RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 RPS3P23396 243 aaKnown RBP eCLIP0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 SSR2P43308 183 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 HBBP68871 147 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 PCOTHQ58A44 107 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 PATE2Q6UY27 113 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 LINC00301Q8NCQ3 95 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 TMEM35BQ8NCS4 154 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 OR9Q1Q8NGQ5 310 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 OR2T35Q8NGX2 323 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 ZNF625Q96I27 306 aaPredicted RBP0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 RETNLBQ9BQ08 111 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 AIF1LQ9BQI0 150 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 LINC00467Q9BRT7 94 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 CACYBPQ9HB71 228 aaKnown RBP0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 C14orf132Q9NPU4 83 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 NAT8BQ9UHF3 227 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 TRAPPC2LQ9UL33 140 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 LAMTOR2Q9Y2Q5 125 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 MED31Q9Y3C7 131 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 LY96Q9Y6Y9 160 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 N4BP2Q86UW6 1770 aaPredicted RBP0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 BAHCC1Q9P281 2608 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 SBF1O95248 1867 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 PLXNA3P51805 1871 aa0.8□□□□□ -2.28
GTF3C3-209ENST00000466862 VWDEQ8N2E2 1590 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 CCDC88CQ9P219 2028 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 TRPM1Q7Z4N2 1603 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 PIK3C2AO00443 1686 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 TRAV5A0A0B4J249 113 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 C2orf70A6NJV1 201 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 B4DSR2 109 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 RER1O15258 196 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 ARPC5O15511 151 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 OR1I1O60431 355 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 HIST1H2BKO60814 126 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 LYZL6O75951 148 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 FAM107AO95990 144 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 PRB1P04280 392 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 IFNA4P05014 189 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 HIST1H2BJP06899 126 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 SCGB1A1P11684 91 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 FABP2P12104 132 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 BRS3P32247 399 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 ARPC4P59998 168 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 EIF3IQ13347 325 aaKnown RBP0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 DEFB113Q30KQ7 82 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 PHF5AQ7RTV0 110 aaKnown RBP0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 C12orf29Q8N999 325 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 OR5D16Q8NGK9 328 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 SFT2D1Q8WV19 159 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 POP5Q969H6 163 aaKnown RBP0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 OR2H1Q9GZK4 316 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 TAF9BQ9HBM6 251 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 NUP98P52948 1817 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 ARHGEF10O15013 1369 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 RGS12O14924 1447 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 ARAP1Q96P48 1450 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 MDC1Q14676 2089 aaKnown RBP0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 NUMA1Q14980 2115 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 ARHGEF11O15085 1522 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 FRMPD1Q5SYB0 1578 aa0.79□□□□□ -2.28
GTF3C3-209ENST00000466862 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 ZFHX2Q9C0A1 2572 aaPredicted RBP0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 A0A087WX48 190 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 IGKV2D-26A0A0A0MRZ7 120 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 TRAV12-1A0A0B4J245 112 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 ARL5CA6NH57 179 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 C17orf112F2Z3M2 114 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 J3KT08 172 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 DHFRP00374 187 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 OR10J4P0C629 311 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 SDC2P34741 201 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 RPL35P42766 123 aaKnown RBP0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 RAB5CP51148 216 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 ROMO1P60602 79 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 RAB4BP61018 213 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 KLRD1Q13241 179 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 PDE6HQ13956 83 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 OR8B8Q15620 311 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 CLECL1Q8IZS7 167 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 TEX29Q8N6K0 151 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 TMEM254Q8TBM7 123 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 CHCHD1Q96BP2 118 aaKnown RBP0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 TCEAL2Q9H3H9 227 aaPredicted RBP0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 NIT2Q9NQR4 276 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 SPANXA1Q9NS26 97 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 GSKIPQ9P0R6 139 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 JPT1Q9UK76 154 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 BCL9O00512 1426 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 TRAPPC8Q9Y2L5 1435 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 NISCHQ9Y2I1 1504 aa0.78□□□□□ -2.28
GTF3C3-209ENST00000466862 COL4A5P29400 1685 aa0.78□□□□□ -2.29
GTF3C3-209ENST00000466862 TAF1LQ8IZX4 1826 aa0.78□□□□□ -2.29
GTF3C3-209ENST00000466862 DOCK10Q96BY6 2186 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 RTTNQ86VV8 2226 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 CACNA1GO43497 2377 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 FN1P02751 2386 aaKnown RBP0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 TRAV36DV7A0A075B6V5 113 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 IGHV1-58A0A0C4DH39 117 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 LOC107984640A0A0U1RRK4 108 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms