RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR52, Length 92 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR52snR52 IMG2P25642 146 aaPredicted RBP1.72□□□□□ -2.13
snR52snR52 TOM71P38825 639 aaKnown RBP1.72□□□□□ -2.13
snR52snR52 TMN3P40071 706 aa1.72□□□□□ -2.13
snR52snR52 YGR054WP53235 642 aaKnown RBP1.72□□□□□ -2.13
snR52snR52 VTC3Q02725 835 aa1.72□□□□□ -2.13
snR52snR52 MFM1Q02783 413 aa1.72□□□□□ -2.13
snR52snR52 VBA4Q04602 768 aaKnown RBP1.72□□□□□ -2.13
snR52snR52 VHS3Q08438 674 aa1.72□□□□□ -2.13
snR52snR52 ATX2Q12067 313 aa1.72□□□□□ -2.13
snR52snR52 WRS1Q12109 432 aaKnown RBP1.72□□□□□ -2.13
snR52snR52 CIT2P08679 460 aa1.71□□□□□ -2.14
snR52snR52 SEC15P22224 910 aa1.71□□□□□ -2.14
snR52snR52 MAK32P23060 363 aa1.71□□□□□ -2.14
snR52snR52 LOT5P34234 306 aa1.71□□□□□ -2.14
snR52snR52 BRN1P38170 754 aa1.71□□□□□ -2.14
snR52snR52 YHR202WP38887 602 aa1.71□□□□□ -2.14
snR52snR52 BUD8P41698 603 aa1.71□□□□□ -2.14
snR52snR52 YJL049WP47048 450 aa1.71□□□□□ -2.14
snR52snR52 GFD1Q04839 188 aaKnown RBP1.71□□□□□ -2.14
snR52snR52 PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
snR52snR52 GAL11P19659 1081 aa1.7□□□□□ -2.14
snR52snR52 PRP22P24384 1145 aaKnown RBP1.7□□□□□ -2.14
snR52snR52 PPE1P38796 400 aa1.7□□□□□ -2.14
snR52snR52 FAA2P39518 744 aa1.7□□□□□ -2.14
snR52snR52 YIR016WP40572 265 aa1.7□□□□□ -2.14
snR52snR52 WAR1Q03631 944 aa1.7□□□□□ -2.14
snR52snR52 MRN1Q08925 612 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
snR52snR52 YPL216WQ08964 1102 aa1.7□□□□□ -2.14
snR52snR52 GAL4P04386 881 aa1.69□□□□□ -2.14
snR52snR52 YKU70P32807 602 aa1.69□□□□□ -2.14
snR52snR52 CCL1P37366 393 aa1.69□□□□□ -2.14
snR52snR52 IMP4P53941 290 aaKnown RBP1.69□□□□□ -2.14
snR52snR52 YPL071CQ02864 156 aa1.69□□□□□ -2.14
snR52snR52 COG8Q04632 607 aa1.69□□□□□ -2.14
snR52snR52 YMR034CQ05131 434 aaPredicted RBP1.69□□□□□ -2.14
snR52snR52 TGS1Q12052 315 aa1.69□□□□□ -2.14
snR52snR52 GET3Q12154 354 aaKnown RBP1.69□□□□□ -2.14
snR52snR52 SRD1P09007 221 aa1.68□□□□□ -2.14
snR52snR52 HMG1P12683 1054 aa1.68□□□□□ -2.14
snR52snR52 CAP1P28495 268 aaKnown RBP1.68□□□□□ -2.14
snR52snR52 PRE4P30657 266 aa1.68□□□□□ -2.14
snR52snR52 RPT3P33298 428 aaKnown RBP1.68□□□□□ -2.14
snR52snR52 CDS1P38221 457 aa1.68□□□□□ -2.14
snR52snR52 EXO84P38261 753 aa1.68□□□□□ -2.14
snR52snR52 CRG1P38892 291 aaRIP-Chip data1.68□□□□□ -2.14not detected
snR52snR52 DHH1P39517 506 aaKnown RBP1.68□□□□□ -2.14
snR52snR52 FTR1P40088 404 aa1.68□□□□□ -2.14
snR52snR52 TIM50Q02776 476 aa1.68□□□□□ -2.14
snR52snR52 YPS7Q06325 596 aa1.68□□□□□ -2.14
snR52snR52 CYK3Q07533 885 aa1.68□□□□□ -2.14
snR52snR52 MEF1P25039 761 aa1.67□□□□□ -2.14
snR52snR52 PPZ1P26570 692 aa1.67□□□□□ -2.14
snR52snR52 DHR2P36009 735 aaPredicted RBP1.67□□□□□ -2.14
snR52snR52 YND1P40009 630 aa1.67□□□□□ -2.14
snR52snR52 YIL169CP40442 995 aa1.67□□□□□ -2.14
snR52snR52 YIL092WP40497 633 aa1.67□□□□□ -2.14
snR52snR52 AZF1P41696 914 aa1.67□□□□□ -2.14
snR52snR52 HUL5P53119 910 aa1.67□□□□□ -2.14
snR52snR52 GPD1Q00055 391 aaKnown RBP1.67□□□□□ -2.14
snR52snR52 ATG33Q06485 197 aa1.67□□□□□ -2.14
snR52snR52 ARR3Q06598 404 aa1.67□□□□□ -2.14
snR52snR52 BSC6Q08280 497 aa1.67□□□□□ -2.14
snR52snR52 PNO1Q99216 274 aaKnown RBP1.67□□□□□ -2.14
snR52snR52 AAC1P04710 309 aa1.66□□□□□ -2.14
snR52snR52 FTH1P38310 465 aa1.66□□□□□ -2.14
snR52snR52 IMD2P38697 523 aaKnown RBP1.66□□□□□ -2.14
snR52snR52 PXA1P41909 870 aa1.66□□□□□ -2.14
snR52snR52 IMD3P50095 523 aaKnown RBP1.66□□□□□ -2.14
snR52snR52 YNL092WP53934 400 aa1.66□□□□□ -2.14
snR52snR52 PPN1Q04119 674 aa1.66□□□□□ -2.14
snR52snR52 YLR407WQ06070 228 aa1.66□□□□□ -2.14
snR52snR52 STP4Q07351 490 aa1.66□□□□□ -2.14
snR52snR52 PRP16P15938 1071 aaPredicted RBP1.65□□□□□ -2.15
snR52snR52 MTC7P32633 139 aa1.65□□□□□ -2.15
snR52snR52 TIF3P34167 436 aaKnown RBP1.65□□□□□ -2.15
snR52snR52 PCM1P38628 557 aaKnown RBP1.65□□□□□ -2.15
snR52snR52 VRG4P40107 337 aa1.65□□□□□ -2.15
snR52snR52 LRO1P40345 661 aa1.65□□□□□ -2.15
snR52snR52 CIN1P40987 1014 aa1.65□□□□□ -2.15
snR52snR52 BET4Q00618 327 aa1.65□□□□□ -2.15
snR52snR52 ARA2Q04212 335 aa1.65□□□□□ -2.15
snR52snR52 ECM16Q04217 1267 aaKnown RBP1.65□□□□□ -2.15
snR52snR52 TLG2Q08144 397 aa1.65□□□□□ -2.15
snR52snR52 RSA1Q08932 381 aa1.65□□□□□ -2.15
snR52snR52 BI2P03873 423 aa1.64□□□□□ -2.15
snR52snR52 SWI6P09959 803 aa1.64□□□□□ -2.15
snR52snR52 CDC23P16522 626 aa1.64□□□□□ -2.15
snR52snR52 PCL2P25693 308 aa1.64□□□□□ -2.15
snR52snR52 MAL31P38156 614 aa1.64□□□□□ -2.15
snR52snR52 FCP1Q03254 732 aa1.64□□□□□ -2.15
snR52snR52 NSE5Q03718 556 aa1.64□□□□□ -2.15
snR52snR52 SNU56Q03782 492 aaKnown RBP1.64□□□□□ -2.15
snR52snR52 YLR281CQ05863 155 aa1.64□□□□□ -2.15
snR52snR52 GSY1P23337 708 aa1.63□□□□□ -2.15
snR52snR52 RKM3P38222 552 aa1.63□□□□□ -2.15
snR52snR52 PRM2P40534 656 aa1.63□□□□□ -2.15
snR52snR52 YDL183CP48569 320 aa1.63□□□□□ -2.15
snR52snR52 YMR210WQ03649 449 aa1.63□□□□□ -2.15
snR52snR52 RAD33Q04231 177 aa1.63□□□□□ -2.15
snR52snR52 AHA1Q12449 350 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms