RNA–Protein interactions for RNA: YNL210W

MER1, Transcript of mRNA-binding protein required for meiosis-specific mRNA splicing, yeast

Gene MER1, Length 813 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MER1	YNL210W	YCG1	Q06680	1035 aa		5.1	□□□□□ -1.59
MER1	YNL210W	RPS21A	P0C0V8	87 aa	Known RBP	5.09	□□□□□ -1.59
MER1	YNL210W	AQY1	P0CD91	305 aa		5.09	□□□□□ -1.59
MER1	YNL210W	CAP1	P28495	268 aa	Known RBP	5.09	□□□□□ -1.59
MER1	YNL210W	LOT5	P34234	306 aa		5.09	□□□□□ -1.59
MER1	YNL210W	DID4	P36108	232 aa		5.09	□□□□□ -1.59
MER1	YNL210W	OAF1	P39720	1047 aa	Predicted RBP	5.09	□□□□□ -1.59
MER1	YNL210W	PMT3	P47190	753 aa		5.09	□□□□□ -1.59
MER1	YNL210W	MPS1	P54199	764 aa		5.09	□□□□□ -1.59
MER1	YNL210W	UME1	Q03010	460 aa		5.09	□□□□□ -1.59
MER1	YNL210W	ARR3	Q06598	404 aa		5.09	□□□□□ -1.59
MER1	YNL210W	TGS1	Q12052	315 aa		5.09	□□□□□ -1.59
MER1	YNL210W	FRE7	Q12333	620 aa		5.09	□□□□□ -1.59
MER1	YNL210W	BEM3	P32873	1128 aa		5.08	□□□□□ -1.6
MER1	YNL210W	EHT1	P38295	451 aa		5.08	□□□□□ -1.6
MER1	YNL210W	LRO1	P40345	661 aa		5.08	□□□□□ -1.6
MER1	YNL210W	YDL183C	P48569	320 aa		5.08	□□□□□ -1.6
MER1	YNL210W	HMG2	P12684	1045 aa		5.07	□□□□□ -1.6
MER1	YNL210W	MRPL9	P31334	269 aa		5.07	□□□□□ -1.6
MER1	YNL210W	APD1	P38281	316 aa		5.07	□□□□□ -1.6
MER1	YNL210W	YJL043W	P47053	257 aa		5.07	□□□□□ -1.6
MER1	YNL210W	GFD1	Q04839	188 aa	Known RBP	5.07	□□□□□ -1.6
MER1	YNL210W	CCL1	P37366	393 aa		5.06	□□□□□ -1.6
MER1	YNL210W	BRN1	P38170	754 aa		5.06	□□□□□ -1.6
MER1	YNL210W	NMD5	P46970	1048 aa		5.06	□□□□□ -1.6
MER1	YNL210W	SAP4	P53036	818 aa		5.06	□□□□□ -1.6
MER1	YNL210W	USA1	Q03714	838 aa		5.06	□□□□□ -1.6
MER1	YNL210W	NUP145	P49687	1317 aa		5.05	□□□□□ -1.6
MER1	YNL210W	TUF1	P02992	437 aa	Known RBP	5.05	□□□□□ -1.6
MER1	YNL210W	RNR3	P21672	869 aa	Known RBP	5.05	□□□□□ -1.6
MER1	YNL210W	ECM32	P32644	1121 aa	Known RBP	5.05	□□□□□ -1.6
MER1	YNL210W	YFL015C	P43578	164 aa		5.05	□□□□□ -1.6
MER1	YNL210W	GPG1	P53130	126 aa		5.05	□□□□□ -1.6
MER1	YNL210W	GEP3	Q08622	556 aa		5.05	□□□□□ -1.6
MER1	YNL210W	SEC3	P33332	1336 aa	Known RBP	5.04	□□□□□ -1.6
MER1	YNL210W	DGR2	P32330	852 aa		5.04	□□□□□ -1.6
MER1	YNL210W	YPT10	P38146	199 aa		5.04	□□□□□ -1.6
MER1	YNL210W	EXO1	P39875	702 aa		5.04	□□□□□ -1.6
MER1	YNL210W	GPP1	P41277	250 aa	Known RBP	5.04	□□□□□ -1.6
MER1	YNL210W	YNR029C	P53729	429 aa	Known RBP	5.04	□□□□□ -1.6
MER1	YNL210W	CIR2	Q08822	631 aa		5.04	□□□□□ -1.6
MER1	YNL210W	VPS33	P20795	691 aa		5.03	□□□□□ -1.6
MER1	YNL210W	GSY2	P27472	705 aa		5.03	□□□□□ -1.6
MER1	YNL210W	YJL193W	P39542	402 aa		5.03	□□□□□ -1.6
MER1	YNL210W	OPT1	P40897	799 aa		5.03	□□□□□ -1.6
MER1	YNL210W	SNO3	P43544	222 aa		5.03	□□□□□ -1.6
MER1	YNL210W	BST1	P43571	1029 aa		5.03	□□□□□ -1.6
MER1	YNL210W	YJR142W	P47173	342 aa		5.03	□□□□□ -1.6
MER1	YNL210W	BPL1	P48445	690 aa	Predicted RBP	5.03	□□□□□ -1.6
MER1	YNL210W	ERG13	P54839	491 aa	Known RBP	5.03	□□□□□ -1.6
MER1	YNL210W	TSR4	P25040	408 aa		5.02	□□□□□ -1.61
MER1	YNL210W	HXT4	P32467	576 aa		5.02	□□□□□ -1.61
MER1	YNL210W	SCS3	P53012	380 aa		5.02	□□□□□ -1.61
MER1	YNL210W	YPL068C	Q02749	293 aa		5.02	□□□□□ -1.61
MER1	YNL210W	RSC9	Q03124	581 aa		5.02	□□□□□ -1.61
MER1	YNL210W	BSP1	Q06604	576 aa		5.02	□□□□□ -1.61
MER1	YNL210W	PRS5	Q12265	496 aa	Known RBP	5.02	□□□□□ -1.61
MER1	YNL210W	YUR1	P26725	428 aa		5.01	□□□□□ -1.61
MER1	YNL210W	RMA1	P36001	430 aa	Known RBP	5.01	□□□□□ -1.61
MER1	YNL210W	TDA10	P42938	290 aa		5.01	□□□□□ -1.61
MER1	YNL210W	WAR1	Q03631	944 aa		5.01	□□□□□ -1.61
MER1	YNL210W	RDL1	Q12305	139 aa	Known RBP	5.01	□□□□□ -1.61
MER1	YNL210W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
MER1	YNL210W	RNR4	P49723	345 aa	Known RBP	5	□□□□□ -1.61
MER1	YNL210W	PEF1	P53238	335 aa		5	□□□□□ -1.61
MER1	YNL210W	SQS1	P53866	767 aa	Known RBP	5	□□□□□ -1.61
MER1	YNL210W	FAP7	Q12055	197 aa	Predicted RBP	5	□□□□□ -1.61
MER1	YNL210W	YGR161W-C	Q3E744	92 aa		5	□□□□□ -1.61
MER1	YNL210W	YGR237C	P50089	785 aa		4.99	□□□□□ -1.61
MER1	YNL210W	SPN1	Q06505	410 aa	Predicted RBP	4.99	□□□□□ -1.61
MER1	YNL210W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
MER1	YNL210W	PCL8	Q08966	492 aa		4.99	□□□□□ -1.61
MER1	YNL210W	YLR111W	Q12528	110 aa		4.99	□□□□□ -1.61
MER1	YNL210W	AAC1	P04710	309 aa		4.98	□□□□□ -1.61
MER1	YNL210W	EUG1	P32474	517 aa		4.98	□□□□□ -1.61
MER1	YNL210W	IDP3	P53982	420 aa	Known RBP	4.98	□□□□□ -1.61
MER1	YNL210W	NGL1	Q08213	363 aa	Known RBP	4.98	□□□□□ -1.61
MER1	YNL210W	ATP12	P22135	325 aa		4.97	□□□□□ -1.61
MER1	YNL210W	AEP2	P22136	580 aa		4.97	□□□□□ -1.61
MER1	YNL210W	URE2	P23202	354 aa	Known RBP	4.97	□□□□□ -1.61
MER1	YNL210W	DSS4	P32601	143 aa		4.97	□□□□□ -1.61
MER1	YNL210W	SER1	P33330	395 aa	Known RBP	4.97	□□□□□ -1.61
MER1	YNL210W	FPR3	P38911	411 aa	Known RBP	4.97	□□□□□ -1.61
MER1	YNL210W	PCK1	P10963	549 aa		4.96	□□□□□ -1.62
MER1	YNL210W	SRP68	P38687	599 aa	Known RBP	4.96	□□□□□ -1.62
MER1	YNL210W	SAE2	P46946	345 aa		4.96	□□□□□ -1.62
MER1	YNL210W	SEC12	P11655	471 aa		4.95	□□□□□ -1.62
MER1	YNL210W	YJU2	P28320	278 aa	Predicted RBP	4.95	□□□□□ -1.62
MER1	YNL210W	MNT3	P40549	630 aa		4.95	□□□□□ -1.62
MER1	YNL210W	IRC8	P47046	822 aa		4.95	□□□□□ -1.62
MER1	YNL210W	SKY1	Q03656	742 aa		4.95	□□□□□ -1.62
MER1	YNL210W	TDA9	Q04545	1251 aa		4.95	□□□□□ -1.62
MER1	YNL210W	YPR027C	Q12079	277 aa		4.95	□□□□□ -1.62
MER1	YNL210W	CRC1	Q12289	327 aa		4.95	□□□□□ -1.62
MER1	YNL210W	YPK1	P12688	680 aa	Known RBP	4.94	□□□□□ -1.62
MER1	YNL210W	BET2	P20133	325 aa		4.94	□□□□□ -1.62
MER1	YNL210W	DAL3	P32459	195 aa		4.94	□□□□□ -1.62
MER1	YNL210W	SPC97	P38863	823 aa		4.94	□□□□□ -1.62
MER1	YNL210W	PCI8	P40512	444 aa		4.94	□□□□□ -1.62
MER1	YNL210W	IRC5	P43610	853 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms