RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Lims1Q99JW4 325 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Rps2-ps6A0A140T8L5 221 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Gm20696H3BJN7 74 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Hist1h1eP43274 219 aaKnown RBP7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 C1sbQ8CFG8 688 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Cds2Q99L43 444 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Gm5157A0A087WRH8 301 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Tmem74bA2AU34 232 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 1700015F17RikD3YUK8 150 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 P04214 136 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 SriQ6P069 198 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Obp2aQ8K1H9 176 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 AfmidQ8K4H1 305 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Olfr1324Q8VEU7 332 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 DptQ9QZZ6 201 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Dbx1P52950 335 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Sssca1P56873 199 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Tmem255bQ5FW56 369 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Parp16Q7TMM8 322 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Vkorc1Q9CRC0 161 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Gm37797A0A1D5RLC8 261 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Wnt5aP22725 380 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Evx1P23683 416 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Prss32E9Q409 334 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 A630095N17RikJ3KMM7 116 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 MyogP12979 224 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Zfp747Q8BHM7 422 aa7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Rbms1Q91W59 403 aaKnown RBP7.03□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Thsd7aQ69ZU6 1645 aa7.02□□□□□ -1.28
Scn8a-204ENSMUST00000108909 Aadacl3A2A7Z8 408 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Gm9857F7CXR1 130 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 PtcraP0C6B2 199 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Upk2P38575 184 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Defa23Q5G866 93 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 PnkdQ69ZP3 385 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Olfr1228Q8VGM9 323 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Fam234aQ8C0Z1 555 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Olfr33Q8VGX7 318 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Cml3Q9JIY8 226 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Hide1Q75VT8 222 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Nit1Q8VDK1 323 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Itgbl1Q8VDV0 494 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Carhsp1Q9CR86 148 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Q9DAN9 164 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Rab37Q9JKM7 223 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Fhl5Q9WTX7 284 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Defa7P50705 93 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Tnfrsf8Q60846 498 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Lyzl6Q9DA11 148 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 V1ra8Q9EQ48 279 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Vma21-psA0A140T8R2 101 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Olfr1248A0A1L1SSZ5 307 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Gm10665K7N6B7 321 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 CrxO54751 299 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Foxa3P35584 353 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Bcl2l15Q08ED0 167 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Abhd16bQ80YU0 474 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 LbhQ9CX60 105 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Usp9yF8VPU6 2556 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Tet2Q4JK59 1912 aaKnown RBP7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Smim13E9Q942 88 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Olfr16Q62007 309 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Ceacam9Q78T27 234 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Shisal2bQ9D1Y9 158 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Klk1b26P36369 261 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Olfr91Q7TRL3 312 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Lrrc10Q8K3W2 274 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Derl1Q99J56 251 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Cela3bQ9CQ52 269 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Ly75Q60767 1723 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Ighv5-17A0A075B5R1 117 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Pcbp4P57724 403 aaKnown RBP7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Herpud1Q9JJK5 391 aa7.02□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Olfr905L7N1X5 310 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Ifitm5O88728 134 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Defa4P28311 92 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Guca2aP33680 116 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 OsmP53347 263 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Olfr1362Q5SZZ8 308 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 TskuQ8CBR6 354 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Rnf39A2RT81 352 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Omt2bD3YX29 119 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Olfr978E9Q985 311 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Saa2P05367 122 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 B4galt1P15535 399 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 TgfaP48030 159 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 NotoQ5TIS6 240 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Prickle3Q80VL3 624 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Cypt1Q8CH20 168 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Ndfip1Q8R0W6 221 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Prss21Q9JHJ7 324 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 BC025446A0A087WQT1 134 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Gm12886B1AZM5 119 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Myoz1Q9JK37 296 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Igkv12-38A0A0G2JEI7 115 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Gstp1P19157 210 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Defa20Q45VN2 95 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Tmem140Q8BGY5 185 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Plppr5Q8BJ52 321 aa7.01□□□□□ -1.29
Scn8a-204ENSMUST00000108909 Eva1aQ91WM6 156 aa7.01□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 103.8 ms