RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W JHD1P40034 492 aa4.34□□□□□ -1.71
UBP8YMR223W YFL015CP43578 164 aa4.34□□□□□ -1.71
UBP8YMR223W ENP2P48234 707 aaKnown RBP4.34□□□□□ -1.71
UBP8YMR223W YRB30P53107 440 aaPredicted RBP4.34□□□□□ -1.71
UBP8YMR223W USA1Q03714 838 aa4.34□□□□□ -1.71
UBP8YMR223W FPR4Q06205 392 aaPredicted RBP4.34□□□□□ -1.71
UBP8YMR223W PRS5Q12265 496 aaKnown RBP4.34□□□□□ -1.71
UBP8YMR223W RDL1Q12305 139 aaKnown RBP4.34□□□□□ -1.71
UBP8YMR223W NOP14Q99207 810 aaKnown RBP4.34□□□□□ -1.71
UBP8YMR223W TUF1P02992 437 aaKnown RBP4.33□□□□□ -1.72
UBP8YMR223W ACO1P19414 778 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
UBP8YMR223W SFP1P32432 683 aa4.33□□□□□ -1.72
UBP8YMR223W ASK1P35734 292 aa4.33□□□□□ -1.72
UBP8YMR223W RRP14P36080 434 aaKnown RBP4.33□□□□□ -1.72
UBP8YMR223W TDA10P42938 290 aa4.33□□□□□ -1.72
UBP8YMR223W YJR096WP47137 282 aa4.33□□□□□ -1.72
UBP8YMR223W SAP4P53036 818 aa4.33□□□□□ -1.72
UBP8YMR223W SCW4P53334 386 aaKnown RBP4.33□□□□□ -1.72
UBP8YMR223W SPN1Q06505 410 aaPredicted RBP4.33□□□□□ -1.72
UBP8YMR223W ARR3Q06598 404 aa4.33□□□□□ -1.72
UBP8YMR223W RNR3P21672 869 aaKnown RBP4.32□□□□□ -1.72
UBP8YMR223W URE2P23202 354 aaKnown RBP4.32□□□□□ -1.72
UBP8YMR223W SEC65P29478 273 aa4.32□□□□□ -1.72
UBP8YMR223W LRO1P40345 661 aa4.32□□□□□ -1.72
UBP8YMR223W APM4Q99186 491 aa4.32□□□□□ -1.72
UBP8YMR223W RPL8AP17076 256 aaKnown RBP4.31□□□□□ -1.72
UBP8YMR223W YPT10P38146 199 aa4.31□□□□□ -1.72
UBP8YMR223W YGR153WP48238 217 aa4.31□□□□□ -1.72
UBP8YMR223W YCG1Q06680 1035 aa4.31□□□□□ -1.72
UBP8YMR223W OAF3P36023 863 aa4.3□□□□□ -1.72
UBP8YMR223W PXL1P36166 706 aa4.3□□□□□ -1.72
UBP8YMR223W HXT6P39003 570 aaKnown RBP4.3□□□□□ -1.72
UBP8YMR223W HXT7P39004 570 aa4.3□□□□□ -1.72
UBP8YMR223W HFI1Q12060 488 aa4.3□□□□□ -1.72
UBP8YMR223W CRC1Q12289 327 aa4.3□□□□□ -1.72
UBP8YMR223W YLR111WQ12528 110 aa4.3□□□□□ -1.72
UBP8YMR223W RPS21BQ3E754 87 aaKnown RBP4.3□□□□□ -1.72
UBP8YMR223W MF(ALPHA)2P32435 120 aa4.29□□□□□ -1.72
UBP8YMR223W PRP19P32523 503 aaKnown RBP4.29□□□□□ -1.72
UBP8YMR223W MTC7P32633 139 aa4.29□□□□□ -1.72
UBP8YMR223W GZF3P42944 551 aaKnown RBP4.29□□□□□ -1.72
UBP8YMR223W WAR1Q03631 944 aa4.29□□□□□ -1.72
UBP8YMR223W GLN4P13188 809 aaKnown RBP4.29□□□□□ -1.72
UBP8YMR223W YJL193WP39542 402 aa4.29□□□□□ -1.72
UBP8YMR223W ECM9Q02202 377 aa4.29□□□□□ -1.72
UBP8YMR223W YTA7P40340 1379 aa4.28□□□□□ -1.72
UBP8YMR223W SEC3P33332 1336 aaKnown RBP4.28□□□□□ -1.72
UBP8YMR223W YPR089WO13585 888 aa4.28□□□□□ -1.72
UBP8YMR223W AAC1P04710 309 aa4.28□□□□□ -1.72
UBP8YMR223W VPS33P20795 691 aa4.28□□□□□ -1.72
UBP8YMR223W YHR033WP38690 423 aa4.28□□□□□ -1.72
UBP8YMR223W YDL183CP48569 320 aa4.28□□□□□ -1.72
UBP8YMR223W MRPL1Q04599 285 aa4.28□□□□□ -1.72
UBP8YMR223W ENT2Q05785 613 aa4.28□□□□□ -1.72
UBP8YMR223W DID4P36108 232 aa4.27□□□□□ -1.73
UBP8YMR223W YIL092WP40497 633 aa4.27□□□□□ -1.73
UBP8YMR223W SAE2P46946 345 aa4.27□□□□□ -1.73
UBP8YMR223W PTA1Q01329 785 aaPredicted RBP4.27□□□□□ -1.73
UBP8YMR223W HMG2P12684 1045 aa4.26□□□□□ -1.73
UBP8YMR223W CDC26P14724 124 aa4.26□□□□□ -1.73
UBP8YMR223W YAP1P19880 650 aaKnown RBP4.26□□□□□ -1.73
UBP8YMR223W EHT1P38295 451 aa4.26□□□□□ -1.73
UBP8YMR223W VID28P40547 921 aa4.26□□□□□ -1.73
UBP8YMR223W CFD1P40558 293 aa4.26□□□□□ -1.73
UBP8YMR223W LSC1P53598 329 aaKnown RBP4.26□□□□□ -1.73
UBP8YMR223W YNL058CP53947 316 aa4.26□□□□□ -1.73
UBP8YMR223W NUP53Q03790 475 aa4.26□□□□□ -1.73
UBP8YMR223W YHM2Q04013 314 aa4.26□□□□□ -1.73
UBP8YMR223W UTP14Q04500 899 aaKnown RBP4.26□□□□□ -1.73
UBP8YMR223W NEW1Q08972 1196 aaKnown RBP4.26□□□□□ -1.73
UBP8YMR223W YTM1Q12024 460 aaPredicted RBP4.26□□□□□ -1.73
UBP8YMR223W MGM1P32266 881 aa4.25□□□□□ -1.73
UBP8YMR223W MNN11P46985 422 aaKnown RBP4.25□□□□□ -1.73
UBP8YMR223W ALG12P53730 551 aa4.25□□□□□ -1.73
UBP8YMR223W HRD3Q05787 833 aa4.25□□□□□ -1.73
UBP8YMR223W TPO3Q06451 622 aa4.25□□□□□ -1.73
UBP8YMR223W BI2P03873 423 aa4.24□□□□□ -1.73
UBP8YMR223W YJU2P28320 278 aaPredicted RBP4.24□□□□□ -1.73
UBP8YMR223W SWE1P32944 819 aa4.24□□□□□ -1.73
UBP8YMR223W TYS1P36421 394 aaKnown RBP4.24□□□□□ -1.73
UBP8YMR223W MTQ2Q03920 221 aaPredicted RBP4.24□□□□□ -1.73
UBP8YMR223W CRT10Q08226 957 aa4.24□□□□□ -1.73
UBP8YMR223W PCL8Q08966 492 aa4.24□□□□□ -1.73
UBP8YMR223W DGR2P32330 852 aa4.23□□□□□ -1.73
UBP8YMR223W FAT1P38225 669 aa4.23□□□□□ -1.73
UBP8YMR223W HLJ1P48353 224 aa4.23□□□□□ -1.73
UBP8YMR223W THI73Q07904 523 aa4.23□□□□□ -1.73
UBP8YMR223W YMR085WP0CF18 432 aa4.22□□□□□ -1.73
UBP8YMR223W YER190C-BP0CX94 160 aa4.22□□□□□ -1.73
UBP8YMR223W YEL077W-AP0CX95 160 aa4.22□□□□□ -1.73
UBP8YMR223W YGR296C-BP0CX96 160 aa4.22□□□□□ -1.73
UBP8YMR223W YPL283W-BP0CX97 160 aa4.22□□□□□ -1.73
UBP8YMR223W YPR204C-AP0CX98 160 aa4.22□□□□□ -1.73
UBP8YMR223W YMR124WP39523 943 aaKnown RBP4.22□□□□□ -1.73
UBP8YMR223W YIL024CP40543 189 aa4.22□□□□□ -1.73
UBP8YMR223W IRC7P43623 340 aa4.22□□□□□ -1.73
UBP8YMR223W AHA1Q12449 350 aaKnown RBP4.22□□□□□ -1.73
UBP8YMR223W OAF1P39720 1047 aaPredicted RBP4.21□□□□□ -1.73
UBP8YMR223W PEF1P53238 335 aa4.21□□□□□ -1.73
UBP8YMR223W COP1P53622 1201 aaKnown RBP4.21□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms