RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C USA1Q03714 838 aa4.05□□□□□ -1.76
NYV1YLR093C SPN1Q06505 410 aaPredicted RBP4.05□□□□□ -1.76
NYV1YLR093C RDL1Q12305 139 aaKnown RBP4.05□□□□□ -1.76
NYV1YLR093C CCL1P37366 393 aa4.04□□□□□ -1.76
NYV1YLR093C JHD1P40034 492 aa4.04□□□□□ -1.76
NYV1YLR093C AIM41Q12032 185 aa4.04□□□□□ -1.76
NYV1YLR093C YLR111WQ12528 110 aa4.04□□□□□ -1.76
NYV1YLR093C SEC3P33332 1336 aaKnown RBP4.03□□□□□ -1.76
NYV1YLR093C ACO1P19414 778 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
NYV1YLR093C RNR3P21672 869 aaKnown RBP4.03□□□□□ -1.76
NYV1YLR093C MTC7P32633 139 aa4.03□□□□□ -1.76
NYV1YLR093C PXL1P36166 706 aa4.03□□□□□ -1.76
NYV1YLR093C YPT10P38146 199 aa4.03□□□□□ -1.76
NYV1YLR093C LRO1P40345 661 aa4.03□□□□□ -1.76
NYV1YLR093C YJR096WP47137 282 aa4.03□□□□□ -1.76
NYV1YLR093C SDA1P53313 767 aaKnown RBP4.03□□□□□ -1.76
NYV1YLR093C ARR3Q06598 404 aa4.03□□□□□ -1.76
NYV1YLR093C CRC1Q12289 327 aa4.03□□□□□ -1.76
NYV1YLR093C APM4Q99186 491 aa4.03□□□□□ -1.76
NYV1YLR093C URE2P23202 354 aaKnown RBP4.02□□□□□ -1.77
NYV1YLR093C SEC65P29478 273 aa4.02□□□□□ -1.77
NYV1YLR093C HXT6P39003 570 aaKnown RBP4.02□□□□□ -1.77
NYV1YLR093C HXT7P39004 570 aa4.02□□□□□ -1.77
NYV1YLR093C RPS21BQ3E754 87 aaKnown RBP4.02□□□□□ -1.77
NYV1YLR093C MF(ALPHA)2P32435 120 aa4.01□□□□□ -1.77
NYV1YLR093C OAF3P36023 863 aa4.01□□□□□ -1.77
NYV1YLR093C ENP2P48234 707 aaKnown RBP4.01□□□□□ -1.77
NYV1YLR093C YGR153WP48238 217 aa4.01□□□□□ -1.77
NYV1YLR093C YDL183CP48569 320 aa4.01□□□□□ -1.77
NYV1YLR093C YCG1Q06680 1035 aa4.01□□□□□ -1.77
NYV1YLR093C HFI1Q12060 488 aa4.01□□□□□ -1.77
NYV1YLR093C NOP14Q99207 810 aaKnown RBP4.01□□□□□ -1.77
NYV1YLR093C TUF1P02992 437 aaKnown RBP4□□□□□ -1.77
NYV1YLR093C RPL8AP17076 256 aaKnown RBP4□□□□□ -1.77
NYV1YLR093C RRP14P36080 434 aaKnown RBP4□□□□□ -1.77
NYV1YLR093C WAR1Q03631 944 aa4□□□□□ -1.77
NYV1YLR093C FPR4Q06205 392 aaPredicted RBP4□□□□□ -1.77
NYV1YLR093C YPR089WO13585 888 aa3.99□□□□□ -1.77
NYV1YLR093C HMG2P12684 1045 aa3.99□□□□□ -1.77
NYV1YLR093C YAP1P19880 650 aaKnown RBP3.99□□□□□ -1.77
NYV1YLR093C EHT1P38295 451 aa3.99□□□□□ -1.77
NYV1YLR093C SAE2P46946 345 aa3.99□□□□□ -1.77
NYV1YLR093C ECM9Q02202 377 aa3.99□□□□□ -1.77
NYV1YLR093C NUP53Q03790 475 aa3.99□□□□□ -1.77
NYV1YLR093C PCL8Q08966 492 aa3.99□□□□□ -1.77
NYV1YLR093C AAC1P04710 309 aa3.98□□□□□ -1.77
NYV1YLR093C GLN4P13188 809 aaKnown RBP3.98□□□□□ -1.77
NYV1YLR093C CDC26P14724 124 aa3.98□□□□□ -1.77
NYV1YLR093C YJU2P28320 278 aaPredicted RBP3.98□□□□□ -1.77
NYV1YLR093C SFP1P32432 683 aa3.98□□□□□ -1.77
