RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS17	YOR132W	RPS17B	P14127	136 aa	Known RBP	4.08	□□□□□ -1.76
VPS17	YOR132W	NTH1	P32356	751 aa		4.08	□□□□□ -1.76
VPS17	YOR132W	OAF3	P36023	863 aa		4.08	□□□□□ -1.76
VPS17	YOR132W	COS111	P38308	924 aa		4.08	□□□□□ -1.76
VPS17	YOR132W	CCT7	P42943	550 aa	Known RBP	4.08	□□□□□ -1.76
VPS17	YOR132W	RFX1	P48743	811 aa		4.08	□□□□□ -1.76
VPS17	YOR132W	RCR2	Q03446	210 aa	Known RBP	4.08	□□□□□ -1.76
VPS17	YOR132W	APM4	Q99186	491 aa		4.08	□□□□□ -1.76
VPS17	YOR132W	MMS1	Q06211	1407 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	IME1	P21190	360 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	UBS1	P38290	277 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	DUN1	P39009	513 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	YIL166C	P40445	542 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	MPS3	P47069	682 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	TAH11	P47112	604 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	YGR151C	P53287	111 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	GIR2	Q03768	265 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS17	YOR132W	COG4	Q06096	861 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	YDL086W	Q07505	273 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	YOR378W	Q08902	515 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	YOR093C	Q12275	1648 aa		4.07	□□□□□ -1.76
VPS17	YOR132W	FUB1	P25659	250 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	SET3	P36124	751 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	CTP1	P38152	299 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	BUD8	P41698	603 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	STP4	Q07351	490 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	LTE1	P07866	1435 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	PRS1	P32895	427 aa	Known RBP	4.06	□□□□□ -1.76
VPS17	YOR132W	GMH1	P36125	273 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	KHA1	P40309	873 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	IES1	P43579	692 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	SPO1	P53541	631 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	YSH1	Q06224	779 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS17	YOR132W	SUT2	Q12286	268 aa		4.06	□□□□□ -1.76
VPS17	YOR132W	PDR11	P40550	1411 aa		4.05	□□□□□ -1.76
VPS17	YOR132W	MET5	P47169	1442 aa		4.05	□□□□□ -1.76
VPS17	YOR132W	RPS21A	P0C0V8	87 aa	Known RBP	4.05	□□□□□ -1.76
VPS17	YOR132W	GLN4	P13188	809 aa	Known RBP	4.05	□□□□□ -1.76
VPS17	YOR132W	KCC4	P25389	1037 aa		4.05	□□□□□ -1.76
VPS17	YOR132W	APL3	P38065	1025 aa		4.05	□□□□□ -1.76
VPS17	YOR132W	FAT1	P38225	669 aa		4.05	□□□□□ -1.76
VPS17	YOR132W	NOC2	P39744	710 aa	Known RBP	4.05	□□□□□ -1.76
VPS17	YOR132W	VPS27	P40343	622 aa	Known RBP	4.05	□□□□□ -1.76
VPS17	YOR132W	TAF4	P50105	388 aa		4.05	□□□□□ -1.76
VPS17	YOR132W	NSE5	Q03718	556 aa		4.05	□□□□□ -1.76
VPS17	YOR132W	BMS1	Q08965	1183 aa	Known RBP	4.05	□□□□□ -1.76
VPS17	YOR132W	SLX4	Q12098	748 aa		4.05	□□□□□ -1.76
VPS17	YOR132W	TMA17	Q12513	150 aa		4.05	□□□□□ -1.76
VPS17	YOR132W	RPN13	O13563	156 aa		4.04	□□□□□ -1.76
VPS17	YOR132W	MSS1	P32559	526 aa	Predicted RBP	4.04	□□□□□ -1.76
VPS17	YOR132W	KSP1	P38691	1029 aa	Known RBP	4.04	□□□□□ -1.76
VPS17	YOR132W	YHR097C	P38809	366 aa	Known RBP	4.04	□□□□□ -1.76
VPS17	YOR132W	DUG1	P43616	481 aa	Known RBP	4.04	□□□□□ -1.76
VPS17	YOR132W	YJR120W	P47157	116 aa		4.04	□□□□□ -1.76
VPS17	YOR132W	ENP2	P48234	707 aa	Known RBP	4.04	□□□□□ -1.76
VPS17	YOR132W	GIS1	Q03833	894 aa		4.04	□□□□□ -1.76
VPS17	YOR132W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.04	□□□□□ -1.76
VPS17	YOR132W	YLR419W	Q06698	1435 aa	Known RBP	4.04	□□□□□ -1.76
VPS17	YOR132W	MHP1	P43638	1398 aa		4.04	□□□□□ -1.76
VPS17	YOR132W	VID28	P40547	921 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	SPC98	P53540	846 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	APM1	Q00776	475 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS17	YOR132W	ATG16	Q03818	150 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	VMS1	Q04311	632 aa	Known RBP	4.03	□□□□□ -1.76
VPS17	YOR132W	CHC1	P22137	1653 aa	Known RBP	4.03	□□□□□ -1.76
VPS17	YOR132W	BNR1	P40450	1375 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	PIF1	P07271	859 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
VPS17	YOR132W	SPO11	P23179	398 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	ILV6	P25605	309 aa	Known RBP	4.03	□□□□□ -1.76
VPS17	YOR132W	PRE4	P30657	266 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	PPZ2	P33329	710 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	RPT2	P40327	437 aa	Known RBP	4.03	□□□□□ -1.76
VPS17	YOR132W	RNR4	P49723	345 aa	Known RBP	4.03	□□□□□ -1.76
VPS17	YOR132W	NMA2	P53204	395 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	YGR021W	P53212	290 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	ENT2	Q05785	613 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	IZH3	Q07959	543 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	RMP1	Q12530	201 aa		4.03	□□□□□ -1.76
VPS17	YOR132W	VMR1	P38735	1592 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	DPB3	P27344	201 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	DGR2	P32330	852 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	MF(ALPHA)2	P32435	120 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	EUG1	P32474	517 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	EMP70	P32802	667 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	YEL020C	P39994	560 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	IES5	P40060	125 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	DIP5	P53388	608 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	FDC1	Q03034	503 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	SND1	Q04007	877 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	UFO1	Q04511	668 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	RKI1	Q12189	258 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	TMA7	Q3E764	64 aa	Known RBP	4.02	□□□□□ -1.77
VPS17	YOR132W	SEC7	P11075	2009 aa	Known RBP	4.02	□□□□□ -1.77
VPS17	YOR132W	RAV1	P47104	1357 aa		4.02	□□□□□ -1.77
VPS17	YOR132W	CDC26	P14724	124 aa		4.01	□□□□□ -1.77
VPS17	YOR132W	RPN12	P32496	274 aa		4.01	□□□□□ -1.77
VPS17	YOR132W	TOA1	P32773	286 aa		4.01	□□□□□ -1.77
VPS17	YOR132W	MFT1	P33441	392 aa	Known RBP	4.01	□□□□□ -1.77
VPS17	YOR132W	GPP2	P40106	250 aa	Known RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms