12.28□□□□□ -0.44
MBD1-227ENST00000592060 P01737 135 aa12.28□□□□□ -0.44
MBD1-227ENST00000592060 APCSP02743 223 aa12.28□□□□□ -0.44
MBD1-227ENST00000592060 PKIAP61925 76 aa12.28□□□□□ -0.44
MBD1-227ENST00000592060 PAFAH1B2P68402 229 aa12.28□□□□□ -0.44
MBD1-227ENST00000592060 SLAQ13239 276 aa12.28□□□□□ -0.44
MBD1-227ENST00000592060 PRNTQ86SH4 94 aa12.28□□□□□ -0.44
MBD1-227ENST00000592060 BAGE3Q86Y29 109 aa12.28□□□□□ -0.44
MBD1-227ENST00000592060 TMUB1Q9BVT8 246 aa12.28□□□□□ -0.44
MBD1-227ENST00000592060 IGHV1-69DA0A0B4J2H0 117 aa12.27□□□□□ -0.44
MBD1-227ENST00000592060 NDUFS8O00217 210 aa12.27□□□□□ -0.44
MBD1-227ENST00000592060 IGHV1-69P01742 117 aa12.27□□□□□ -0.44
MBD1-227ENST00000592060 TPPP2P59282 170 aa12.27□□□□□ -0.44
MBD1-227ENST00000592060 C9orf152Q5JTZ5 239 aa12.27□□□□□ -0.44
MBD1-227ENST00000592060 TCF24Q7RTU0 167 aa12.27□□□□□ -0.44
MBD1-227ENST00000592060 GTSF1Q8WW33 167 aa12.27□□□□□ -0.44
MBD1-227ENST00000592060 SH2D7A6NKC9 451 aaPredicted RBP12.27□□□□□ -0.45
MBD1-227ENST00000592060 LINC01548A6NM66 108 aa12.27□□□□□ -0.45
MBD1-227ENST00000592060 A8MWL6 223 aa12.27□□□□□ -0.45
MBD1-227ENST00000592060 DIRC3C9JPN6 131 aa12.27□□□□□ -0.45
MBD1-227ENST00000592060 SRIP30626 198 aa12.27□□□□□ -0.45
MBD1-227ENST00000592060 C15orf32Q32M92 178 aa12.27□□□□□ -0.45
MBD1-227ENST00000592060 GFRA4Q9GZZ7 299 aa12.27□□□□□ -0.45
MBD1-227ENST00000592060 AKAP6Q13023 2319 aa12.26□□□□□ -0.45
MBD1-227ENST00000592060 IGHV3OR16-10A0A075B7F0 116 aa12.26□□□□□ -0.45
MBD1-227ENST00000592060 PAX1P15863 534 aa12.26□□□□□ -0.45
MBD1-227ENST00000592060 RHOGP84095 191 aa12.26□□□□□ -0.45
MBD1-227ENST00000592060 PSG3Q16557 428 aa12.26□□□□□ -0.45
MBD1-227ENST00000592060 OR4B1Q8NGF8 309 aa12.26□□□□□ -0.45
MBD1-227ENST00000592060 MS4A10Q96PG2 267 aa12.26□□□□□ -0.45
MBD1-227ENST00000592060 BBC3Q96PG8 261 aaPredicted RBP12.26□□□□□ -0.45
MBD1-227ENST00000592060 G3V318 75 aa12.25□□□□□ -0.45
MBD1-227ENST00000592060 M0R3E3 92 aa12.25□□□□□ -0.45
MBD1-227ENST00000592060 IQCJQ1A5X6 159 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms