RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 TRBV7-1A0A0A6YYK4 115 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 IGHG2P01859 326 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 SNRPCP09234 159 aaKnown RBP14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 S100A7P31151 101 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 GNG5P63218 68 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 OR5I1Q13606 314 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 LYPD1Q8N2G4 141 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 MBD6Q96DN6 1003 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 ZNF414Q96IQ9 312 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 V9GYV3 84 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 MAP1AP78559 2803 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 NOTCH2Q04721 2471 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 FAM223BA6NKX1 122 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 AP4M1O00189 453 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 ERVFC1-1P60608 527 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 LY6EQ16553 131 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 FAM223AQ8IWN6 122 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 LINC00479Q96M42 142 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 CCDC140Q96MF4 163 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 CSMD1Q96PZ7 3565 aa14.01□□□□□ -0.17
HLA-DQB1-201ENST00000374943 MYO9AB2RTY4 2548 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 RNF223E7ERA6 249 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 H3BUA1 57 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 TCRAP04437 139 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 IGHV4-31P0DP07 118 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 GPR183P32249 361 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 PDE6HQ13956 83 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 SMUG1Q53HV7 270 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 Q5PR19 223 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 FMC1Q96HJ9 113 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 RABAC1Q9UI14 185 aa14□□□□□ -0.17
HLA-DQB1-201ENST00000374943 CELSR1Q9NYQ6 3014 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 H3BTX0 84 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 BMPR1BO00238 502 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST1H2BKO60814 126 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 TGFAP01135 160 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 FSHBP01225 129 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST1H2BJP06899 126 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST1H2BOP23527 126 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST1H2BBP33778 126 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST1H2BDP58876 126 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 UBE2G1P62253 170 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST1H2BCP62807 126 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST2H2BEQ16778 126 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 PRSS57Q6UWY2 283 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 FAM231DQ6ZW35 169 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 BAGE2Q86Y30 109 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 BCL6BQ8N143 479 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST1H2BHQ93079 126 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST1H2BNQ99877 126 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 HIST1H2BMQ99879 126 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 CSPG4Q6UVK1 2322 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 UNC79Q9P2D8 2635 aa13.99□□□□□ -0.17
HLA-DQB1-201ENST00000374943 CLEC3BP05452 202 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 SIGLEC15Q6ZMC9 328 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 FRZBQ92765 325 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 ZFAND3Q9H8U3 227 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 ZNF580Q9UK33 172 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 ABCA12Q86UK0 2595 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 TRAV34A0A0B4J273 112 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 TRBV6-1A0A0K0K1D8 114 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 SLC17A3O00476 420 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 MGST1P10620 155 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 ATP5G2Q06055 141 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 RPEL1Q2QD12 228 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 C9orf152Q5JTZ5 239 aa13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 IBA57Q5T440 356 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB1-201ENST00000374943 TRGC1P0CF51 173 aa13.97□□□□□ -0.17
HLA-DQB1-201ENST00000374943 RPL7P18124 248 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-201ENST00000374943 FABP9Q0Z7S8 132 aa13.97□□□□□ -0.17
HLA-DQB1-201ENST00000374943 ACTL10Q5JWF8 245 aa13.97□□□□□ -0.17
HLA-DQB1-201ENST00000374943 TOMM20LQ6UXN7 152 aa13.97□□□□□ -0.17
HLA-DQB1-201ENST00000374943 GPR82Q96P67 336 aa13.97□□□□□ -0.17
HLA-DQB1-201ENST00000374943 MS4A10Q96PG2 267 aa13.97□□□□□ -0.17
HLA-DQB1-201ENST00000374943 RNASE7Q9H1E1 156 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-201ENST00000374943 LTAP01374 205 aa13.96□□□□□ -0.17
HLA-DQB1-201ENST00000374943 PPIFP30405 207 aaKnown RBP13.96□□□□□ -0.17
HLA-DQB1-201ENST00000374943 CLEC19AQ6UXS0 136 aa13.96□□□□□ -0.17
HLA-DQB1-201ENST00000374943 C9orf139Q6ZV77 190 aa13.96□□□□□ -0.17
HLA-DQB1-201ENST00000374943 KRTAP1-3Q8IUG1 177 aa13.96□□□□□ -0.17
HLA-DQB1-201ENST00000374943 CMTM2Q8TAZ6 248 aa13.96□□□□□ -0.17
HLA-DQB1-201ENST00000374943 MLST8Q9BVC4 326 aa13.96□□□□□ -0.17
HLA-DQB1-201ENST00000374943 ZFHX3Q15911 3703 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 CSMD2Q7Z408 3487 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 ZNF320A2RRD8 509 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 RAB9AP51151 201 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 RPL15P61313 204 aaKnown RBP13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 DEFB112Q30KQ8 113 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 EXOC3-AS1Q8N2X6 119 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 MAPK1IP1LQ8NDC0 245 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 C17orf77Q96MU5 243 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 RPH3ALQ9UNE2 315 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 CREBBPQ92793 2442 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 APCP25054 2843 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 TRGV3P03979 118 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 RELQ04864 619 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 NHLRC2Q8NBF2 726 aa13.95□□□□□ -0.18
HLA-DQB1-201ENST00000374943 ZNF253O75346 499 aa13.94□□□□□ -0.18
HLA-DQB1-201ENST00000374943 HOXA5P20719 270 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms