RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 RPS11P62280 158 aaKnown RBP eCLIP5.04□□□□□ -1.6
LIN7C-201ENST00000278193 IGHG1P01857 330 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 KIAA0040Q15053 153 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 KLF17Q5JT82 389 aaPredicted RBP5.03□□□□□ -1.6
LIN7C-201ENST00000278193 HMGN2P46Q86SG4 172 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 HDHD3Q9BSH5 251 aaPredicted RBP5.03□□□□□ -1.6
LIN7C-201ENST00000278193 TMEM14AQ9Y6G1 99 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 ZNF106Q9H2Y7 1883 aaKnown RBP5.03□□□□□ -1.6
LIN7C-201ENST00000278193 H3BT86 120 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 HYPMO75409 117 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 PRNTQ86SH4 94 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 RFLNBQ8N5W9 214 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 ZNF645Q8N7E2 425 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 H1FXQ92522 213 aaKnown RBP5.03□□□□□ -1.6
LIN7C-201ENST00000278193 MSRB1Q9NZV6 116 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 CROCCQ5TZA2 2017 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 RP1L1Q8IWN7 2480 aaPredicted RBP5.03□□□□□ -1.6
LIN7C-201ENST00000278193 IGHV3OR16-9A0A0B4J2B5 98 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 T-ENOLP0DO92 83 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 FAM19A4Q96LR4 140 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 K7ENP7 123 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 LINC00271P0C7V0 271 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 NHLRC4P0CG21 123 aaPredicted RBP5.03□□□□□ -1.6
LIN7C-201ENST00000278193 UFSP1Q6NVU6 142 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 C1orf229Q6ZS94 237 aaPredicted RBP5.03□□□□□ -1.6
LIN7C-201ENST00000278193 C10orf105Q8TEF2 133 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 SPTSSAQ969W0 71 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 GNG13Q9P2W3 67 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 DNAJC15Q9Y5T4 150 aa5.03□□□□□ -1.6
LIN7C-201ENST00000278193 DOCK5Q9H7D0 1870 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 MED14OSP0DP75 135 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 COA6Q5JTJ3 125 aaKnown RBP5.02□□□□□ -1.61
LIN7C-201ENST00000278193 TMEM252Q8N6L7 170 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 IMMP2LQ96T52 175 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 NDUFB11Q9NX14 153 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 DENND4AQ7Z401 1863 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 A0A0G2JRQ6 117 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 TRBV12-3P01733 135 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 HLA-DPB1P04440 258 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 IL5P05113 134 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 COX6A1P12074 109 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 RPS27LQ71UM5 84 aaKnown RBP5.02□□□□□ -1.61
LIN7C-201ENST00000278193 MKXQ8IYA7 352 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 OR8B3Q8NGG8 313 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 FAM57AQ8TBR7 257 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 ZNF286AQ9HBT8 521 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 OSTCQ9NRP0 149 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 IL36RNQ9UBH0 155 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 SPTA1P02549 2419 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 CEP350Q5VT06 3117 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 NCOR1O75376 2440 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 A0A0J9YXV3 536 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 IGHA1P01876 353 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 HERVK_113P61574 105 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 ETDBQ3ZM63 59 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 PLEKHF2Q9H8W4 249 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 ZNF638Q14966 1978 aaKnown RBP5.02□□□□□ -1.61
LIN7C-201ENST00000278193 IZUMO1RA6ND01 250 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 LST1O00453 97 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 PGLYRP1O75594 196 aaPredicted RBP5.02□□□□□ -1.61
LIN7C-201ENST00000278193 PRSS1P07477 247 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 S100A7L2Q5SY68 101 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 TNFRSF19Q9NS68 423 aa5.02□□□□□ -1.61
LIN7C-201ENST00000278193 ZNF646O15015 1829 aaPredicted RBP5.01□□□□□ -1.61
LIN7C-201ENST00000278193 PSPHP1O15172 72 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 GYPBP06028 91 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 SPINK2P20155 84 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 RPL23P62829 140 aaKnown RBP5.01□□□□□ -1.61
LIN7C-201ENST00000278193 LGALS9BQ3B8N2 356 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 PYGO2Q9BRQ0 406 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 ZNF688P0C7X2 276 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 DSCR4P56555 118 aaPredicted RBP5.01□□□□□ -1.61
LIN7C-201ENST00000278193 AMN1Q8IY45 258 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 YPEL2Q96QA6 119 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 TNRC6AQ8NDV7 1962 aaKnown RBP5.01□□□□□ -1.61
LIN7C-201ENST00000278193 IGHV4-28A0A0C4DH34 117 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 A8MWL6 223 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 TMEM136Q6ZRR5 245 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 LHFPL1Q86WI0 220 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 GNB4Q9HAV0 340 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 CABIN1Q9Y6J0 2220 aa5.01□□□□□ -1.61
LIN7C-201ENST00000278193 TRBV27A0A0K0K1C4 114 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 A0A1W2PPM0 123 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 C9JQL5 133 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 SDCBPO00560 298 aaPredicted RBP5□□□□□ -1.61
LIN7C-201ENST00000278193 NDUFB2O95178 105 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 CLECL1Q8IZS7 167 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 C17orf77Q96MU5 243 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 TPRP12270 2363 aaKnown RBP5□□□□□ -1.61
LIN7C-201ENST00000278193 TRIP11Q15643 1979 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 TRBV5-3A0A0A0MS03 114 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 DYNLT3P51808 116 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 CRYBA2P53672 197 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 LINC00311Q8N616 119 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 VSIG2Q96IQ7 327 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 PHF3Q92576 2039 aaKnown RBP5□□□□□ -1.61
LIN7C-201ENST00000278193 RIF1Q5UIP0 2472 aaKnown RBP5□□□□□ -1.61
LIN7C-201ENST00000278193 EP300Q09472 2414 aaPredicted RBP5□□□□□ -1.61
LIN7C-201ENST00000278193 BRWD1Q9NSI6 2320 aa5□□□□□ -1.61
LIN7C-201ENST00000278193 TRBV7-6A0A0J9YX20 115 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms