RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	YLR345W	Q06137	509 aa		4.6	□□□□□ -1.67
CDC6	YJL194W	PHO92	Q06390	306 aa		4.6	□□□□□ -1.67
CDC6	YJL194W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
CDC6	YJL194W	KEL3	Q08979	651 aa	Predicted RBP	4.6	□□□□□ -1.67
CDC6	YJL194W	MDY2	Q12285	212 aa		4.6	□□□□□ -1.67
CDC6	YJL194W	SEC39	Q12745	709 aa		4.6	□□□□□ -1.67
CDC6	YJL194W	XRN1	P22147	1528 aa	Known RBP	4.59	□□□□□ -1.67
CDC6	YJL194W	ADH4	P10127	382 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	HSF1	P10961	833 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	SED4	P25365	1065 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	OCA4	P25366	362 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	NTG1	P31378	399 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	PPQ1	P32945	549 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	AFR1	P33304	620 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	GCS1	P35197	352 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
CDC6	YJL194W	SRP68	P38687	599 aa	Known RBP	4.59	□□□□□ -1.67
CDC6	YJL194W	SKN7	P38889	622 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	PNT1	P38969	423 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	LTP1	P40347	161 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	YIL161W	P40449	235 aa	Known RBP	4.59	□□□□□ -1.67
CDC6	YJL194W	SPO22	P40511	975 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	RLP7	P40693	322 aa	Known RBP	4.59	□□□□□ -1.67
CDC6	YJL194W	GCD10	P41814	478 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	LAM5	P43560	674 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	PRY1	P47032	299 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	RRT6	P53117	311 aa	Predicted RBP	4.59	□□□□□ -1.67
CDC6	YJL194W	PIL1	P53252	339 aa	Known RBP	4.59	□□□□□ -1.67
CDC6	YJL194W	RSF1	Q05043	376 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	RPN7	Q06103	429 aa	Known RBP	4.59	□□□□□ -1.67
CDC6	YJL194W	ARV1	Q06541	321 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	GAS5	Q08193	484 aa		4.59	□□□□□ -1.67
CDC6	YJL194W	UFD4	P33202	1483 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	DIF1	O13577	133 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	RPL11A	P0C0W9	174 aa	Known RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	OM45	P16547	393 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	CLB3	P24870	427 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	RRP7	P25368	297 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	POL4	P25615	582 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	ADK2	P26364	225 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	AFG2	P32794	780 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	VPS17	P32913	551 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	SAP190	P36123	1033 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	TAT1	P38085	619 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	ATF1	P40353	525 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	YJR061W	P40355	935 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
CDC6	YJL194W	NUP84	P52891	726 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	ALT1	P52893	592 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	DUO1	P53168	247 aa	Known RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	VPS75	P53853	264 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	ERV25	P54837	211 aa	Known RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	MTD1	Q02046	320 aa	Known RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	DOT1	Q04089	582 aa	Known RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	ERB1	Q04660	807 aa	Known RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	CRR1	Q05790	422 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	MCP2	Q06567	569 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	IWR1	Q07532	353 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	NGL1	Q08213	363 aa	Known RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	CLP1	Q08685	445 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	PCL8	Q08966	492 aa		4.58	□□□□□ -1.68
CDC6	YJL194W	RPL11B	Q3E757	174 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	TCB3	Q03640	1545 aa	Known RBP	4.58	□□□□□ -1.68
CDC6	YJL194W	CPA2	P03965	1118 aa	Known RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	NOT3	P06102	836 aa	Known RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	TPK1	P06244	397 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	YML002W	P0CF17	737 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	LAT1	P12695	482 aa	Known RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	KAR3	P17119	729 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	CYS3	P31373	394 aa	Known RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	DGR2	P32330	852 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	GYP6	P32806	458 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	STB6	P36085	766 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	YBL029W	P38201	376 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	GND1	P38720	489 aa	Known RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	SMC2	P38989	1170 aa	Known RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	STT3	P39007	718 aa	Known RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	SLN1	P39928	1220 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	BUD16	P39988	312 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	MKT1	P40850	830 aa	Known RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	BPL1	P48445	690 aa	Predicted RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	PUS4	P48567	403 aa	Known RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	HFM1	P51979	1187 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	NCS6	P53088	359 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	CUL3	P53202	744 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	YGR130C	P53278	816 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	SPH1	Q06160	661 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	AVO1	Q08236	1176 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	RCN2	Q12044	265 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	RUD3	Q12234	484 aa	Known RBP	4.57	□□□□□ -1.68
CDC6	YJL194W	YBR126W-A	Q8TGU7	68 aa		4.57	□□□□□ -1.68
CDC6	YJL194W	CTT1	P06115	562 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	CDC24	P11433	854 aa	Predicted RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	GLN4	P13188	809 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	PWP1	P21304	576 aa	Known RBP	4.56	□□□□□ -1.68
CDC6	YJL194W	MIH1	P23748	554 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	CLB1	P24868	471 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
CDC6	YJL194W	STE13	P33894	931 aa		4.56	□□□□□ -1.68
CDC6	YJL194W	MAC1	P35192	417 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms