RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C CCT5P40413 562 aaKnown RBP2.03□□□□□ -2.08
NIP100YPL174C COQ6P53318 479 aa2.03□□□□□ -2.08
NIP100YPL174C HOL1P53389 586 aa2.03□□□□□ -2.08
NIP100YPL174C YNR029CP53729 429 aaKnown RBP2.03□□□□□ -2.08
NIP100YPL174C EFR3Q03653 782 aaKnown RBP2.03□□□□□ -2.08
NIP100YPL174C PRE4P30657 266 aa2.03□□□□□ -2.09
NIP100YPL174C TMT1P32643 299 aa2.03□□□□□ -2.09
NIP100YPL174C MRPL7P36519 292 aa2.03□□□□□ -2.09
NIP100YPL174C EHT1P38295 451 aa2.03□□□□□ -2.09
NIP100YPL174C LTP1P40347 161 aa2.03□□□□□ -2.09
NIP100YPL174C HOS1Q12214 470 aa2.03□□□□□ -2.09
NIP100YPL174C ICT1Q12385 394 aa2.03□□□□□ -2.09
NIP100YPL174C TUF1P02992 437 aaKnown RBP2.02□□□□□ -2.09
NIP100YPL174C CPA2P03965 1118 aaKnown RBP2.02□□□□□ -2.09
NIP100YPL174C RPS21AP0C0V8 87 aaKnown RBP2.02□□□□□ -2.09
NIP100YPL174C SEC6P32844 805 aa2.02□□□□□ -2.09
NIP100YPL174C APD1P38281 316 aa2.02□□□□□ -2.09
NIP100YPL174C UBS1P38290 277 aa2.02□□□□□ -2.09
NIP100YPL174C OPT1P40897 799 aa2.02□□□□□ -2.09
NIP100YPL174C PSA1P41940 361 aaKnown RBP2.02□□□□□ -2.09
NIP100YPL174C WAR1Q03631 944 aa2.02□□□□□ -2.09
NIP100YPL174C HLR1Q04429 423 aa2.02□□□□□ -2.09
NIP100YPL174C NGL1Q08213 363 aaKnown RBP2.02□□□□□ -2.09
NIP100YPL174C AHA1Q12449 350 aaKnown RBP2.02□□□□□ -2.09
NIP100YPL174C SEC3P33332 1336 aaKnown RBP2.02□□□□□ -2.09
NIP100YPL174C YMR084WA2P2R3 262 aa2.02□□□□□ -2.09
NIP100YPL174C RPL7AP05737 244 aaKnown RBP2.02□□□□□ -2.09
NIP100YPL174C STE4P18851 423 aa2.02□□□□□ -2.09
NIP100YPL174C HXT4P32467 576 aa2.02□□□□□ -2.09
NIP100YPL174C CCL1P37366 393 aa2.02□□□□□ -2.09
NIP100YPL174C FAT1P38225 669 aa2.02□□□□□ -2.09
NIP100YPL174C YEN1P40028 759 aa2.02□□□□□ -2.09
NIP100YPL174C ULP2P40537 1034 aaPredicted RBP2.02□□□□□ -2.09
NIP100YPL174C HFI1Q12060 488 aa2.02□□□□□ -2.09
NIP100YPL174C RPL7BQ12213 244 aaKnown RBP2.02□□□□□ -2.09
NIP100YPL174C YPK1P12688 680 aaKnown RBP2.01□□□□□ -2.09
NIP100YPL174C IME1P21190 360 aa2.01□□□□□ -2.09
NIP100YPL174C CNE1P27825 502 aa2.01□□□□□ -2.09
NIP100YPL174C DSS4P32601 143 aa2.01□□□□□ -2.09
NIP100YPL174C SNF12P53628 566 aa2.01□□□□□ -2.09
NIP100YPL174C SKY1Q03656 742 aa2.01□□□□□ -2.09
NIP100YPL174C RGT2Q12300 763 aa2.01□□□□□ -2.09
NIP100YPL174C CTT1P06115 562 aa2.01□□□□□ -2.09
NIP100YPL174C RNR3P21672 869 aaKnown RBP2.01□□□□□ -2.09
NIP100YPL174C CAP1P28495 268 aaKnown RBP2.01□□□□□ -2.09
NIP100YPL174C BEM3P32873 1128 aa2.01□□□□□ -2.09
NIP100YPL174C HXT6P39003 570 aaKnown RBP2.01□□□□□ -2.09
NIP100YPL174C HXT7P39004 570 aa2.01□□□□□ -2.09
NIP100YPL174C SNO3P43544 222 aa2.01□□□□□ -2.09
NIP100YPL174C IES1P43579 692 aa2.01□□□□□ -2.09
NIP100YPL174C YGL117WP53133 265 aa2.01□□□□□ -2.09
NIP100YPL174C YEL076C-AP0CX16 216 aa2□□□□□ -2.09
NIP100YPL174C YLR464WP0CX17 216 aa2□□□□□ -2.09
NIP100YPL174C DAL3P32459 195 aa2□□□□□ -2.09
NIP100YPL174C MSS1P32559 526 aaPredicted RBP2□□□□□ -2.09
NIP100YPL174C YEL076CP39971 216 aa2□□□□□ -2.09
NIP100YPL174C GPP1P41277 250 aaKnown RBP2□□□□□ -2.09
NIP100YPL174C IDS2P46958 469 aa2□□□□□ -2.09
NIP100YPL174C SLD3P53135 668 aa2□□□□□ -2.09
NIP100YPL174C CRT10Q08226 957 aa2□□□□□ -2.09
NIP100YPL174C SCO2P38072 301 aa2□□□□□ -2.09
NIP100YPL174C ARG7Q04728 441 aa2□□□□□ -2.09
NIP100YPL174C AQY1P0CD91 305 aa1.99□□□□□ -2.09
NIP100YPL174C JHD1P40034 492 aa1.99□□□□□ -2.09
NIP100YPL174C YGL081WP53156 320 aa1.99□□□□□ -2.09
NIP100YPL174C TPO3Q06451 622 aa1.99□□□□□ -2.09
NIP100YPL174C CWC2Q12046 339 aaPredicted RBP1.99□□□□□ -2.09
NIP100YPL174C VPS5Q92331 675 aa1.99□□□□□ -2.09
NIP100YPL174C ACO1P19414 778 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
NIP100YPL174C COX11P19516 300 aaKnown RBP1.99□□□□□ -2.09
NIP100YPL174C VPS33P20795 691 aa1.99□□□□□ -2.09
NIP100YPL174C EMP65P40085 556 aa1.99□□□□□ -2.09
NIP100YPL174C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
NIP100YPL174C APM4Q99186 491 aa1.99□□□□□ -2.09
NIP100YPL174C EUG1P32474 517 aa1.98□□□□□ -2.09
NIP100YPL174C SAW1P39735 261 aa1.98□□□□□ -2.09
NIP100YPL174C YFL015CP43578 164 aa1.98□□□□□ -2.09
NIP100YPL174C COG2P53271 262 aa1.98□□□□□ -2.09
NIP100YPL174C MPS1P54199 764 aa1.98□□□□□ -2.09
NIP100YPL174C PRS5Q12265 496 aaKnown RBP1.98□□□□□ -2.09
NIP100YPL174C SIP1P32578 815 aa1.98□□□□□ -2.09
NIP100YPL174C RMA1P36001 430 aaKnown RBP1.98□□□□□ -2.09
NIP100YPL174C LRO1P40345 661 aa1.98□□□□□ -2.09
NIP100YPL174C BNA3P47039 444 aaKnown RBP1.98□□□□□ -2.09
NIP100YPL174C ILV2P07342 687 aaKnown RBP1.97□□□□□ -2.09
NIP100YPL174C PMA2P19657 947 aa1.97□□□□□ -2.09
NIP100YPL174C HOP1P20050 605 aa1.97□□□□□ -2.09
NIP100YPL174C YPT7P32939 208 aa1.97□□□□□ -2.09
NIP100YPL174C SER1P33330 395 aaKnown RBP1.97□□□□□ -2.09
NIP100YPL174C SRP68P38687 599 aaKnown RBP1.97□□□□□ -2.09
NIP100YPL174C DUG1P43616 481 aaKnown RBP1.97□□□□□ -2.09
NIP100YPL174C SAP4P53036 818 aa1.97□□□□□ -2.09
NIP100YPL174C TMA17Q12513 150 aa1.97□□□□□ -2.09
NIP100YPL174C ILS1P09436 1072 aaKnown RBP1.97□□□□□ -2.09
NIP100YPL174C RRP8P38961 392 aaKnown RBP1.97□□□□□ -2.09
NIP100YPL174C LAS21P40367 830 aa1.97□□□□□ -2.09
NIP100YPL174C SCS3P53012 380 aa1.97□□□□□ -2.09
NIP100YPL174C GPG1P53130 126 aa1.97□□□□□ -2.09
NIP100YPL174C MTD1Q02046 320 aaKnown RBP1.97□□□□□ -2.09
NIP100YPL174C BSP1Q06604 576 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms