RNA–Protein interactions for RNA: YOR140W

SFL1, Transcript of Transcriptional repressor and activator, yeastyeast

Gene SFL1, Length 2,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFL1YOR140W VPS62P53285 467 aa8.89□□□□□ -0.99
SFL1YOR140W CDC55Q00362 526 aa8.89□□□□□ -0.99
SFL1YOR140W BET4Q00618 327 aa8.89□□□□□ -0.99
SFL1YOR140W KAP95Q06142 861 aaKnown RBP8.89□□□□□ -0.99
SFL1YOR140W SDH5Q08230 162 aa8.89□□□□□ -0.99
SFL1YOR140W YOL087CQ99247 1116 aa8.89□□□□□ -0.99
SFL1YOR140W YML002WP0CF17 737 aa8.88□□□□□ -0.99
SFL1YOR140W CDC24P11433 854 aaPredicted RBP8.88□□□□□ -0.99
SFL1YOR140W CCL1P37366 393 aa8.88□□□□□ -0.99
SFL1YOR140W SHE4P51534 789 aa8.88□□□□□ -0.99
SFL1YOR140W DSL1P53847 754 aa8.88□□□□□ -0.99
SFL1YOR140W NMA111P53920 997 aa8.88□□□□□ -0.99
SFL1YOR140W SEY1Q99287 776 aa8.88□□□□□ -0.99
SFL1YOR140W PUT4P15380 627 aa8.88□□□□□ -0.99
SFL1YOR140W HEM15P16622 393 aa8.88□□□□□ -0.99
SFL1YOR140W SPO16P17122 198 aa8.88□□□□□ -0.99
SFL1YOR140W RIM4P38741 713 aa8.88□□□□□ -0.99
SFL1YOR140W MPH1P40562 993 aa8.88□□□□□ -0.99
SFL1YOR140W POL31P46957 487 aa8.88□□□□□ -0.99
SFL1YOR140W PFD1P46988 109 aa8.88□□□□□ -0.99
SFL1YOR140W STP1Q00947 519 aa8.88□□□□□ -0.99
SFL1YOR140W MRS2Q01926 470 aa8.88□□□□□ -0.99
SFL1YOR140W HEH2Q03281 663 aa8.88□□□□□ -0.99
SFL1YOR140W SXM1Q04175 944 aaKnown RBP8.88□□□□□ -0.99
SFL1YOR140W DNL4Q08387 944 aaPredicted RBP8.88□□□□□ -0.99
SFL1YOR140W REC8Q12188 680 aa8.88□□□□□ -0.99
SFL1YOR140W ADH4P10127 382 aa8.87□□□□□ -0.99
SFL1YOR140W ILV6P25605 309 aaKnown RBP8.87□□□□□ -0.99
SFL1YOR140W RAD16P31244 790 aa8.87□□□□□ -0.99
SFL1YOR140W SLD2P34252 453 aa8.87□□□□□ -0.99
SFL1YOR140W TMA108P40462 946 aa8.87□□□□□ -0.99
SFL1YOR140W ALT2P52892 507 aa8.87□□□□□ -0.99
SFL1YOR140W ZIP2P53061 704 aa8.87□□□□□ -0.99
SFL1YOR140W ELA1P53861 379 aaPredicted RBP8.87□□□□□ -0.99
SFL1YOR140W YMR102CQ03177 834 aa8.87□□□□□ -0.99
SFL1YOR140W THI7Q05998 598 aa8.87□□□□□ -0.99
SFL1YOR140W TPK1P06244 397 aa8.87□□□□□ -0.99
SFL1YOR140W SLY1P22213 666 aa8.87□□□□□ -0.99
SFL1YOR140W PAH1P32567 862 aa8.87□□□□□ -0.99
SFL1YOR140W POP4P38336 279 aa8.87□□□□□ -0.99
SFL1YOR140W ARG2P40360 574 aa8.87□□□□□ -0.99
SFL1YOR140W SUM1P46676 1062 aa8.87□□□□□ -0.99
SFL1YOR140W CAD1P24813 409 aaKnown RBP8.86□□□□□ -0.99
SFL1YOR140W POT1P27796 417 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
SFL1YOR140W GAC1P28006 793 aa8.86□□□□□ -0.99
SFL1YOR140W CYS3P31373 394 aaKnown RBP8.86□□□□□ -0.99
SFL1YOR140W HSL7P38274 827 aa8.86□□□□□ -0.99
SFL1YOR140W ALA1P40825 983 aaKnown RBP8.86□□□□□ -0.99
SFL1YOR140W RPL17BP46990 184 aaKnown RBP8.86□□□□□ -0.99
SFL1YOR140W YGR283CP53336 341 aaPredicted RBP8.86□□□□□ -0.99
SFL1YOR140W SPC98P53540 846 aa8.86□□□□□ -0.99
SFL1YOR140W RCR2Q03446 210 aaKnown RBP8.86□□□□□ -0.99
SFL1YOR140W MAF1P41910 395 aa8.86□□□□□ -0.99
SFL1YOR140W YRB1P41920 201 aaKnown RBP8.86□□□□□ -0.99
SFL1YOR140W TAF9Q05027 157 aa8.86□□□□□ -0.99
SFL1YOR140W RCL1Q08096 367 aaPredicted RBP8.86□□□□□ -0.99
SFL1YOR140W CDC3P32457 520 aaKnown RBP8.85□□□□□ -0.99
SFL1YOR140W YME1P32795 747 aa8.85□□□□□ -0.99
SFL1YOR140W RGD2P43556 714 aa8.85□□□□□ -0.99
SFL1YOR140W TIF35Q04067 274 aaKnown RBP8.85□□□□□ -0.99
SFL1YOR140W PRM6Q04705 352 aa8.85□□□□□ -0.99
SFL1YOR140W ACP1P32463 125 aa8.85□□□□□ -0.99
SFL1YOR140W AIM26P32858 118 aa8.85□□□□□ -0.99
SFL1YOR140W RPC37P36121 282 aa8.85□□□□□ -0.99
SFL1YOR140W YBR056WP38081 501 aa8.85□□□□□ -0.99
SFL1YOR140W RPL22BP56628 122 aaKnown RBP8.85□□□□□ -0.99
SFL1YOR140W RKM2Q03942 479 aa8.85□□□□□ -0.99
SFL1YOR140W SAM3Q08986 587 aa8.85□□□□□ -0.99
SFL1YOR140W FAP7Q12055 197 aaPredicted RBP8.85□□□□□ -0.99
SFL1YOR140W PKH2Q12236 1081 aaKnown RBP8.85□□□□□ -0.99
SFL1YOR140W VPS3P23643 1011 aa8.84□□□□□ -0.99
SFL1YOR140W MUM2P38236 366 aa8.84□□□□□ -0.99
SFL1YOR140W PRK1P40494 810 aa8.84□□□□□ -0.99
SFL1YOR140W TRS85P46944 698 aa8.84□□□□□ -0.99
SFL1YOR140W IST1P53843 298 aaPredicted RBP8.84□□□□□ -0.99
SFL1YOR140W NOP13P53883 403 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
SFL1YOR140W MAG2Q06436 670 aaKnown RBP8.84□□□□□ -0.99
SFL1YOR140W DDC1Q08949 612 aa8.84□□□□□ -0.99
SFL1YOR140W CDC20P26309 610 aa8.83□□□□□ -1
SFL1YOR140W SIF2P38262 535 aa8.83□□□□□ -1
SFL1YOR140W ERP2P39704 215 aa8.83□□□□□ -1
SFL1YOR140W COG6P53959 839 aa8.83□□□□□ -1
SFL1YOR140W ADE12P80210 433 aaKnown RBP8.83□□□□□ -1
SFL1YOR140W YMR027WQ04371 470 aa8.83□□□□□ -1
SFL1YOR140W CDC73Q06697 393 aa8.83□□□□□ -1
SFL1YOR140W YPR097WQ06839 1073 aa8.83□□□□□ -1
SFL1YOR140W XDJ1P39102 459 aa8.83□□□□□ -1
SFL1YOR140W THI20Q08224 551 aa8.83□□□□□ -1
SFL1YOR140W THI21Q08975 551 aa8.83□□□□□ -1
SFL1YOR140W PAB1P04147 577 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
SFL1YOR140W ILV2P07342 687 aaKnown RBP8.82□□□□□ -1
SFL1YOR140W YCR051WP25631 222 aa8.82□□□□□ -1
SFL1YOR140W SLA2P33338 968 aa8.82□□□□□ -1
SFL1YOR140W MRPL7P36519 292 aa8.82□□□□□ -1
SFL1YOR140W ESL1P40456 1118 aa8.82□□□□□ -1
SFL1YOR140W SHR3Q02774 210 aa8.82□□□□□ -1
SFL1YOR140W ESC8Q08119 714 aa8.82□□□□□ -1
SFL1YOR140W LDB19Q12502 818 aa8.82□□□□□ -1
SFL1YOR140W GAL80P04387 435 aa8.82□□□□□ -1
SFL1YOR140W SRV2P17555 526 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms