RNA–Protein interactions for RNA: ENST00000390490.1

TRAJ47-201, Transcript of T cell receptor alpha joining 47, humanhuman

APPRIS P1 BASIC

Gene TRAJ47, Length 57 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ47-201ENST00000390490 OR5D14Q8NGL3 314 aa0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 TMEM254Q8TBM7 123 aa0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 SFT2D1Q8WV19 159 aa0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 CHCHD1Q96BP2 118 aaKnown RBP0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 ZC2HC1AQ96GY0 325 aa0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 ZNF625Q96I27 306 aaPredicted RBP0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 LXNQ9BS40 222 aa0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 TCEAL2Q9H3H9 227 aaPredicted RBP0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 RASL12Q9NYN1 266 aa0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 CPAMD8Q8IZJ3 1885 aa0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 ZNF106Q9H2Y7 1883 aaKnown RBP0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 ARHGEF28Q8N1W1 1705 aaKnown RBP0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 GREB1Q4ZG55 1949 aa0.58□□□□□ -2.32
TRAJ47-201ENST00000390490 RTL9Q8NET4 1388 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 VWDEQ8N2E2 1590 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 BRWD1Q9NSI6 2320 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 IGKV2D-26A0A0A0MRZ7 120 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 IGHV1-58A0A0C4DH39 117 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 A0A1B0GX51 115 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 TCRBV4S1A1TA0A5B7 111 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 OR2T8A6NH00 312 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 DEGS1O15121 323 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 LYRM1O43325 122 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 HYPMO75409 117 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 MT-ND6P03923 174 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 GTF2A1P52655 376 aaPredicted RBP0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 DSCR4P56555 118 aaPredicted RBP0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 KRTAP12-1P59990 96 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 ROMO1P60602 79 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 RPS28P62857 69 aaKnown RBP0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 CDK6Q00534 326 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 CDK5R1Q15078 307 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 OR8B8Q15620 311 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 VMA21Q3ZAQ7 101 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 CCDC153Q494R4 210 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 C1orf137Q5JT78 98 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 C2orf82Q6UX34 121 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 LINC00305Q7Z4B0 112 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 KRTAP13-1Q8IUC0 172 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 LRRC18Q8N456 261 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 TEX29Q8N6K0 151 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 FAM216BQ8N7L0 139 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 TMEM229BQ8NBD8 167 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 OR4B1Q8NGF8 309 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 OR4C6Q8NH72 309 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 C4orf3Q8WVX3 66 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 POP5Q969H6 163 aaKnown RBP0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 RAB37Q96AX2 223 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 MUCL1Q96DR8 90 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 MCEEQ96PE7 176 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 NAA38Q9BRA0 125 aaKnown RBP0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 REG4Q9BYZ8 158 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 SPANXCQ9NY87 97 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 SOX21Q9Y651 276 aaPredicted RBP0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 PLXND1Q9Y4D7 1925 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 ARHGEF11O15085 1522 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 MPDZO75970 2070 aa0.57□□□□□ -2.32
TRAJ47-201ENST00000390490 TNS3Q68CZ2 1445 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 NCKAP5O14513 1909 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 ARAP1Q96P48 1450 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 MYH11P35749 1972 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 STRCP1A6NGW2 1772 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 STRCQ7RTU9 1775 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 NISCHQ9Y2I1 1504 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 TRAV36DV7A0A075B6V5 113 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 TRAV27A0A087WT01 109 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 A0A087WX48 190 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 TRBV6-8A0A0A6YYG3 113 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 BORCS7-ASMTA0A0B4J1R7 106 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 TRAV10A0A0B4J240 114 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 TRAV13-1A0A0B4J241 112 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 TRBV7-6A0A0J9YX20 115 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 TRBV27A0A0K0K1C4 114 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 LOC107984640A0A0U1RRK4 108 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 hDV103S1A0JD37 113 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 CCDC160A6NGH7 325 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 B4DSR2 109 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 C5orf58C9J3I9 102 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 E7EUB6 86 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 H3BMG7 143 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 J3QKU1 62 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 ARPC5O15511 151 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 MRPS14O60783 128 aaKnown RBP0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 ERC2-IT1O76042 136 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 DPM2O94777 84 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 IGLV1-51P01701 117 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 CD2P06729 351 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 DBIP07108 87 aaKnown RBP0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 RNASE3P12724 160 aaKnown RBP0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 CMPK1P30085 196 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 SRP9P49458 86 aaKnown RBP0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 ARPC4P59998 168 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 KRTAP12-3P60328 96 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 MRPS36P82909 103 aaKnown RBP0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 PSG9Q00887 426 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 C1orf134Q5TEV5 83 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 TEX261Q6UWH6 196 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 OR8I2Q8N0Y5 310 aa0.56□□□□□ -2.32
TRAJ47-201ENST00000390490 Q8N2B8 174 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 370.1 ms