NYV1YLR093C PRP19P32523 503 aaKnown RBP3.98□□□□□ -1.77
NYV1YLR093C GZF3P42944 551 aaKnown RBP3.98□□□□□ -1.77
NYV1YLR093C LSC1P53598 329 aaKnown RBP3.98□□□□□ -1.77
NYV1YLR093C VPS33P20795 691 aa3.97□□□□□ -1.77
NYV1YLR093C YHR033WP38690 423 aa3.97□□□□□ -1.77
NYV1YLR093C YJL193WP39542 402 aa3.97□□□□□ -1.77
NYV1YLR093C VID28P40547 921 aa3.97□□□□□ -1.77
NYV1YLR093C CFD1P40558 293 aa3.97□□□□□ -1.77
NYV1YLR093C MRPL1Q04599 285 aa3.97□□□□□ -1.77
NYV1YLR093C HRD3Q05787 833 aa3.97□□□□□ -1.77
NYV1YLR093C NEW1Q08972 1196 aaKnown RBP3.97□□□□□ -1.77
NYV1YLR093C YTA7P40340 1379 aa3.97□□□□□ -1.77
NYV1YLR093C YER190C-BP0CX94 160 aa3.96□□□□□ -1.78
NYV1YLR093C YEL077W-AP0CX95 160 aa3.96□□□□□ -1.78
NYV1YLR093C YGR296C-BP0CX96 160 aa3.96□□□□□ -1.78
NYV1YLR093C YPL283W-BP0CX97 160 aa3.96□□□□□ -1.78
NYV1YLR093C YPR204C-AP0CX98 160 aa3.96□□□□□ -1.78
NYV1YLR093C FAT1P38225 669 aa3.96□□□□□ -1.78
NYV1YLR093C YIL092WP40497 633 aa3.96□□□□□ -1.78
NYV1YLR093C PTA1Q01329 785 aaPredicted RBP3.96□□□□□ -1.78
NYV1YLR093C TPO3Q06451 622 aa3.96□□□□□ -1.78
NYV1YLR093C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
NYV1YLR093C YMR085WP0CF18 432 aa3.95□□□□□ -1.78
NYV1YLR093C MGM1P32266 881 aa3.95□□□□□ -1.78
NYV1YLR093C YMR124WP39523 943 aaKnown RBP3.95□□□□□ -1.78
NYV1YLR093C YIL024CP40543 189 aa3.95□□□□□ -1.78
NYV1YLR093C ALG12P53730 551 aa3.95□□□□□ -1.78
NYV1YLR093C YHM2Q04013 314 aa3.95□□□□□ -1.78
NYV1YLR093C ENT2Q05785 613 aa3.95□□□□□ -1.78
NYV1YLR093C DID4P36108 232 aa3.94□□□□□ -1.78
NYV1YLR093C COP1P53622 1201 aaKnown RBP3.94□□□□□ -1.78
NYV1YLR093C MTQ2Q03920 221 aaPredicted RBP3.94□□□□□ -1.78
NYV1YLR093C CRT10Q08226 957 aa3.94□□□□□ -1.78
NYV1YLR093C HER1Q12276 1246 aa3.94□□□□□ -1.78
NYV1YLR093C YPT1P01123 206 aaKnown RBP3.93□□□□□ -1.78
NYV1YLR093C BI2P03873 423 aa3.93□□□□□ -1.78
NYV1YLR093C OAF1P39720 1047 aaPredicted RBP3.93□□□□□ -1.78
NYV1YLR093C IRC7P43623 340 aa3.93□□□□□ -1.78
NYV1YLR093C MNN11P46985 422 aaKnown RBP3.93□□□□□ -1.78
NYV1YLR093C YPL071CQ02864 156 aa3.93□□□□□ -1.78
NYV1YLR093C YTM1Q12024 460 aaPredicted RBP3.93□□□□□ -1.78
NYV1YLR093C AHA1Q12449 350 aaKnown RBP3.93□□□□□ -1.78
NYV1YLR093C CET1O13297 549 aaPredicted RBP3.92□□□□□ -1.78
NYV1YLR093C RPS21AP0C0V8 87 aaKnown RBP3.92□□□□□ -1.78
NYV1YLR093C YCP4P25349 247 aaKnown RBP3.92□□□□□ -1.78
NYV1YLR093C TYS1P36421 394 aaKnown RBP3.92□□□□□ -1.78
NYV1YLR093C PEF1P53238 335 aa3.92□□□□□ -1.78
NYV1YLR093C CYK3Q07533 885 aa3.92□□□□□ -1.78
NYV1YLR093C THI73Q07904 523 aa3.92□□□□□ -1.78
NYV1YLR093C AIM44Q99299 758 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms