RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A ECM2P38241 364 aaKnown RBP13.18□□□□□ -0.3
LSM3YLR438C-A MSG5P38590 489 aa13.18□□□□□ -0.3
LSM3YLR438C-A MMS21P38632 267 aa13.18□□□□□ -0.3
LSM3YLR438C-A MOB1P40484 314 aa13.18□□□□□ -0.3
LSM3YLR438C-A MNN11P46985 422 aaKnown RBP13.18□□□□□ -0.3
LSM3YLR438C-A NUR1Q12066 484 aa13.18□□□□□ -0.3
LSM3YLR438C-A IZH4Q99393 312 aa13.18□□□□□ -0.3
LSM3YLR438C-A MTF1P14908 341 aaKnown RBP13.17□□□□□ -0.3
LSM3YLR438C-A PSE1P32337 1089 aaKnown RBP13.17□□□□□ -0.3
LSM3YLR438C-A SFB3P38810 929 aa13.17□□□□□ -0.3
LSM3YLR438C-A SEY1Q99287 776 aa13.17□□□□□ -0.3
LSM3YLR438C-A GCD6P32501 712 aaKnown RBP13.16□□□□□ -0.3
LSM3YLR438C-A NFU1P32860 256 aa13.16□□□□□ -0.3
LSM3YLR438C-A PBP2P38151 413 aaKnown RBP RIP-Chip data13.16□□□□□ -0.3not detected
LSM3YLR438C-A VHC1P38329 1120 aa13.16□□□□□ -0.3
LSM3YLR438C-A POP4P38336 279 aa13.16□□□□□ -0.3
LSM3YLR438C-A SAF1P38352 637 aa13.16□□□□□ -0.3
LSM3YLR438C-A LAM1P38851 1228 aa13.16□□□□□ -0.3
LSM3YLR438C-A SAW1P39735 261 aa13.16□□□□□ -0.3
LSM3YLR438C-A RFX1P48743 811 aa13.16□□□□□ -0.3
LSM3YLR438C-A NSE5Q03718 556 aa13.16□□□□□ -0.3
LSM3YLR438C-A FAP7Q12055 197 aaPredicted RBP13.16□□□□□ -0.3
LSM3YLR438C-A RMP1Q12530 201 aa13.16□□□□□ -0.3
LSM3YLR438C-A RAD10P06838 210 aa13.15□□□□□ -0.3
LSM3YLR438C-A SPO16P17122 198 aa13.15□□□□□ -0.3
LSM3YLR438C-A DIA4P38705 446 aaPredicted RBP13.15□□□□□ -0.3
LSM3YLR438C-A FSH1P38777 243 aaKnown RBP13.15□□□□□ -0.3
LSM3YLR438C-A MKT1P40850 830 aaKnown RBP13.15□□□□□ -0.3
LSM3YLR438C-A UFE1P41834 346 aa13.15□□□□□ -0.3
LSM3YLR438C-A CNN1P43618 361 aa13.15□□□□□ -0.3
LSM3YLR438C-A RTT101P47050 842 aa13.15□□□□□ -0.3
LSM3YLR438C-A YJR079WP47126 109 aa13.15□□□□□ -0.3
LSM3YLR438C-A YNL144CP53907 740 aa13.15□□□□□ -0.3
LSM3YLR438C-A NOP6Q07623 225 aaKnown RBP13.15□□□□□ -0.3
LSM3YLR438C-A YPQ1Q12010 308 aa13.15□□□□□ -0.3
LSM3YLR438C-A LPX1Q12405 387 aaKnown RBP13.15□□□□□ -0.3
LSM3YLR438C-A NOP58Q12499 511 aaKnown RBP13.15□□□□□ -0.3
LSM3YLR438C-A HIS1P00498 297 aaKnown RBP13.14□□□□□ -0.31
LSM3YLR438C-A APE1P14904 514 aa13.14□□□□□ -0.31
LSM3YLR438C-A MET16P18408 261 aaPredicted RBP13.14□□□□□ -0.31
LSM3YLR438C-A YCR015CP25616 317 aa13.14□□□□□ -0.31
LSM3YLR438C-A HXT3P32466 567 aaKnown RBP13.14□□□□□ -0.31
LSM3YLR438C-A ECM13P38195 257 aa13.14□□□□□ -0.31
LSM3YLR438C-A BIT2P38346 545 aa13.14□□□□□ -0.31
LSM3YLR438C-A STL1P39932 569 aa13.14□□□□□ -0.31
LSM3YLR438C-A ATG36P46983 293 aa13.14□□□□□ -0.31
LSM3YLR438C-A RPL22BP56628 122 aaKnown RBP13.14□□□□□ -0.31
LSM3YLR438C-A EFG1Q3E705 233 aaKnown RBP13.14□□□□□ -0.31
LSM3YLR438C-A PUF4P25339 888 aaKnown RBP RIP-Chip data13.13□□□□□ -0.31not detected
LSM3YLR438C-A LAS1P36146 502 aaPredicted RBP13.13□□□□□ -0.31
LSM3YLR438C-A ATG12P38316 186 aa13.13□□□□□ -0.31
LSM3YLR438C-A URA8P38627 578 aaPredicted RBP13.13□□□□□ -0.31
LSM3YLR438C-A AIM18P38884 321 aa13.13□□□□□ -0.31
LSM3YLR438C-A RRT5P43607 289 aa13.13□□□□□ -0.31
LSM3YLR438C-A ALY2P47029 1046 aa13.13□□□□□ -0.31
LSM3YLR438C-A YJL045WP47052 634 aa13.13□□□□□ -0.31
LSM3YLR438C-A YGR127WP53275 312 aa13.13□□□□□ -0.31
LSM3YLR438C-A VPS9P54787 451 aa13.13□□□□□ -0.31
LSM3YLR438C-A DOS2P54858 310 aa13.13□□□□□ -0.31
LSM3YLR438C-A ARA2Q04212 335 aa13.13□□□□□ -0.31
LSM3YLR438C-A YLL056CQ12177 298 aa13.13□□□□□ -0.31
LSM3YLR438C-A ENO2P00925 437 aaKnown RBP13.12□□□□□ -0.31
LSM3YLR438C-A ADY2P25613 283 aa13.12□□□□□ -0.31
LSM3YLR438C-A RPC37P36121 282 aa13.12□□□□□ -0.31
LSM3YLR438C-A KTR4P38131 464 aa13.12□□□□□ -0.31
LSM3YLR438C-A SPP381P38282 291 aaPredicted RBP13.12□□□□□ -0.31
LSM3YLR438C-A YIL161WP40449 235 aaKnown RBP13.12□□□□□ -0.31
LSM3YLR438C-A INA22P40576 216 aa13.12□□□□□ -0.31
LSM3YLR438C-A EMW1P42842 904 aaKnown RBP13.12□□□□□ -0.31
LSM3YLR438C-A NMD5P46970 1048 aa13.12□□□□□ -0.31
LSM3YLR438C-A YJL132WP47014 750 aa13.12□□□□□ -0.31
LSM3YLR438C-A BSP1Q06604 576 aa13.12□□□□□ -0.31
LSM3YLR438C-A PRP9P19736 530 aaKnown RBP13.11□□□□□ -0.31
LSM3YLR438C-A SEC6P32844 805 aa13.11□□□□□ -0.31
LSM3YLR438C-A CKB2P38930 258 aa13.11□□□□□ -0.31
LSM3YLR438C-A EDC3P39998 551 aaKnown RBP13.11□□□□□ -0.31
LSM3YLR438C-A LSB6P42951 607 aa13.11□□□□□ -0.31
LSM3YLR438C-A BST1P43571 1029 aa13.11□□□□□ -0.31
LSM3YLR438C-A TCB2P48231 1178 aa13.11□□□□□ -0.31
LSM3YLR438C-A LEE1Q02799 301 aaKnown RBP13.11□□□□□ -0.31
LSM3YLR438C-A GRX8Q05926 109 aa13.11□□□□□ -0.31
LSM3YLR438C-A AAD15Q08361 143 aa13.11□□□□□ -0.31
LSM3YLR438C-A PUF2Q12221 1075 aaKnown RBP RIP-Chip data13.11□□□□□ -0.31not detected
LSM3YLR438C-A LCB4Q12246 624 aa13.11□□□□□ -0.31
LSM3YLR438C-A GPM3Q12326 303 aa13.11□□□□□ -0.31
LSM3YLR438C-A RRD2Q12461 358 aa13.11□□□□□ -0.31
LSM3YLR438C-A RAD5P32849 1169 aaPredicted RBP13.1□□□□□ -0.31
LSM3YLR438C-A YEL028WP39989 153 aa13.1□□□□□ -0.31
LSM3YLR438C-A YNL320WP42840 284 aa13.1□□□□□ -0.31
LSM3YLR438C-A PCL10P53124 433 aa13.1□□□□□ -0.31
LSM3YLR438C-A COQ6P53318 479 aa13.1□□□□□ -0.31
LSM3YLR438C-A PIR3Q03180 325 aa13.1□□□□□ -0.31
LSM3YLR438C-A ACM1Q08981 209 aa13.1□□□□□ -0.31
LSM3YLR438C-A CDC24P11433 854 aaPredicted RBP13.09□□□□□ -0.31
LSM3YLR438C-A PPH22P23595 377 aa13.09□□□□□ -0.31
LSM3YLR438C-A SGE1P33335 543 aa13.09□□□□□ -0.31
LSM3YLR438C-A DUG2P38149 878 aa13.09□□□□□ -0.31
LSM3YLR438C-A OTU2P38747 307 aaKnown RBP13.09□□□□□ -0.31
LSM3YLR438C-A VAC8P39968 578 aa13.09□□□□□ -0.31
LSM3YLR438C-A MRX6P48564 524 aa13.09□□□□□ -0.31
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms