RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 IGFBP7Q16270 282 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 MIC13Q5XKP0 118 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 GPHB5Q86YW7 130 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF101Q8IZC7 436 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 Q8N2B8 174 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 FAM213BQ8TBF2 198 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 TAF15Q92804 592 aaKnown RBP eCLIP3.17□□□□□ -1.96e-6■□□□□ 11.2
BRCA1-220ENST00000492859 CHCHD5Q9BSY4 110 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 TMEM242Q9NWH2 141 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF492Q9P255 531 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 IL36RNQ9UBH0 155 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF835Q9Y2P0 537 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 MOB4Q9Y3A3 225 aa3.17□□□□□ -1.9
BRCA1-220ENST00000492859 KIAA0586Q9BVV6 1533 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 ZFP92A6NM28 416 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 SSSCA1O60232 199 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 ZNF737O75373 536 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 PPP1R3DO95685 299 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 SCGB1C2P0DMR2 95 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 SYNJ2BPP57105 145 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 LSM3P62310 102 aaKnown RBP3.16□□□□□ -1.9
BRCA1-220ENST00000492859 UBE2BP63146 152 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 CDK5R1Q15078 307 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 NMSQ5H8A3 153 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 NKAPP1Q8N9T2 125 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 VSIG2Q96IQ7 327 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 LINC00479Q96M42 142 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 FGFBP2Q9BYJ0 223 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 POLR2J2Q9GZM3 115 aaKnown RBP3.16□□□□□ -1.9
BRCA1-220ENST00000492859 SLC25A15Q9Y619 301 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 TANC2Q9HCD6 1990 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 CASP8AP2Q9UKL3 1982 aa3.16□□□□□ -1.9
BRCA1-220ENST00000492859 COL1A1P02452 1464 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-220ENST00000492859 TOPAZ1Q8N9V7 1692 aa3.15□□□□□ -1.9
BRCA1-220ENST00000492859 TRAV9-2A0A087WT02 112 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 IGHV4-61A0A0C4DH41 118 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 NAP1L6A6NFF2 107 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 IGHV4-59P01825 116 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 IGKCP01834 107 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 HLA-DQA1P01909 254 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 SRP19P09132 144 aaKnown RBP3.15□□□□□ -1.91
BRCA1-220ENST00000492859 ZNF823P16415 610 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 COL8A2P25067 703 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 FAUP35544 74 aaKnown RBP3.15□□□□□ -1.91
BRCA1-220ENST00000492859 CSN1S1P47710 185 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 DYNLT3P51808 116 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 SS18Q15532 418 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 CCL14Q16627 93 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 TMEM155Q4W5P6 130 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 SBSPONQ8IVN8 264 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 POM121L12Q8N7R1 296 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-220ENST00000492859 LINC01555Q8NAE3 123 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 APCDD1LQ8NCL9 501 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 OR10G2Q8NGC3 310 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 WFDC5Q8TCV5 224 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 RNASE6Q93091 150 aaKnown RBP3.15□□□□□ -1.91
BRCA1-220ENST00000492859 URB1-AS1Q96HZ7 61 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 CHAC1Q9BUX1 264 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 SMDT1Q9H4I9 107 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 SLC25A22Q9H936 323 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 ZNF286AQ9HBT8 521 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 EPDR1Q9UM22 224 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 NKTRP30414 1462 aaKnown RBP3.15□□□□□ -1.91
BRCA1-220ENST00000492859 DOCK7Q96N67 2140 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 NUP188Q5SRE5 1749 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 KIAA1210Q9ULL0 1709 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 MAST2Q6P0Q8 1798 aa3.15□□□□□ -1.91
BRCA1-220ENST00000492859 MAP3K4Q9Y6R4 1608 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 TSPOAP1O95153 1857 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 PIK3C2AO00443 1686 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 KANTRA0A1W2PQU2 76 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 hADV29S1A0JD25 119 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 UMAD1C9J7I0 102 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 K7EQG2 157 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 SDCBPO00560 298 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-220ENST00000492859 NUPR1O60356 82 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 TSHBP01222 138 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 LTAP01374 205 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 IGLV2-8P01709 118 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 HBDP02042 147 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 HLA-DPB1P04440 258 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 IL5P05113 134 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 CD7P09564 240 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 IGHV1-2P23083 117 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 MRPS36P82909 103 aaKnown RBP3.14□□□□□ -1.91
BRCA1-220ENST00000492859 FUT5Q11128 374 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 ODF3L2Q3SX64 289 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 LINC01554Q52M75 96 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 CXCL17Q6UXB2 119 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 Q6ZQT7 251 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 SPATA12Q7Z6I5 190 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 AMN1Q8IY45 258 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 MYOZ3Q8TDC0 251 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 PGLYRP2Q96PD5 576 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 SDF2L1Q9HCN8 221 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 EHBP1L1Q8N3D4 1523 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.14□□□□□ -1.91
BRCA1-220ENST00000492859 OBSL1O75147 1896 aa3.14□□□□□ -1.91
BRCA1-220ENST00000492859 NUMA1Q14980 2115 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms