RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 RBMY1A1P0DJD3 496 aaKnown RBP12.85□□□□□ -0.35
BRAT1-204ENST00000469750 RBMY1CP0DJD4 496 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 PIP4P2Q8N4L2 257 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 SPTAN1Q13813 2472 aaKnown RBP12.85□□□□□ -0.35
BRAT1-204ENST00000469750 TRBV24-1A0A075B6N3 115 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 SAA4P35542 130 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 LINC00205P59089 165 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 TMEM95Q3KNT9 176 aa12.85□□□□□ -0.35
BRAT1-204ENST00000469750 ABCA4P78363 2273 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 C15orf62A8K5M9 175 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 GZMBP10144 247 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 IGFL3Q6UXB1 125 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 REG4Q9BYZ8 158 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 FAM223BA6NKX1 122 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 ITGB1BP1O14713 200 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 FAM223AQ8IWN6 122 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 PKDREJQ9NTG1 2253 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 TMEM8BA6NDV4 472 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 LINC01549A6NIU2 74 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 NDPQ00604 133 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 DTX2Q86UW9 622 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 CHCHD5Q9BSY4 110 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 LINC01551Q86U37 167 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 SPANXA1Q9NS26 97 aa12.84□□□□□ -0.35
BRAT1-204ENST00000469750 MPDZO75970 2070 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 TRAV8-4A0A0B4J246 113 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 RNASE2P10153 161 aaKnown RBP12.83□□□□□ -0.36
BRAT1-204ENST00000469750 GAGE13Q4V321 117 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 SRRM4A7MD48 611 aaKnown RBP12.83□□□□□ -0.36
BRAT1-204ENST00000469750 ERVK11-1P61568 191 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 GTSF1LQ9H1H1 148 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 RCHY1Q96PM5 261 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 SRSF8Q9BRL6 282 aaKnown RBP12.83□□□□□ -0.36
BRAT1-204ENST00000469750 NHP2Q9NX24 153 aaKnown RBP12.83□□□□□ -0.36
BRAT1-204ENST00000469750 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.36
BRAT1-204ENST00000469750 FER1L5A0AVI2 2057 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 CRPP02741 224 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 FOXL1Q12952 345 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 SAMD5Q5TGI4 173 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 ZNF329Q86UD4 541 aa12.83□□□□□ -0.36
BRAT1-204ENST00000469750 A0A0G2JRQ6 117 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 TOMM40O96008 361 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 RNF182Q8N6D2 247 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 SSC4DQ8WTU2 575 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 IFI27L1Q96BM0 104 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 LINC00477Q96M19 166 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 C11orf68Q9H3H3 251 aaKnown RBP12.82□□□□□ -0.36
BRAT1-204ENST00000469750 IGKV1-16P04430 117 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 HSD52Q0P140 79 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 PLA2G2CQ5R387 149 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 LYPD1Q8N2G4 141 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 RPRMLQ8N4K4 120 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 PROK2Q9HC23 129 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 EP400Q96L91 3159 aa12.82□□□□□ -0.36
BRAT1-204ENST00000469750 TP53BP1Q12888 1972 aaPredicted RBP12.82□□□□□ -0.36
BRAT1-204ENST00000469750 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 FNDC10F2Z333 226 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 ADARB2-AS1A8MUL3 147 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 KLHL30-AS1Q8NEE0 82 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 PRADC1Q9BSG0 188 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 RFNGQ9Y644 331 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 DOCK8Q8NF50 2099 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 FCN3O75636 299 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 SRSF4Q08170 494 aaKnown RBP12.81□□□□□ -0.36
BRAT1-204ENST00000469750 LCN12Q6JVE5 192 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 LYZL1Q6UWQ5 148 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 Q6ZRM9 215 aa12.81□□□□□ -0.36
BRAT1-204ENST00000469750 ABCA1O95477 2261 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 PHF3Q92576 2039 aaKnown RBP12.8□□□□□ -0.36
BRAT1-204ENST00000469750 A8MWV9 139 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 LY96Q9Y6Y9 160 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 IGKCP01834 107 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 CFPP27918 469 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 SP5Q6BEB4 398 aaPredicted RBP12.8□□□□□ -0.36
BRAT1-204ENST00000469750 LCNL1Q6ZST4 164 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 LRRK1Q38SD2 2015 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 GATA4P43694 442 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 PSG3Q16557 428 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 Q8TCH9 128 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 RHPN1-AS1Q9BWJ2 59 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 MSMBP08118 114 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 GATA3P23771 443 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 LMO1P25800 156 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 ZNF415Q09FC8 603 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 LAGE3Q14657 143 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 ACTL10Q5JWF8 245 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 RASL11AQ6T310 242 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 ZNF479Q96JC4 524 aa12.8□□□□□ -0.36
BRAT1-204ENST00000469750 KIAA2026Q5HYC2 2103 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 CXCL1P09341 107 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 Q8TAT8 98 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 MS4A6AQ9H2W1 248 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 CACNA1HO95180 2353 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 TRAV12-3A0A0B4J271 114 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 PAX2Q02962 417 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 OR9G4Q8NGQ1 327 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 SH2D1AO60880 128 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 NCR2O95944 276 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 CEACAM8P31997 349 aaPredicted RBP12.79□□□□□ -0.36
BRAT1-204ENST00000469750 UBE2E1P51965 193 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms