RNA–Protein interactions for RNA: YIR005W

IST3, Transcript of Component of the U2 snRNP, yeast

Gene IST3, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IST3	YIR005W	YJR096W	P47137	282 aa		4.25	□□□□□ -1.73
IST3	YIR005W	SAP4	P53036	818 aa		4.25	□□□□□ -1.73
IST3	YIR005W	SCW4	P53334	386 aa	Known RBP	4.25	□□□□□ -1.73
IST3	YIR005W	RDL1	Q12305	139 aa	Known RBP	4.25	□□□□□ -1.73
IST3	YIR005W	NOP14	Q99207	810 aa	Known RBP	4.25	□□□□□ -1.73
IST3	YIR005W	SEC3	P33332	1336 aa	Known RBP	4.24	□□□□□ -1.73
IST3	YIR005W	URE2	P23202	354 aa	Known RBP	4.24	□□□□□ -1.73
IST3	YIR005W	SEC65	P29478	273 aa		4.24	□□□□□ -1.73
IST3	YIR005W	ASK1	P35734	292 aa		4.24	□□□□□ -1.73
IST3	YIR005W	CCL1	P37366	393 aa		4.24	□□□□□ -1.73
IST3	YIR005W	EXO1	P39875	702 aa		4.24	□□□□□ -1.73
IST3	YIR005W	JHD1	P40034	492 aa		4.24	□□□□□ -1.73
IST3	YIR005W	IDP3	P53982	420 aa	Known RBP	4.24	□□□□□ -1.73
IST3	YIR005W	RPS21B	Q3E754	87 aa	Known RBP	4.24	□□□□□ -1.73
IST3	YIR005W	RPL8A	P17076	256 aa	Known RBP	4.23	□□□□□ -1.73
IST3	YIR005W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
IST3	YIR005W	RGT1	P32862	1170 aa		4.23	□□□□□ -1.73
IST3	YIR005W	ENP2	P48234	707 aa	Known RBP	4.23	□□□□□ -1.73
IST3	YIR005W	YCG1	Q06680	1035 aa		4.23	□□□□□ -1.73
IST3	YIR005W	APM4	Q99186	491 aa		4.23	□□□□□ -1.73
IST3	YIR005W	YTA7	P40340	1379 aa		4.23	□□□□□ -1.73
IST3	YIR005W	GLN4	P13188	809 aa	Known RBP	4.22	□□□□□ -1.73
IST3	YIR005W	PRP19	P32523	503 aa	Known RBP	4.22	□□□□□ -1.73
IST3	YIR005W	OAF3	P36023	863 aa		4.22	□□□□□ -1.73
IST3	YIR005W	HXT6	P39003	570 aa	Known RBP	4.22	□□□□□ -1.73
IST3	YIR005W	HXT7	P39004	570 aa		4.22	□□□□□ -1.73
IST3	YIR005W	LRO1	P40345	661 aa		4.22	□□□□□ -1.73
IST3	YIR005W	TDA10	P42938	290 aa		4.22	□□□□□ -1.73
IST3	YIR005W	USA1	Q03714	838 aa		4.22	□□□□□ -1.73
IST3	YIR005W	SPN1	Q06505	410 aa	Predicted RBP	4.22	□□□□□ -1.73
IST3	YIR005W	ARR3	Q06598	404 aa		4.22	□□□□□ -1.73
IST3	YIR005W	CRC1	Q12289	327 aa		4.22	□□□□□ -1.73
IST3	YIR005W	YLR111W	Q12528	110 aa		4.22	□□□□□ -1.73
IST3	YIR005W	MTC7	P32633	139 aa		4.21	□□□□□ -1.74
IST3	YIR005W	EHT1	P38295	451 aa		4.21	□□□□□ -1.74
IST3	YIR005W	YHR033W	P38690	423 aa		4.21	□□□□□ -1.74
IST3	YIR005W	ECM9	Q02202	377 aa		4.21	□□□□□ -1.74
IST3	YIR005W	WAR1	Q03631	944 aa		4.21	□□□□□ -1.74
IST3	YIR005W	HFI1	Q12060	488 aa		4.21	□□□□□ -1.74
IST3	YIR005W	TUF1	P02992	437 aa	Known RBP	4.2	□□□□□ -1.74
IST3	YIR005W	HMG2	P12684	1045 aa		4.2	□□□□□ -1.74
IST3	YIR005W	YAP1	P19880	650 aa	Known RBP	4.2	□□□□□ -1.74
IST3	YIR005W	MF(ALPHA)2	P32435	120 aa		4.2	□□□□□ -1.74
IST3	YIR005W	VID28	P40547	921 aa		4.2	□□□□□ -1.74
IST3	YIR005W	GZF3	P42944	551 aa	Known RBP	4.2	□□□□□ -1.74
IST3	YIR005W	YDL183C	P48569	320 aa		4.2	□□□□□ -1.74
IST3	YIR005W	YHM2	Q04013	314 aa		4.2	□□□□□ -1.74
IST3	YIR005W	YPT10	P38146	199 aa		4.19	□□□□□ -1.74
IST3	YIR005W	ALG12	P53730	551 aa		4.19	□□□□□ -1.74
IST3	YIR005W	PTA1	Q01329	785 aa	Predicted RBP	4.19	□□□□□ -1.74
IST3	YIR005W	CDC26	P14724	124 aa		4.18	□□□□□ -1.74
IST3	YIR005W	VPS33	P20795	691 aa		4.18	□□□□□ -1.74
IST3	YIR005W	PXL1	P36166	706 aa		4.18	□□□□□ -1.74
IST3	YIR005W	YJL193W	P39542	402 aa		4.18	□□□□□ -1.74
IST3	YIR005W	ENT2	Q05785	613 aa		4.18	□□□□□ -1.74
IST3	YIR005W	PCL8	Q08966	492 aa		4.18	□□□□□ -1.74
IST3	YIR005W	FAT1	P38225	669 aa		4.17	□□□□□ -1.74
IST3	YIR005W	YIL092W	P40497	633 aa		4.17	□□□□□ -1.74
IST3	YIR005W	MTQ2	Q03920	221 aa	Predicted RBP	4.17	□□□□□ -1.74
IST3	YIR005W	TPO3	Q06451	622 aa		4.17	□□□□□ -1.74
IST3	YIR005W	YPR089W	O13585	888 aa		4.16	□□□□□ -1.74
IST3	YIR005W	AAC1	P04710	309 aa		4.16	□□□□□ -1.74
IST3	YIR005W	DID4	P36108	232 aa		4.16	□□□□□ -1.74
IST3	YIR005W	TYS1	P36421	394 aa	Known RBP	4.16	□□□□□ -1.74
IST3	YIR005W	SAE2	P46946	345 aa		4.16	□□□□□ -1.74
IST3	YIR005W	MNN11	P46985	422 aa	Known RBP	4.16	□□□□□ -1.74
IST3	YIR005W	HLJ1	P48353	224 aa		4.16	□□□□□ -1.74
IST3	YIR005W	YPL071C	Q02864	156 aa		4.16	□□□□□ -1.74
IST3	YIR005W	YTM1	Q12024	460 aa	Predicted RBP	4.16	□□□□□ -1.74
IST3	YIR005W	BI2	P03873	423 aa		4.15	□□□□□ -1.75
IST3	YIR005W	YMR085W	P0CF18	432 aa		4.15	□□□□□ -1.75
IST3	YIR005W	YJU2	P28320	278 aa	Predicted RBP	4.15	□□□□□ -1.75
IST3	YIR005W	YMR124W	P39523	943 aa	Known RBP	4.15	□□□□□ -1.75
IST3	YIR005W	LSC1	P53598	329 aa	Known RBP	4.15	□□□□□ -1.75
IST3	YIR005W	NUP53	Q03790	475 aa		4.15	□□□□□ -1.75
IST3	YIR005W	UTP14	Q04500	899 aa	Known RBP	4.15	□□□□□ -1.75
IST3	YIR005W	MRPL1	Q04599	285 aa		4.15	□□□□□ -1.75
IST3	YIR005W	THI73	Q07904	523 aa		4.15	□□□□□ -1.75
IST3	YIR005W	CRT10	Q08226	957 aa		4.15	□□□□□ -1.75
IST3	YIR005W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
IST3	YIR005W	NEW1	Q08972	1196 aa	Known RBP	4.15	□□□□□ -1.75
IST3	YIR005W	ADR1	P07248	1323 aa		4.15	□□□□□ -1.75
IST3	YIR005W	PPG1	P32838	368 aa		4.14	□□□□□ -1.75
IST3	YIR005W	MNN1	P39106	762 aa		4.14	□□□□□ -1.75
IST3	YIR005W	YIL024C	P40543	189 aa		4.14	□□□□□ -1.75
IST3	YIR005W	CFD1	P40558	293 aa		4.14	□□□□□ -1.75
IST3	YIR005W	AHA1	Q12449	350 aa	Known RBP	4.14	□□□□□ -1.75
IST3	YIR005W	RPS21A	P0C0V8	87 aa	Known RBP	4.13	□□□□□ -1.75
IST3	YIR005W	DGR2	P32330	852 aa		4.13	□□□□□ -1.75
IST3	YIR005W	OAF1	P39720	1047 aa	Predicted RBP	4.13	□□□□□ -1.75
IST3	YIR005W	SQS1	P53866	767 aa	Known RBP	4.13	□□□□□ -1.75
IST3	YIR005W	HRD3	Q05787	833 aa		4.13	□□□□□ -1.75
IST3	YIR005W	CYK3	Q07533	885 aa		4.13	□□□□□ -1.75
IST3	YIR005W	HER1	Q12276	1246 aa		4.13	□□□□□ -1.75
IST3	YIR005W	YER190C-B	P0CX94	160 aa		4.12	□□□□□ -1.75
IST3	YIR005W	YEL077W-A	P0CX95	160 aa		4.12	□□□□□ -1.75
IST3	YIR005W	YGR296C-B	P0CX96	160 aa		4.12	□□□□□ -1.75
IST3	YIR005W	YPL283W-B	P0CX97	160 aa		4.12	□□□□□ -1.75
IST3	YIR005W	YPR204C-A	P0CX98	160 aa		4.12	□□□□□ -1.75
IST3	YIR005W	MGM1	P32266	881 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms