RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 GPR82Q96P67 336 aa10.01□□□□□ -0.81
SNAI1-201ENST00000244050 SLC25A39Q9BZJ4 359 aaPredicted RBP10.01□□□□□ -0.81
SNAI1-201ENST00000244050 SERTAD4Q9NUC0 356 aa10.01□□□□□ -0.81
SNAI1-201ENST00000244050 A0A1B0GUS0 222 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 TOMM40O96008 361 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 HLA-DQA1P01909 254 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 HIST1H1EP10412 219 aaKnown RBP10□□□□□ -0.81
SNAI1-201ENST00000244050 PAX1P15863 534 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 LYZP61626 148 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 ZNF562Q6V9R5 426 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 ZNF600Q6ZNG1 722 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 Q8N6K4 173 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 CMTM2Q8TAZ6 248 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 WIPF2Q8TF74 440 aaPredicted RBP10□□□□□ -0.81
SNAI1-201ENST00000244050 FMC1Q96HJ9 113 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 TMEM68Q96MH6 324 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 TBX15Q96SF7 602 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 MLST8Q9BVC4 326 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 Q9H3A6 140 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 NAT8BQ9UHF3 227 aa10□□□□□ -0.81
SNAI1-201ENST00000244050 GRIFINA4D1Z8 144 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 NPIPB5A8MRT5 1133 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 TSTD3H0UI37 97 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 TCRAP04437 139 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 DSCR9P59020 149 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 LINC00310P59036 64 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 IQCJQ1A5X6 159 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 C9orf152Q5JTZ5 239 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 ZNF48Q96MX3 618 aaPredicted RBP9.99□□□□□ -0.81
SNAI1-201ENST00000244050 RBM14Q96PK6 669 aaKnown RBP9.99□□□□□ -0.81
SNAI1-201ENST00000244050 OTORQ9NRC9 128 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 RNF24Q9Y225 148 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 POLR3KQ9Y2Y1 108 aaPredicted RBP9.99□□□□□ -0.81
SNAI1-201ENST00000244050 TRAV30A0A087WSZ9 112 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 LTAP01374 205 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 SNRPCP09234 159 aaKnown RBP9.99□□□□□ -0.81
SNAI1-201ENST00000244050 FOSL1P15407 271 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 UBE2E1P51965 193 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 TCL1AP56279 114 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 TPPP2P59282 170 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 RAB4BP61018 213 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 HES1Q14469 280 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 OR10J3Q5JRS4 329 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 LEMD1Q68G75 181 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 KRTAP1-3Q8IUG1 177 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 TTC9CQ8N5M4 171 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 SHANK2-AS3Q9BTD1 123 aa9.99□□□□□ -0.81
SNAI1-201ENST00000244050 TBL2Q9Y4P3 447 aaKnown RBP9.99□□□□□ -0.81
SNAI1-201ENST00000244050 IGLV11-55A0A075B6I3 123 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 H3BRN7 92 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 SPINK4O60575 86 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 CD24P25063 80 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 USF2Q15853 346 aaPredicted RBP9.98□□□□□ -0.81
SNAI1-201ENST00000244050 DYNAPQ8N1N2 210 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 ZNF491Q8N8L2 437 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 WFDC11Q8NEX6 87 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 TSKUQ8WUA8 353 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 FANCD2OSQ96PS1 177 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 SMR3AQ99954 134 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 ZNF331Q9NQX6 463 aaPredicted RBP9.98□□□□□ -0.81
SNAI1-201ENST00000244050 ZNF586Q9NXT0 402 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 ZNF492Q9P255 531 aa9.98□□□□□ -0.81
SNAI1-201ENST00000244050 NSD1Q96L73 2696 aaPredicted RBP9.98□□□□□ -0.81
SNAI1-201ENST00000244050 TRBV6-1A0A0K0K1D8 114 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 WI2-2373I1.2A0A1W2PRP0 233 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 SERF1AO75920 110 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 CA1P00915 261 aaPredicted RBP9.97□□□□□ -0.81
SNAI1-201ENST00000244050 DDTP30046 118 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 SLC35B1P78383 322 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 DEFA6Q01524 100 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 FBLN7Q53RD9 439 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 CT83Q5H943 113 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 ASPHD1Q5U4P2 390 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 MRPL54Q6P161 138 aaKnown RBP9.97□□□□□ -0.81
SNAI1-201ENST00000244050 BAGE3Q86Y29 109 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 ZNF664Q8N3J9 261 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 ARPC1AQ92747 370 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 NOL4LQ96MY1 436 aaPredicted RBP9.97□□□□□ -0.81
SNAI1-201ENST00000244050 MS4A10Q96PG2 267 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 FAM103A1Q9BTL3 118 aaKnown RBP9.97□□□□□ -0.81
SNAI1-201ENST00000244050 PRSS22Q9GZN4 317 aa9.97□□□□□ -0.81
SNAI1-201ENST00000244050 BMPR1BO00238 502 aa9.96□□□□□ -0.81
SNAI1-201ENST00000244050 MFAP4P55083 255 aa9.96□□□□□ -0.81
SNAI1-201ENST00000244050 DEFB113Q30KQ7 82 aa9.96□□□□□ -0.81
SNAI1-201ENST00000244050 FAM209BQ5JX69 171 aa9.96□□□□□ -0.81
SNAI1-201ENST00000244050 S100A7AQ86SG5 101 aa9.96□□□□□ -0.81
SNAI1-201ENST00000244050 BPIFA4PQ86YQ2 179 aa9.96□□□□□ -0.81
SNAI1-201ENST00000244050 LYPD1Q8N2G4 141 aa9.96□□□□□ -0.81
SNAI1-201ENST00000244050 NUP35Q8NFH5 326 aa9.96□□□□□ -0.81
SNAI1-201ENST00000244050 PRO1933Q9H354 126 aa9.96□□□□□ -0.81
SNAI1-201ENST00000244050 GNB4Q9HAV0 340 aa9.96□□□□□ -0.81
SNAI1-201ENST00000244050 TRBV19A0A075B6N1 114 aa9.96□□□□□ -0.82
SNAI1-201ENST00000244050 C19orf71A6NCJ1 209 aa9.96□□□□□ -0.82
SNAI1-201ENST00000244050 APCSP02743 223 aa9.96□□□□□ -0.82
SNAI1-201ENST00000244050 SLC25A16P16260 332 aa9.96□□□□□ -0.82
SNAI1-201ENST00000244050 SAA4P35542 130 aa9.96□□□□□ -0.82
SNAI1-201ENST00000244050 PAX8Q06710 450 aa9.96□□□□□ -0.82
SNAI1-201ENST00000244050 PRR27Q6MZM9 219 aa9.96□□□□□ -0.82
SNAI1-201ENST00000244050 ATP5L2Q7Z4Y8 100 aa9.96□□□□□ -0.82
SNAI1-201ENST00000244050 RNF125Q96EQ8 232 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms