RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 C15orf32Q32M92 178 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 TREML4Q6UXN2 200 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 TMEM141Q96I45 108 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 AGMATQ9BSE5 352 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 C1QTNF5Q9BXJ0 243 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 MSRB2Q9Y3D2 182 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 ASCC3Q8N3C0 2202 aaKnown RBP6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 ZNF329Q86UD4 541 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 LIME1Q9H400 295 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 IGKV1D-43A0A0B4J1Z2 117 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 IGHV4-28A0A0C4DH34 117 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 KNCNA6PVL3 124 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 CD160O95971 181 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 BTCP35070 178 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 KLHDC3Q9BQ90 382 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 H3BMG7 143 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 DEFB130BP0DP73 79 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 DEFB130AP0DP74 79 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 PSG7Q13046 419 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 ARAP2Q8WZ64 1704 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 KMT2EQ8IZD2 1858 aa6.47□□□□□ -1.37
RBFOX2-205ENST00000405409 TRAV13-2A0A0B4J235 113 aa6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 SHISA3A0PJX4 238 aa6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 ETDBQ3ZM63 59 aa6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 LY6G6FQ5SQ64 297 aa6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 LILRA6Q6PI73 481 aa6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 VMO1Q7Z5L0 202 aa6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 CRYGCP07315 174 aa6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 SUPT4H1P63272 117 aaKnown RBP6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 SPTSSBQ8NFR3 76 aa6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 COL11A1P12107 1806 aaPredicted RBP6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 TPRP12270 2363 aaKnown RBP6.46□□□□□ -1.37
RBFOX2-205ENST00000405409 J3QW42 95 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 CSRP1P21291 193 aaKnown RBP6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 HGFACQ04756 655 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 C8orf49Q96NF6 230 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 SIGLEC12Q96PQ1 595 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 CACNA1AO00555 2505 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 TRBV25-1A0A075B6N4 114 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 TRBV7-1A0A0A6YYK4 115 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 C17orf100A8MU93 164 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 H0YIZ8 118 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 ORMDL1Q9P0S3 153 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 METRNQ9UJH8 293 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 RFNGQ9Y644 331 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 LY75O60449 1722 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 A0A1B0GW64 132 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 PDCD11Q14690 1871 aaKnown RBP6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 ZNF831Q5JPB2 1677 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 DKK1O94907 266 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 CSRP2Q16527 193 aa6.46□□□□□ -1.38
RBFOX2-205ENST00000405409 C4orf51C9J302 202 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 I3L3M4 83 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 RNASE2P10153 161 aaKnown RBP6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 TDRD6O60522 2096 aaKnown RBP6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 IGHV4-4A0A075B6R2 117 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 J3KT08 172 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 RFPL3SP0C7P2 107 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 CFHR2P36980 270 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 MRPL23Q16540 153 aaKnown RBP6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 OR11H6Q8NGC7 330 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 PRO1854Q9UHT4 67 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 A0A0A6YYD4 124 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 TGFBR3LH3BV60 316 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 LINC00271P0C7V0 271 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 LYNX1G3V0Z9 82 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 CEP290O15078 2479 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 LYNX1P0DP58 116 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 PRO3102Q9H379 93 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 URB1O60287 2271 aaKnown RBP6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 SMCHD1A6NHR9 2005 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 F6UB75 175 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 PPP1R32Q7Z5V6 425 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 LYZL4Q96KX0 146 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 TRGV9Q99603 122 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 SPATA25Q9BR10 227 aa6.45□□□□□ -1.38
RBFOX2-205ENST00000405409 IGHV3-38A0A0C4DH36 116 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 BVES-AS1Q5T3Y7 98 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 FAM104BQ5XKR9 115 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 TRAV26-2A0A0B4J265 109 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 PRSS29PA6NIE9 313 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 CLPSL2Q6UWE3 100 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 WDR83OSQ9Y284 106 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 CKAP5Q14008 2032 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 A0A1B0GUS0 222 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 TMEM213A2RRL7 107 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 THBDP07204 575 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 BAALC-AS2P0C853 105 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 F5H768 121 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 IGLC2P0DOY2 106 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 IGLC3P0DOY3 106 aa6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 MRPL55Q7Z7F7 128 aaKnown RBP6.44□□□□□ -1.38
RBFOX2-205ENST00000405409 IL17RELQ6ZVW7 336 aa6.43□□□□□ -1.38
RBFOX2-205ENST00000405409 ITGB4P16144 1822 aa6.43□□□□□ -1.38
RBFOX2-205ENST00000405409 GBF1Q92538 1859 aa6.43□□□□□ -1.38
RBFOX2-205ENST00000405409 C10orf55Q5SWW7 151 aa6.43□□□□□ -1.38
RBFOX2-205ENST00000405409 GFRA4Q9GZZ7 299 aa6.43□□□□□ -1.38
RBFOX2-205ENST00000405409 IGHV2-26A0A0B4J1V2 119 aa6.43□□□□□ -1.38
RBFOX2-205ENST00000405409 IGKV3D-7A0A0C4DH55 119 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms