RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SAMD13Q5VXD3 122 aa9.59□□□□□ -0.87
CHD7-211ENST00000532149 OR4B1Q8NGF8 309 aa9.59□□□□□ -0.87
CHD7-211ENST00000532149 BLNKQ8WV28 456 aa9.59□□□□□ -0.87
CHD7-211ENST00000532149 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
CHD7-211ENST00000532149 PRDM13Q9H4Q3 707 aa9.59□□□□□ -0.87
CHD7-211ENST00000532149 ZNF462Q96JM2 2506 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 ZNF320A2RRD8 509 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 H3BUX3 64 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 J3QKU1 62 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 TGFAP01135 160 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 LTAP01374 205 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 TRGC2P03986 189 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 CLEC3BP05452 202 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 IGHV4-38-2P0DP08 117 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 HOXA5P20719 270 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 KLF17Q5JT82 389 aaPredicted RBP9.58□□□□□ -0.88
CHD7-211ENST00000532149 COA6Q5JTJ3 125 aaKnown RBP9.58□□□□□ -0.88
CHD7-211ENST00000532149 CYB5R2Q6BCY4 276 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 ATP5L2Q7Z4Y8 100 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 TMEM183AQ8IXX5 376 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 OR8I2Q8N0Y5 310 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 MRPL53Q96EL3 112 aaKnown RBP9.58□□□□□ -0.88
CHD7-211ENST00000532149 DAZAP1Q96EP5 407 aaKnown RBP9.58□□□□□ -0.88
CHD7-211ENST00000532149 GRAMD2BQ96HH9 432 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 ZNF414Q96IQ9 312 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 METTL26Q96S19 204 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 SLC50A1Q9BRV3 221 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 MLST8Q9BVC4 326 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 GNB1LQ9BYB4 327 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 ZNF586Q9NXT0 402 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 V9GYV3 84 aa9.58□□□□□ -0.88
CHD7-211ENST00000532149 SMIM27A0A1W2PRY6 76 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 A0A1W2PS18 150 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 OR2T8A6NH00 312 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 A8MWL6 223 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 K7EN84 100 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 MRPS12O15235 138 aaKnown RBP9.57□□□□□ -0.88
CHD7-211ENST00000532149 GATCO43716 136 aaKnown RBP9.57□□□□□ -0.88
CHD7-211ENST00000532149 IGLV2-8P01709 118 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 AMY1AP04745 511 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 BMI1P35226 326 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 CDX1P47902 265 aaPredicted RBP9.57□□□□□ -0.88
CHD7-211ENST00000532149 SNRPEP62304 92 aaKnown RBP9.57□□□□□ -0.88
CHD7-211ENST00000532149 SCGB2A2Q13296 93 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 RUSC1-AS1Q66K80 236 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 BRD3OSQ6XYD6 125 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 C19orf35Q6ZS72 473 aa9.57□□□□□ -0.88
CHD7-211ENST00000532149 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.56□□□□□ -0.882e-6■■□□□ 14.1
CHD7-211ENST00000532149 NDUFA4O00483 81 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 FSHBP01225 129 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 TRGV3P03979 118 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 MGST1P10620 155 aaKnown RBP9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 PPIFP30405 207 aaKnown RBP9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 FABP9Q0Z7S8 132 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 USF2Q15853 346 aaPredicted RBP9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 ACTL10Q5JWF8 245 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 Q5PR19 223 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
CHD7-211ENST00000532149 XP32Q5T750 250 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 Q6AWC8 147 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 SIGLEC15Q6ZMC9 328 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 COX8CQ7Z4L0 72 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 TMEM86BQ8N661 226 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
CHD7-211ENST00000532149 GSX1Q9H4S2 264 aaPredicted RBP9.56□□□□□ -0.88
CHD7-211ENST00000532149 AKAP6Q13023 2319 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.55□□□□□ -0.88
CHD7-211ENST00000532149 RBAKDNA6NC62 111 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 IZUMO1RA6ND01 250 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 ZNF705GA8MUZ8 300 aaPredicted RBP9.55□□□□□ -0.88
CHD7-211ENST00000532149 IGLV1-40P01703 118 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 SMIM6P0DI80 62 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 ADMP35318 185 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 IER3P46695 156 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 TOMM20LQ6UXN7 152 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 ZFP82Q8N141 532 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 WIPF2Q8TF74 440 aaPredicted RBP9.55□□□□□ -0.88
CHD7-211ENST00000532149 TSKUQ8WUA8 353 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 NAT8BQ9UHF3 227 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 COL12A1Q99715 3063 aa9.55□□□□□ -0.88
CHD7-211ENST00000532149 A0A1B0GW15 77 aa9.54□□□□□ -0.88
CHD7-211ENST00000532149 A1L4Q6 167 aa9.54□□□□□ -0.88
CHD7-211ENST00000532149 XKRY2A2RUG3 117 aa9.54□□□□□ -0.88
CHD7-211ENST00000532149 DIRC3C9JPN6 131 aa9.54□□□□□ -0.88
CHD7-211ENST00000532149 PHOX2AO14813 284 aa9.54□□□□□ -0.88
CHD7-211ENST00000532149 BUB3O43684 328 aa9.54□□□□□ -0.88
CHD7-211ENST00000532149 HLA-DQA1P01909 254 aa9.54□□□□□ -0.88
CHD7-211ENST00000532149 TRGC1P0CF51 173 aa9.54□□□□□ -0.88
CHD7-211ENST00000532149 IGHV4-31P0DP07 118 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms