RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 TTC29Q8NA56 475 aaPredicted RBP-4.04□□□□□ -3.06
RNU6-1340P-201ENST00000384438 C12orf43Q96C57 262 aaKnown RBP-4.04□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ARL5BQ96KC2 179 aa-4.04□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SEC62Q99442 399 aaKnown RBP-4.04□□□□□ -3.06
RNU6-1340P-201ENST00000384438 UXTQ9UBK9 157 aaPredicted RBP-4.04□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ERGIC3Q9Y282 383 aa-4.04□□□□□ -3.06
RNU6-1340P-201ENST00000384438 NDUFAF1Q9Y375 327 aa-4.04□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ARL5AQ9Y689 179 aa-4.04□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ABCC4O15439 1325 aa-4.04□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SCN11AQ9UI33 1791 aa-4.04□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SYNJ1O43426 1573 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 MAST1Q9Y2H9 1570 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 LRP5O75197 1615 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SHROOM2Q13796 1616 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TRBV10-1A0A0K0K1A3 114 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 A0A1W2PPE3 182 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CCL22O00626 93 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CDC42EP2O14613 210 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TMEM50AO95807 157 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 HBE1P02100 147 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ATP5G1P05496 136 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 IFNA8P32881 189 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 RAB13P51153 203 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 UBE2BP63146 152 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 IFITM2Q01629 132 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 STK4Q13043 487 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TNFAIP8L2Q6P589 184 aaPredicted RBP-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 FAM183BPQ6ZVS7 135 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CMC1Q7Z7K0 106 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 BPIFA4PQ86YQ2 179 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CCDC89Q8N998 374 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 MS4A6EQ96DS6 147 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 EEF2KMTQ96G04 330 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 DIRAS2Q96HU8 199 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 OR4C12Q96R67 309 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 LINC00467Q9BRT7 94 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 COPS4Q9BT78 406 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ATG5Q9H1Y0 275 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 OR51M1Q9H341 326 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 NDUFA4L2Q9NRX3 87 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SNX5Q9Y5X3 404 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 USP47Q96K76 1375 aa-4.05□□□□□ -3.06
RNU6-1340P-201ENST00000384438 PIK3C2BO00750 1634 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ECM29Q5VYK3 1845 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 C1orf232A0A0U1RR37 186 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 KBTBD11-OT1A0A1B0GTJ5 212 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TMEM30CPA0ZSE6 113 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 AZIN1O14977 448 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ARPC5O15511 151 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 FADS2O95864 444 aaKnown RBP-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 HSMCR30P0CW71 290 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 GADD45AP24522 165 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SDC4P31431 198 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 DEKP35659 375 aaKnown RBP-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 RPS24P62847 133 aaKnown RBP-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 HIST1H3AP68431 136 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SPANXN3Q5MJ09 141 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 HIST2H3PS2Q5TEC6 136 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 IZUMO2Q6UXV1 221 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 HIST2H3AQ71DI3 136 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 S100A7AQ86SG5 101 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CMTM1Q8IZ96 169 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 DEFB106AQ8N104 65 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 OR7G2Q8NG99 324 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 OR13C4Q8NGS5 318 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 DTD1Q8TEA8 209 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 COX7B2Q8TF08 81 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CCDC126Q96EE4 140 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 FER1L6-AS2Q96M78 137 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 RAB1BQ9H0U4 201 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 GPR84Q9NQS5 396 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 LIPT1Q9Y234 373 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 MED1Q15648 1581 aaPredicted RBP-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 VPS13AQ96RL7 3174 aa-4.06□□□□□ -3.06
RNU6-1340P-201ENST00000384438 MYO5AQ9Y4I1 1855 aaKnown RBP-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 HCG22E2RYF7 251 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 C17orf112F2Z3M2 114 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 I3L3M4 83 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 COX7A2LO14548 114 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 MRASO14807 208 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CASQ1P31415 396 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TAS2R39P59534 338 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 POLR2GP62487 172 aaKnown RBP eCLIP-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 DYNLT1P63172 113 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TSNQ15631 228 aaKnown RBP-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 AKR1C8PQ5T2L2 129 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SLC35D2Q76EJ3 337 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 NELFCDQ8IXH7 590 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 HIST3H2BBQ8N257 126 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TTC9CQ8N5M4 171 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SPERTQ8NA61 448 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SPC24Q8NBT2 197 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 OR5A2Q8NGI9 324 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 RNASE7Q9H1E1 156 aaKnown RBP-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 EMC3Q9P0I2 261 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ANXA10Q9UJ72 324 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 PTPRMP28827 1452 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 C4AP0C0L4 1744 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 C4BP0C0L5 1744 aa-4.07□□□□□ -3.06
RNU6-1340P-201ENST00000384438 A0A0U1RQV5 110 aa-4.08□□□□□ -3.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms