RNA–Protein interactions for RNA: tP(AGG)C

SUF2, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene SUF2, Length 72 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUF2tP(AGG)C RTA1P53047 317 aa12.86□□□□□ -0.35
SUF2tP(AGG)C VPS9P54787 451 aa12.86□□□□□ -0.35
SUF2tP(AGG)C YMR027WQ04371 470 aa12.86□□□□□ -0.35
SUF2tP(AGG)C AIM32Q04689 311 aa12.86□□□□□ -0.35
SUF2tP(AGG)C PMT7Q06644 662 aa12.86□□□□□ -0.35
SUF2tP(AGG)C UBR2Q07963 1872 aa12.86□□□□□ -0.35
SUF2tP(AGG)C CDC24P11433 854 aaPredicted RBP12.85□□□□□ -0.35
SUF2tP(AGG)C POL3P15436 1097 aa12.85□□□□□ -0.35
SUF2tP(AGG)C DSS4P32601 143 aa12.85□□□□□ -0.35
SUF2tP(AGG)C ECM32P32644 1121 aaKnown RBP12.85□□□□□ -0.35
SUF2tP(AGG)C RFS1P38234 210 aaKnown RBP12.85□□□□□ -0.35
SUF2tP(AGG)C AIM18P38884 321 aa12.85□□□□□ -0.35
SUF2tP(AGG)C CCT2P39076 527 aaKnown RBP12.85□□□□□ -0.35
SUF2tP(AGG)C FHL1P39521 936 aa12.85□□□□□ -0.35
SUF2tP(AGG)C RAD26P40352 1085 aa12.85□□□□□ -0.35
SUF2tP(AGG)C PRK1P40494 810 aa12.85□□□□□ -0.35
SUF2tP(AGG)C YJL132WP47014 750 aa12.85□□□□□ -0.35
SUF2tP(AGG)C KTR6P54070 446 aa12.85□□□□□ -0.35
SUF2tP(AGG)C BET4Q00618 327 aa12.85□□□□□ -0.35
SUF2tP(AGG)C CEG1Q01159 459 aaPredicted RBP12.85□□□□□ -0.35
SUF2tP(AGG)C EAR1Q03212 550 aa12.85□□□□□ -0.35
SUF2tP(AGG)C SPO71Q03868 1245 aa12.85□□□□□ -0.35
SUF2tP(AGG)C SPG3Q04398 127 aaPredicted RBP12.85□□□□□ -0.35
SUF2tP(AGG)C EMI2Q04409 500 aaKnown RBP12.85□□□□□ -0.35
SUF2tP(AGG)C RRD2Q12461 358 aa12.85□□□□□ -0.35
SUF2tP(AGG)C EFG1Q3E705 233 aaKnown RBP12.85□□□□□ -0.35
SUF2tP(AGG)C PEP7P32609 515 aa12.84□□□□□ -0.35
SUF2tP(AGG)C HSP78P33416 811 aa12.84□□□□□ -0.35
SUF2tP(AGG)C DUG2P38149 878 aa12.84□□□□□ -0.35
SUF2tP(AGG)C SAP1P39955 897 aaKnown RBP12.84□□□□□ -0.35
SUF2tP(AGG)C SVS1Q12254 260 aa12.84□□□□□ -0.35
SUF2tP(AGG)C AVL9Q12500 764 aa12.84□□□□□ -0.35
SUF2tP(AGG)C PAB1P04147 577 aaKnown RBP RIP-Chip data12.83□□□□□ -0.36not detected
SUF2tP(AGG)C ILV6P25605 309 aaKnown RBP12.83□□□□□ -0.36
SUF2tP(AGG)C YIH1P25637 258 aa12.83□□□□□ -0.36
SUF2tP(AGG)C GCS1P35197 352 aa12.83□□□□□ -0.36
SUF2tP(AGG)C MSR1P38714 643 aa12.83□□□□□ -0.36
SUF2tP(AGG)C SCC4P40090 624 aa12.83□□□□□ -0.36
SUF2tP(AGG)C MKT1P40850 830 aaKnown RBP12.83□□□□□ -0.36
SUF2tP(AGG)C PNG1Q02890 363 aa12.83□□□□□ -0.36
SUF2tP(AGG)C PNP1Q05788 311 aa12.83□□□□□ -0.36
SUF2tP(AGG)C GRX8Q05926 109 aa12.83□□□□□ -0.36
SUF2tP(AGG)C AAD15Q08361 143 aa12.83□□□□□ -0.36
SUF2tP(AGG)C SPE3Q12074 293 aaKnown RBP12.83□□□□□ -0.36
SUF2tP(AGG)C YLR422WQ06409 1932 aa12.82□□□□□ -0.36
SUF2tP(AGG)C CMD1P06787 147 aaKnown RBP12.82□□□□□ -0.36
SUF2tP(AGG)C YCR015CP25616 317 aa12.82□□□□□ -0.36
SUF2tP(AGG)C GPI10P30777 616 aa12.82□□□□□ -0.36
SUF2tP(AGG)C YBR056WP38081 501 aa12.82□□□□□ -0.36
SUF2tP(AGG)C FSH1P38777 243 aaKnown RBP12.82□□□□□ -0.36
SUF2tP(AGG)C LAM1P38851 1228 aa12.82□□□□□ -0.36
SUF2tP(AGG)C NMD3P38861 518 aaKnown RBP12.82□□□□□ -0.36
SUF2tP(AGG)C SMX2P40204 77 aaKnown RBP12.82□□□□□ -0.36
SUF2tP(AGG)C BTT1P40314 149 aaPredicted RBP12.82□□□□□ -0.36
SUF2tP(AGG)C GPM3Q12326 303 aa12.82□□□□□ -0.36
SUF2tP(AGG)C TAO3P40468 2376 aa12.82□□□□□ -0.36
SUF2tP(AGG)C HIS1P00498 297 aaKnown RBP12.81□□□□□ -0.36
SUF2tP(AGG)C RPB2P08518 1224 aaKnown RBP12.81□□□□□ -0.36
SUF2tP(AGG)C IMA3P0CW40 589 aa12.81□□□□□ -0.36
SUF2tP(AGG)C IMA4P0CW41 589 aa12.81□□□□□ -0.36
SUF2tP(AGG)C CBF1P17106 351 aa12.81□□□□□ -0.36
SUF2tP(AGG)C KAR4P25583 335 aa12.81□□□□□ -0.36
SUF2tP(AGG)C BIT2P38346 545 aa12.81□□□□□ -0.36
SUF2tP(AGG)C SAE2P46946 345 aa12.81□□□□□ -0.36
SUF2tP(AGG)C CTK3P46963 296 aaPredicted RBP12.81□□□□□ -0.36
SUF2tP(AGG)C URB2P47108 1174 aa12.81□□□□□ -0.36
SUF2tP(AGG)C ECM22Q05958 814 aaPredicted RBP12.81□□□□□ -0.36
SUF2tP(AGG)C IMA2Q08295 589 aa12.81□□□□□ -0.36
SUF2tP(AGG)C HOS1Q12214 470 aa12.81□□□□□ -0.36
SUF2tP(AGG)C ARG4P04076 463 aaPredicted RBP12.8□□□□□ -0.36
SUF2tP(AGG)C DAL1P32375 460 aa12.8□□□□□ -0.36
SUF2tP(AGG)C YKR051WP36142 418 aa12.8□□□□□ -0.36
SUF2tP(AGG)C FUI1P38196 639 aa12.8□□□□□ -0.36
SUF2tP(AGG)C YBR225WP38321 900 aa12.8□□□□□ -0.36
SUF2tP(AGG)C STL1P39932 569 aa12.8□□□□□ -0.36
SUF2tP(AGG)C YJR079WP47126 109 aa12.8□□□□□ -0.36
SUF2tP(AGG)C HIP1P06775 603 aa12.79□□□□□ -0.36
SUF2tP(AGG)C MET16P18408 261 aaPredicted RBP12.79□□□□□ -0.36
SUF2tP(AGG)C HXT3P32466 567 aaKnown RBP12.79□□□□□ -0.36
SUF2tP(AGG)C PEX5P35056 612 aa12.79□□□□□ -0.36
SUF2tP(AGG)C SQT1P35184 431 aa12.79□□□□□ -0.36
SUF2tP(AGG)C KES1P35844 434 aaKnown RBP12.79□□□□□ -0.36
SUF2tP(AGG)C FMP10P40098 244 aa12.79□□□□□ -0.36
SUF2tP(AGG)C RRT5P43607 289 aa12.79□□□□□ -0.36
SUF2tP(AGG)C ALY2P47029 1046 aa12.79□□□□□ -0.36
SUF2tP(AGG)C IML2P47031 731 aa12.79□□□□□ -0.36
SUF2tP(AGG)C RTT101P47050 842 aa12.79□□□□□ -0.36
SUF2tP(AGG)C MRX6P48564 524 aa12.79□□□□□ -0.36
SUF2tP(AGG)C KTR5P53966 522 aaPredicted RBP12.79□□□□□ -0.36
SUF2tP(AGG)C GCN5Q03330 439 aa12.79□□□□□ -0.36
SUF2tP(AGG)C YLR257WQ06146 321 aaKnown RBP12.79□□□□□ -0.36
SUF2tP(AGG)C NRT1Q08485 598 aa12.79□□□□□ -0.36
SUF2tP(AGG)C HEM15P16622 393 aa12.78□□□□□ -0.36
SUF2tP(AGG)C TPS2P31688 896 aaKnown RBP12.78□□□□□ -0.36
SUF2tP(AGG)C PEX2P32800 271 aa12.78□□□□□ -0.36
SUF2tP(AGG)C MAC1P35192 417 aa12.78□□□□□ -0.36
SUF2tP(AGG)C OAF3P36023 863 aa12.78□□□□□ -0.36
SUF2tP(AGG)C ECM13P38195 257 aa12.78□□□□□ -0.36
SUF2tP(AGG)C OTU2P38747 307 aaKnown RBP12.78□□□□□ -0.36
SUF2tP(AGG)C REV7P38927 245 aa12.78□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms