RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 TRBV6-6A0A0A6YYG2 114 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 EFNB3Q15768 340 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 LCNL1Q6ZST4 164 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 NCOR1P1Q9H4R4 102 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 SIGLEC9Q9Y336 463 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 ARFGEF1Q9Y6D6 1849 aa3.35□□□□□ -1.87
SCN3A-201ENST00000283254 TRBV25-1A0A075B6N4 114 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 TRAV2A0A0B4J234 112 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 A0A1B0GV90 55 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 OVOL3O00110 214 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 TRPT1Q86TN4 253 aaKnown RBP3.34□□□□□ -1.87
SCN3A-201ENST00000283254 GPHA2Q96T91 129 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 DEPPQ9NTK1 212 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 PLXNA1Q9UIW2 1896 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 CLDN16Q9Y5I7 305 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 PATJQ8NI35 1801 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 FNDC10F2Z333 226 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 SERF1AO75920 110 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 ID3Q02535 119 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 GATD1Q8NB37 220 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 GFRA4Q9GZZ7 299 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 IGHG3P01860 377 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 CGB3P0DN86 165 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 EVI2AP22794 236 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 VWC2Q2TAL6 325 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 IGFL3Q6UXB1 125 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 TREML4Q6UXN2 200 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 GLMPQ8WWB7 406 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 LINC01619G3V211 115 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 FGF16O43320 207 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 GNG5P63218 68 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 CD300EQ496F6 205 aaPredicted RBP3.34□□□□□ -1.87
SCN3A-201ENST00000283254 GAGE13Q4V321 117 aa3.34□□□□□ -1.87
SCN3A-201ENST00000283254 FAM110DQ8TAY7 271 aaPredicted RBP3.34□□□□□ -1.87
SCN3A-201ENST00000283254 FAM231BA6NCW3 169 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 A6NNC1 897 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 H3BUT2 72 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 LHBP01229 141 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 TMEM219Q86XT9 240 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 RNF152Q8N8N0 203 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 ANAPC13Q9BS18 74 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 GGTLC1Q9BX51 225 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 ELANEP08246 267 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 TMEM170AQ8WVE7 144 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 IGHV4-39P01824 125 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 MST1LQ2TV78 715 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 GAGE2EQ4V326 116 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 LINC00518Q8N0U6 118 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 C11orf44Q8N8P7 122 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 SHANK2-AS3Q9BTD1 123 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 GAGE2DQ9UEU5 116 aa3.34□□□□□ -1.88
SCN3A-201ENST00000283254 BRWD3Q6RI45 1802 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 MUC21A0A0G2JKD1 596 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 MUC21A0A140T8X8 626 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 RAMP3O60896 148 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 PYYP10082 97 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 SAA4P35542 130 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 CTAG1AP78358 180 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 C1QL2Q7Z5L3 287 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 IL17DQ8TAD2 202 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 Q8TCH9 128 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 RTBDNQ9BSG5 229 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-201ENST00000283254 LRRC37AA6NMS7 1700 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 BUB1B-PAK6H3BSN5 160 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 PFN1P07737 140 aaKnown RBP3.33□□□□□ -1.88
SCN3A-201ENST00000283254 RPL35AP18077 110 aaKnown RBP3.33□□□□□ -1.88
SCN3A-201ENST00000283254 CFPP27918 469 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 YPEL3P61236 119 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-201ENST00000283254 GAGE2BQ13066 116 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 MDS2Q8NDY4 140 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 TMEM141Q96I45 108 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 H0YJW9 148 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 KLF5Q13887 457 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-201ENST00000283254 PSG3Q16557 428 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 TMEM256Q8N2U0 113 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 ATP6V0BQ99437 205 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 RPL15P61313 204 aaKnown RBP3.33□□□□□ -1.88
SCN3A-201ENST00000283254 NMSQ5H8A3 153 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 Q6ZS49 121 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 DYSFO75923 2080 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 NPIPB5A8MRT5 1133 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 H3BUA1 57 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 GATA2P23769 480 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-201ENST00000283254 ATP5G3P48201 142 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 FOXL1Q12952 345 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 TMEM249Q2WGJ8 235 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 BRD3OSQ6XYD6 125 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 RPRMLQ8N4K4 120 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 SPRR3Q9UBC9 169 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 PHF3Q92576 2039 aaKnown RBP3.33□□□□□ -1.88
SCN3A-201ENST00000283254 IGKV3D-20A0A0C4DH25 116 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 PMS2P5A8MQ11 134 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 CRLF1O75462 422 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 FCN3O75636 299 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 C18orf12Q96KH6 178 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 SPXQ9BT56 116 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 LIME1Q9H400 295 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 WDR90Q96KV7 1748 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 TRAV13-1A0A0B4J241 112 aa3.33□□□□□ -1.88
SCN3A-201ENST00000283254 C1QTNF9P0C862 333 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms