RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeast

Gene VPS25, Length 609 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS25	YJR102C	SDS22	P36047	338 aa		4.6	□□□□□ -1.67
VPS25	YJR102C	YJL193W	P39542	402 aa		4.6	□□□□□ -1.67
VPS25	YJR102C	SSP120	P39931	234 aa	Known RBP	4.6	□□□□□ -1.67
VPS25	YJR102C	SCS2	P40075	244 aa	Known RBP	4.6	□□□□□ -1.67
VPS25	YJR102C	SNF12	P53628	566 aa		4.6	□□□□□ -1.67
VPS25	YJR102C	CNM67	P53865	581 aa	Known RBP	4.6	□□□□□ -1.67
VPS25	YJR102C	EFR3	Q03653	782 aa	Known RBP	4.6	□□□□□ -1.67
VPS25	YJR102C	YPL216W	Q08964	1102 aa		4.6	□□□□□ -1.67
VPS25	YJR102C	STE12	P13574	688 aa		4.59	□□□□□ -1.67
VPS25	YJR102C	CBP3	P21560	335 aa		4.59	□□□□□ -1.67
VPS25	YJR102C	TGL1	P34163	548 aa		4.59	□□□□□ -1.67
VPS25	YJR102C	YKL133C	P36066	463 aa		4.59	□□□□□ -1.67
VPS25	YJR102C	LRO1	P40345	661 aa		4.59	□□□□□ -1.67
VPS25	YJR102C	YIP4	P53093	235 aa		4.59	□□□□□ -1.67
VPS25	YJR102C	YNR071C	P53757	342 aa		4.59	□□□□□ -1.67
VPS25	YJR102C	MET14	Q02196	202 aa		4.59	□□□□□ -1.67
VPS25	YJR102C	YDR179W-A	Q03983	463 aa		4.59	□□□□□ -1.67
VPS25	YJR102C	VAS1	P07806	1104 aa	Known RBP	4.58	□□□□□ -1.68
VPS25	YJR102C	VPS33	P20795	691 aa		4.58	□□□□□ -1.68
VPS25	YJR102C	SPO11	P23179	398 aa		4.58	□□□□□ -1.68
VPS25	YJR102C	TAF5	P38129	798 aa		4.58	□□□□□ -1.68
VPS25	YJR102C	MAD2	P40958	196 aa		4.58	□□□□□ -1.68
VPS25	YJR102C	QRI1	P43123	477 aa	Known RBP	4.58	□□□□□ -1.68
VPS25	YJR102C	HOF1	Q05080	669 aa		4.58	□□□□□ -1.68
VPS25	YJR102C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
VPS25	YJR102C	DBP10	Q12389	995 aa	Known RBP	4.58	□□□□□ -1.68
VPS25	YJR102C	HOP1	P20050	605 aa		4.57	□□□□□ -1.68
VPS25	YJR102C	CAP1	P28495	268 aa	Known RBP	4.57	□□□□□ -1.68
VPS25	YJR102C	DSS4	P32601	143 aa		4.57	□□□□□ -1.68
VPS25	YJR102C	EMP70	P32802	667 aa		4.57	□□□□□ -1.68
VPS25	YJR102C	YMC2	P38087	329 aa		4.57	□□□□□ -1.68
VPS25	YJR102C	STB5	P38699	743 aa		4.57	□□□□□ -1.68
VPS25	YJR102C	MUP3	P38734	546 aa		4.57	□□□□□ -1.68
VPS25	YJR102C	RIM4	P38741	713 aa		4.57	□□□□□ -1.68
VPS25	YJR102C	ARR3	Q06598	404 aa		4.57	□□□□□ -1.68
VPS25	YJR102C	YOL114C	Q12322	202 aa		4.57	□□□□□ -1.68
VPS25	YJR102C	PHO5	P00635	467 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	GAL1	P04385	528 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	ATP4	P05626	244 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	ADH4	P10127	382 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	STE4	P18851	423 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	BET2	P20133	325 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	RPA135	P22138	1203 aa	Known RBP	4.56	□□□□□ -1.68
VPS25	YJR102C	PPZ2	P33329	710 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	PIH1	P38768	344 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	MIT1	P40002	666 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	YIL166C	P40445	542 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	BUD17	P53727	317 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	CEG1	Q01159	459 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS25	YJR102C	DIN7	Q12086	430 aa		4.56	□□□□□ -1.68
VPS25	YJR102C	TPK2	P06245	380 aa		4.55	□□□□□ -1.68
VPS25	YJR102C	PTP2	P29461	750 aa		4.55	□□□□□ -1.68
VPS25	YJR102C	PMC1	P38929	1173 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS25	YJR102C	HIS6	P40545	261 aa		4.55	□□□□□ -1.68
VPS25	YJR102C	ASN1	P49089	572 aa	Known RBP	4.55	□□□□□ -1.68
VPS25	YJR102C	PIP2	P52960	996 aa		4.55	□□□□□ -1.68
VPS25	YJR102C	APM1	Q00776	475 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS25	YJR102C	MLC2	Q06580	163 aa		4.55	□□□□□ -1.68
VPS25	YJR102C	YDL073W	Q07454	984 aa		4.55	□□□□□ -1.68
VPS25	YJR102C	SUT2	Q12286	268 aa		4.55	□□□□□ -1.68
VPS25	YJR102C	ARP7	Q12406	477 aa		4.55	□□□□□ -1.68
VPS25	YJR102C	RPN13	O13563	156 aa		4.54	□□□□□ -1.68
VPS25	YJR102C	LOT5	P34234	306 aa		4.54	□□□□□ -1.68
VPS25	YJR102C	SWD1	P39706	426 aa		4.54	□□□□□ -1.68
VPS25	YJR102C	YEL020C	P39994	560 aa		4.54	□□□□□ -1.68
VPS25	YJR102C	IMA5	P40884	581 aa		4.54	□□□□□ -1.68
VPS25	YJR102C	GSM1	P42950	618 aa		4.54	□□□□□ -1.68
VPS25	YJR102C	HIM1	Q06674	414 aa		4.54	□□□□□ -1.68
VPS25	YJR102C	TGS1	Q12052	315 aa		4.54	□□□□□ -1.68
VPS25	YJR102C	CTT1	P06115	562 aa		4.53	□□□□□ -1.68
VPS25	YJR102C	CNE1	P27825	502 aa		4.53	□□□□□ -1.68
VPS25	YJR102C	VFA1	P40080	203 aa		4.53	□□□□□ -1.68
VPS25	YJR102C	NOP2	P40991	618 aa	Known RBP	4.53	□□□□□ -1.68
VPS25	YJR102C	TEP1	P53916	434 aa		4.53	□□□□□ -1.68
VPS25	YJR102C	ACS1	Q01574	713 aa		4.53	□□□□□ -1.68
VPS25	YJR102C	TRI1	Q05024	226 aa		4.53	□□□□□ -1.68
VPS25	YJR102C	ZPS1	Q12512	249 aa		4.53	□□□□□ -1.68
VPS25	YJR102C	ADY2	P25613	283 aa		4.52	□□□□□ -1.69
VPS25	YJR102C	RPS7A	P26786	190 aa	Known RBP	4.52	□□□□□ -1.69
VPS25	YJR102C	CCL1	P37366	393 aa		4.52	□□□□□ -1.69
VPS25	YJR102C	IDS2	P46958	469 aa		4.52	□□□□□ -1.69
VPS25	YJR102C	MAD3	P47074	515 aa		4.52	□□□□□ -1.69
VPS25	YJR102C	RPS15	Q01855	142 aa	Known RBP	4.52	□□□□□ -1.69
VPS25	YJR102C	SAT4	P25333	603 aa	Known RBP	4.51	□□□□□ -1.69
VPS25	YJR102C	YLF2	P38746	405 aa		4.51	□□□□□ -1.69
VPS25	YJR102C	QRI7	P43122	407 aa		4.51	□□□□□ -1.69
VPS25	YJR102C	PUS4	P48567	403 aa	Known RBP	4.51	□□□□□ -1.69
VPS25	YJR102C	YPK1	P12688	680 aa	Known RBP	4.5	□□□□□ -1.69
VPS25	YJR102C	PEX2	P32800	271 aa		4.5	□□□□□ -1.69
VPS25	YJR102C	UGP1	P32861	499 aa	Known RBP	4.5	□□□□□ -1.69
VPS25	YJR102C	APM3	P38153	483 aa		4.5	□□□□□ -1.69
VPS25	YJR102C	LNP1	P38878	278 aa		4.5	□□□□□ -1.69
VPS25	YJR102C	VPS27	P40343	622 aa	Known RBP	4.5	□□□□□ -1.69
VPS25	YJR102C	TPM2	P40414	161 aa		4.5	□□□□□ -1.69
VPS25	YJR102C	COS12	P53053	380 aa		4.5	□□□□□ -1.69
VPS25	YJR102C	RTS3	P53289	263 aa		4.5	□□□□□ -1.69
VPS25	YJR102C	COQ6	P53318	479 aa		4.5	□□□□□ -1.69
VPS25	YJR102C	MOT3	P54785	490 aa	Known RBP	4.5	□□□□□ -1.69
VPS25	YJR102C	FMP30	Q02883	468 aa		4.5	□□□□□ -1.69
VPS25	YJR102C	TRS31	Q03337	283 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms