RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ZNF596Q8TC21 504 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 ASB13Q8WXK3 278 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 TNFRSF14Q92956 283 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 RNF185Q96GF1 192 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 ABHD14BQ96IU4 210 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 OR2A7Q96R45 310 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 PHB2Q99623 299 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF251Q9BRH9 671 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 SUCNR1Q9BXA5 334 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 PARP12Q9H0J9 701 aaKnown RBP2.72□□□□□ -1.97
PTCD3-216ENST00000487043 TMEM222Q9H0R3 208 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 TMEM133Q9H2Q1 129 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 IFI27L2Q9H2X8 130 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 NAA60Q9H7X0 242 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 SDHAF2Q9NX18 166 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 PSG11Q9UQ72 335 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 PSG8Q9UQ74 426 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 SPG11Q96JI7 2443 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 AKAP6Q13023 2319 aa2.71□□□□□ -1.97
PTCD3-216ENST00000487043 YLPM1P49750 1951 aaKnown RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 CELSR2Q9HCU4 2923 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 PIGBOS1A0A0B4J2F0 54 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 H0Y980 276 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 M0R1W7 72 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 GATCO43716 136 aaKnown RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 ENSAO43768 121 aaKnown RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 IGHV3-7P01780 117 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 IFNA4P05014 189 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 OR5AC1P0C628 307 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 USF1P22415 310 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 PRTN3P24158 256 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 H2BFSP57053 126 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 ARF6P62330 175 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 RPL30P62888 115 aaKnown RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 LOXL1Q08397 574 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 CATR1Q13166 79 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 IL15RAQ13261 267 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 SLC9A3R2Q15599 337 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 CLEC12BQ2HXU8 276 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 SP6Q3SY56 376 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 Q5BKY6 102 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 ZNF429Q86V71 674 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 SELENOHQ8IZQ5 122 aaKnown RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 LGI3Q8N145 548 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 C9orf62Q8N4C0 152 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 Q8N7P7 452 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 LINC00469Q8N7U9 141 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 OR11H6Q8NGC7 330 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 OR51G1Q8NGK1 321 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 CASTOR1Q8WTX7 329 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 LEAP2Q969E1 77 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 RPEQ96AT9 228 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 ADTRPQ96IZ2 230 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 TMEM56Q96MV1 263 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 TP53RKQ96S44 253 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 HSD17B10Q99714 261 aaKnown RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 PDCD10Q9BUL8 212 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 SLC25A2Q9BXI2 301 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 OR2D2Q9H210 308 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 METTL8Q9H825 291 aaKnown RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 BIN3Q9NQY0 253 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 PRELID3BQ9Y3B1 194 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 INSIG2Q9Y5U4 225 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 TMEM56-RWDD3S4R434 201 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 CRYBG3Q68DQ2 2970 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 APCP25054 2843 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 ARID1AO14497 2285 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 DOPEY2Q9Y3R5 2298 aa2.71□□□□□ -1.98
PTCD3-216ENST00000487043 ANKRD17O75179 2603 aaKnown RBP2.71□□□□□ -1.98
PTCD3-216ENST00000487043 PTPN13Q12923 2485 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 FBN2P35556 2912 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 A0A096LNT2 108 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 IGHV2-26A0A0B4J1V2 119 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 DUXBA0A1W2PPF3 345 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 ZNF98A6NK75 572 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 B4DSR2 109 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 F8W036 122 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 LY6LH3BQJ8 138 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 BUB1B-PAK6H3BSN5 160 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 M0R1X1 148 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 RBFOX2O43251 390 aaKnown RBP eCLIP2.7□□□□□ -1.983e-7■□□□□ 9.8
PTCD3-216ENST00000487043 ADAP1O75689 374 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 ATG12O94817 140 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 SIX6O95475 246 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 HPRT1P00492 218 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 IFNA21P01568 189 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 SAA2P0DJI9 122 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-216ENST00000487043 SLC25A6P12236 298 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 IL3RAP26951 378 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 LPAR6P43657 344 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 UBE2AP49459 152 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 GNG10P50151 68 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 ZNF137PP52743 207 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 KRTAP10-3P60369 221 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 HERVK_113P61574 105 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 POLR2GP62487 172 aaKnown RBP eCLIP2.7□□□□□ -1.98
PTCD3-216ENST00000487043 BTN1A1Q13410 526 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 HLA-DRB5Q30154 266 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 RPL39P5Q59GN2 51 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 301.4 ms