RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 DPM2O94777 84 aa12.14□□□□□ -0.47
SNPH-202ENST00000381873 SRSF3P84103 164 aaKnown RBP12.14□□□□□ -0.47
SNPH-202ENST00000381873 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
SNPH-202ENST00000381873 DTX1Q86Y01 620 aa12.14□□□□□ -0.47
SNPH-202ENST00000381873 RCHY1Q96PM5 261 aa12.14□□□□□ -0.47
SNPH-202ENST00000381873 VGLL1Q99990 258 aa12.14□□□□□ -0.47
SNPH-202ENST00000381873 PRADC1Q9BSG0 188 aa12.14□□□□□ -0.47
SNPH-202ENST00000381873 GSN-AS1Q9NRJ2 163 aa12.14□□□□□ -0.47
SNPH-202ENST00000381873 ZNF415Q09FC8 603 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 MGST2Q99735 147 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 NDPQ00604 133 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 ADARB2-AS1A8MUL3 147 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 EVI2AP22794 236 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 QRFPP83859 136 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 LINC00477Q96M19 166 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 RNF114Q9Y508 228 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 MSMBP08118 114 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 GATA3P23771 443 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 C1QTNF4Q9BXJ3 329 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 WNK1Q9H4A3 2382 aa12.13□□□□□ -0.47
SNPH-202ENST00000381873 FCN3O75636 299 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 PRB4P10163 310 aaPredicted RBP12.12□□□□□ -0.47
SNPH-202ENST00000381873 RPL36AP83881 106 aaKnown RBP12.12□□□□□ -0.47
SNPH-202ENST00000381873 DEFB121Q5J5C9 76 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 RPL36ALQ969Q0 106 aaKnown RBP12.12□□□□□ -0.47
SNPH-202ENST00000381873 IFI27L1Q96BM0 104 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 RNF223E7ERA6 249 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 SLC25A20O43772 301 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 PLNP26678 52 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 C1QL4Q86Z23 238 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 RFNGQ9Y644 331 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 CSPG4Q6UVK1 2322 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 ZGRF1Q86YA3 2104 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 C21orf62-AS1Q17RA5 79 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 ASCL4Q6XD76 172 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 RHPN1-AS1Q9BWJ2 59 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 KIAA1671Q9BY89 1806 aa12.12□□□□□ -0.47
SNPH-202ENST00000381873 NTF4P34130 210 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 ACTL10Q5JWF8 245 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 TRGV1A0A0A0MS02 117 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 LINC00205P59089 165 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
SNPH-202ENST00000381873 ITGB1BP1O14713 200 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 GZMBP10144 247 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 FAM223BA6NKX1 122 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 ZNF562Q6V9R5 426 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 FAM223AQ8IWN6 122 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 C3orf56Q8N813 242 aa12.11□□□□□ -0.47
SNPH-202ENST00000381873 A0A1B0GV90 55 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 IGKV1-16P04430 117 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 RPRMLQ8N4K4 120 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 ZNF581Q9P0T4 197 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 TRBV24-1A0A075B6N3 115 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 LYPD1Q8N2G4 141 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 TMEM86BQ8N661 226 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 LINC00469Q8N7U9 141 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 SRSF8Q9BRL6 282 aaKnown RBP12.1□□□□□ -0.47
SNPH-202ENST00000381873 TRAV12-3A0A0B4J271 114 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 LCN12Q6JVE5 192 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 NIT1Q86X76 327 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 TMEM242Q9NWH2 141 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 OVOL3O00110 214 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 RNASE2P10153 161 aaKnown RBP12.1□□□□□ -0.47
SNPH-202ENST00000381873 UBE2E1P51965 193 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 CYTL1Q9NRR1 136 aa12.1□□□□□ -0.47
SNPH-202ENST00000381873 RPL35AP18077 110 aaKnown RBP12.09□□□□□ -0.47
SNPH-202ENST00000381873 CHCHD1Q96BP2 118 aaKnown RBP12.09□□□□□ -0.47
SNPH-202ENST00000381873 RSPO3Q9BXY4 272 aaPredicted RBP12.09□□□□□ -0.47
SNPH-202ENST00000381873 DAZ1Q9NQZ3 744 aaKnown RBP12.09□□□□□ -0.47
SNPH-202ENST00000381873 C15orf62A8K5M9 175 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
SNPH-202ENST00000381873 PRSS33Q8NF86 280 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 PRO3102Q9H379 93 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 CHTOPQ9Y3Y2 248 aaKnown RBP12.09□□□□□ -0.47
SNPH-202ENST00000381873 TRAV9-2A0A087WT02 112 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 TYMSP04818 313 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 SPCS1Q9Y6A9 102 aa12.09□□□□□ -0.47
SNPH-202ENST00000381873 CEACAM8P31997 349 aaPredicted RBP12.08□□□□□ -0.48
SNPH-202ENST00000381873 Q8TAT8 98 aa12.08□□□□□ -0.48
SNPH-202ENST00000381873 NOTCH4Q99466 2003 aa12.08□□□□□ -0.48
SNPH-202ENST00000381873 A0A0U1RRA0 63 aa12.08□□□□□ -0.48
SNPH-202ENST00000381873 FOXL1Q12952 345 aa12.08□□□□□ -0.48
SNPH-202ENST00000381873 UBE2DNLQ8IWF7 75 aa12.08□□□□□ -0.48
SNPH-202ENST00000381873 BEND2Q8NDZ0 799 aa12.08□□□□□ -0.48
SNPH-202ENST00000381873 Q5PR19 223 aa12.08□□□□□ -0.48
SNPH-202ENST00000381873 LYZL1Q6UWQ5 148 aa12.08□□□□□ -0.48
SNPH-202ENST00000381873 C5orf30Q96GV9 206 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms