RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 MED31Q9Y3C7 131 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 ASB4Q9Y574 426 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 COL4A5P29400 1685 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 NISCHQ9Y2I1 1504 aa1.25□□□□□ -2.21
VLDLR-204ENST00000478776 ARAP1Q96P48 1450 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 GBF1Q92538 1859 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 FHAD1B1AJZ9 1412 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 BCL9O00512 1426 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 TRAPPC8Q9Y2L5 1435 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 ODAMA1E959 279 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 GABARAPH6UMI1 98 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 LYZL6O75951 148 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 CRPP02741 224 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 GPX1P07203 203 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 ZNF705BP0CI00 300 aaPredicted RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 S100A11P31949 105 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 RPL35P42766 123 aaKnown RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 RPS28P62857 69 aaKnown RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 HBBP68871 147 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 PDE6HQ13956 83 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 MSMO1Q15800 293 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 RNASE10Q5GAN6 216 aaKnown RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 FP248Q71RG6 208 aaPredicted RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 RPS19BP1Q86WX3 136 aaKnown RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 LINC00311Q8N616 119 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 ST6GALNAC3Q8NDV1 305 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 OR5D16Q8NGK9 328 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 AIF1LQ9BQI0 150 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 C6orf62Q9GZU0 229 aaPredicted RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 CACYBPQ9HB71 228 aaKnown RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 OR5AC2Q9NZP5 309 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 NAT8BQ9UHF3 227 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 SOX21Q9Y651 276 aaPredicted RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 LY96Q9Y6Y9 160 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 SCN8AQ9UQD0 1980 aa1.24□□□□□ -2.21
VLDLR-204ENST00000478776 NUP210Q8TEM1 1887 aaPredicted RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 N4BP2Q86UW6 1770 aaPredicted RBP1.24□□□□□ -2.21
VLDLR-204ENST00000478776 ANAPC1Q9H1A4 1944 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 ANKRD31Q8N7Z5 1873 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 TRAV12-1A0A0B4J245 112 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 ARL5CA6NH57 179 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 C2orf70A6NJV1 201 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 C17orf112F2Z3M2 114 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 OR1I1O60431 355 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 DHFRP00374 187 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 RPL7P18124 248 aaKnown RBP1.23□□□□□ -2.21
VLDLR-204ENST00000478776 RPS3P23396 243 aaKnown RBP eCLIP1.23□□□□□ -2.21
VLDLR-204ENST00000478776 ROMO1P60602 79 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 RAB4BP61018 213 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 PCOTHQ58A44 107 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 TMEM35BQ8NCS4 154 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 SFT2D1Q8WV19 159 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 Q96M85 177 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 ZNF714Q96N38 554 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 RETNLBQ9BQ08 111 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 TCEAL2Q9H3H9 227 aaPredicted RBP1.23□□□□□ -2.21
VLDLR-204ENST00000478776 SPANXCQ9NY87 97 aa1.23□□□□□ -2.21
VLDLR-204ENST00000478776 FN1P02751 2386 aaKnown RBP1.22□□□□□ -2.21
VLDLR-204ENST00000478776 RTL9Q8NET4 1388 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 ARHGEF11O15085 1522 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 MYH10P35580 1976 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 TRAV14DV4A0A0A6YYC5 116 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 J3QKU1 62 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 K7ERJ3 54 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 KPNA4O00629 521 aaPredicted RBP1.22□□□□□ -2.21
VLDLR-204ENST00000478776 OVOL1O14753 267 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 RER1O15258 196 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 OR10J4P0C629 311 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 C10orf55Q5SWW7 151 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 HRCT1Q6UXD1 115 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 MCEEQ96PE7 176 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 BRWD1Q9NSI6 2320 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 RGS12O14924 1447 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 MICAL3Q7RTP6 2002 aa1.22□□□□□ -2.21
VLDLR-204ENST00000478776 FRMPD1Q5SYB0 1578 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 TRGV2A0A075B6R0 118 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 A0A087WX48 190 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 IGHV1-58A0A0C4DH39 117 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 TRBV7-6A0A0J9YX20 115 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 TRBV6-5A0A0K0K1A5 114 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 A0A1B0GX51 115 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 J3KT08 172 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 BRS3P32247 399 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 SDC2P34741 201 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 RAB5CP51148 216 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 DSCR4P56555 118 aaPredicted RBP1.21□□□□□ -2.22
VLDLR-204ENST00000478776 NDUFA6P56556 154 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 PSG9Q00887 426 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 KLRD1Q13241 179 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 DEFB113Q30KQ7 82 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 OR2T35Q8NGX2 323 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 OR4K15Q8NH41 348 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 TMEM254Q8TBM7 123 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 POP5Q969H6 163 aaKnown RBP1.21□□□□□ -2.22
VLDLR-204ENST00000478776 CHCHD1Q96BP2 118 aaKnown RBP1.21□□□□□ -2.22
VLDLR-204ENST00000478776 LXNQ9BS40 222 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 JPT1Q9UK76 154 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 TRAPPC2LQ9UL33 140 aa1.21□□□□□ -2.22
VLDLR-204ENST00000478776 XIRP1Q702N8 1843 aaKnown RBP1.21□□□□□ -2.22
VLDLR-204ENST00000478776 TENM1Q9UKZ4 2725 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms