RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 RNASE7Q9H1E1 156 aaKnown RBP10.59□□□□□ -0.71
PTPRN2-203ENST00000389418 MSMBP08118 114 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 PPIFP30405 207 aaKnown RBP10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 SUMO2P61956 95 aaKnown RBP10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 NRGNQ92686 78 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 TMEM262E9PQX1 116 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 H3BRM9 83 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 RPL24P83731 157 aaKnown RBP10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 Q6ZRM9 215 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 LYPD1Q8N2G4 141 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 PSG1P11464 419 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 MLANAQ16655 118 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 RSPO1Q2MKA7 263 aaPredicted RBP10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 Q6ZR03 302 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 CD7P09564 240 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 MEIG1Q5JSS6 88 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 HIST1H4GQ99525 98 aa10.58□□□□□ -0.72
PTPRN2-203ENST00000389418 IGKV1-16P04430 117 aa10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 SRSF4Q08170 494 aaKnown RBP10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 ZNF585BQ52M93 769 aa10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 PARD6GQ9BYG4 376 aaPredicted RBP10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 IGKV1-6A0A0C4DH72 117 aa10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 A0A1B0GW64 132 aa10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 BEX4Q9NWD9 120 aaPredicted RBP10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 RANBP2P49792 3224 aaKnown RBP10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 NDPQ00604 133 aa10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 TCF23Q7RTU1 214 aa10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 COL4A3Q01955 1670 aa10.57□□□□□ -0.72
PTPRN2-203ENST00000389418 APOHP02749 345 aaPredicted RBP10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 ZNF562Q6V9R5 426 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 OCC1Q8TAD7 63 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 SCGB3A1Q96QR1 104 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 NCOA6Q14686 2063 aaPredicted RBP10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 IGLV3-9A0A075B6K5 115 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 TRAV5A0A0B4J249 113 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 ATP5L2Q7Z4Y8 100 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 LINC00469Q8N7U9 141 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 TMEM242Q9NWH2 141 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 SAA4P35542 130 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 RPL15P61313 204 aaKnown RBP10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 NXT2Q9NPJ8 142 aaKnown RBP10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 C7orf71A4D174 169 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 FBLN7Q53RD9 439 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 SLC25A39Q9BZJ4 359 aaPredicted RBP10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 RNF114Q9Y508 228 aa10.56□□□□□ -0.72
PTPRN2-203ENST00000389418 J3QLI3 93 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 FABP2P12104 132 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 IGFL2Q6UWQ7 119 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 ARL6IP6Q8N6S5 226 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 C2orf16Q68DN1 1984 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 HINT1P49773 126 aaPredicted RBP10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 Q5PR19 223 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 IGFL4Q6B9Z1 124 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 J3QKU1 62 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 RIPPLY3P57055 190 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 TSKUQ8WUA8 353 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 ST20Q9HBF5 79 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 GSN-AS1Q9NRJ2 163 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 SOD3P08294 240 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 LINC01559Q495D7 138 aa10.55□□□□□ -0.72
PTPRN2-203ENST00000389418 TMEM50AO95807 157 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 SPATA31B1PQ5VZV4 182 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 DTX2Q86UW9 622 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 LINC00311Q8N616 119 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 LINC00477Q96M19 166 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 OR10J3Q5JRS4 329 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 TMEM170BQ5T4T1 132 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 TEX36Q5VZQ5 186 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 RNF166Q96A37 237 aaPredicted RBP10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 SEPSECSQ9HD40 501 aaKnown RBP10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 LY96Q9Y6Y9 160 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 PRRC2AP48634 2157 aaKnown RBP10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 TCF21O43680 179 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 C1QTNF4Q9BXJ3 329 aa10.54□□□□□ -0.72
PTPRN2-203ENST00000389418 Q96MF0 132 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 PMS2P5A8MQ11 134 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 ERVK11-1P61568 191 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 DNLZQ5SXM8 178 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 PIP4P2Q8N4L2 257 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 OR5AN1Q8NGI8 311 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 ZNF256Q9Y2P7 627 aaPredicted RBP10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 A0A1B0GV90 55 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 TOMM40O96008 361 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 ORMDL2Q53FV1 153 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 FAM19A2Q8N3H0 131 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 C18orf15Q96N68 181 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 LINC00587B1AMM8 73 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 SLX1AQ9BQ83 275 aa10.53□□□□□ -0.72
PTPRN2-203ENST00000389418 RNASE2P10153 161 aaKnown RBP10.52□□□□□ -0.72
PTPRN2-203ENST00000389418 MGST2Q99735 147 aa10.52□□□□□ -0.72
PTPRN2-203ENST00000389418 GNB1LQ9BYB4 327 aa10.52□□□□□ -0.72
PTPRN2-203ENST00000389418 LYL1P12980 280 aa10.52□□□□□ -0.73
PTPRN2-203ENST00000389418 HOXA5P20719 270 aa10.52□□□□□ -0.73
PTPRN2-203ENST00000389418 ZNF138P52744 262 aa10.52□□□□□ -0.73
PTPRN2-203ENST00000389418 SRSF1Q07955 248 aaKnown RBP eCLIP10.52□□□□□ -0.735e-7■□□□□ 8.8
PTPRN2-203ENST00000389418 ANAPC10Q9UM13 185 aa10.52□□□□□ -0.73
PTPRN2-203ENST00000389418 IFI27P40305 119 aaPredicted RBP10.52□□□□□ -0.73
PTPRN2-203ENST00000389418 WDR86Q86TI4 376 aa10.52□□□□□ -0.73
PTPRN2-203ENST00000389418 LIME1Q9H400 295 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms