RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W PHO11P35842 467 aa2.76□□□□□ -1.97
RPL40AYIL148W VPS24P36095 224 aaKnown RBP2.76□□□□□ -1.97
RPL40AYIL148W MRPL36P36531 177 aa2.76□□□□□ -1.97
RPL40AYIL148W PHO12P38693 467 aa2.76□□□□□ -1.97
RPL40AYIL148W PCL5P38794 229 aa2.76□□□□□ -1.97
RPL40AYIL148W ARG2P40360 574 aa2.76□□□□□ -1.97
RPL40AYIL148W RFX1P48743 811 aa2.76□□□□□ -1.97
RPL40AYIL148W CTR1P49573 406 aa2.76□□□□□ -1.97
RPL40AYIL148W VPS73P53142 486 aaKnown RBP2.76□□□□□ -1.97
RPL40AYIL148W FDC1Q03034 503 aa2.76□□□□□ -1.97
RPL40AYIL148W HLR1Q04429 423 aa2.76□□□□□ -1.97
RPL40AYIL148W THI7Q05998 598 aa2.76□□□□□ -1.97
RPL40AYIL148W YSH1Q06224 779 aaPredicted RBP2.76□□□□□ -1.97
RPL40AYIL148W YDL086WQ07505 273 aa2.76□□□□□ -1.97
RPL40AYIL148W USV1Q12132 391 aa2.76□□□□□ -1.97
RPL40AYIL148W MIS1P09440 975 aaKnown RBP2.75□□□□□ -1.97
RPL40AYIL148W SWC3P31376 625 aa2.75□□□□□ -1.97
RPL40AYIL148W CTP1P38152 299 aa2.75□□□□□ -1.97
RPL40AYIL148W YHL041WP38730 149 aa2.75□□□□□ -1.97
RPL40AYIL148W LNP1P38878 278 aa2.75□□□□□ -1.97
RPL40AYIL148W TMN3P40071 706 aa2.75□□□□□ -1.97
RPL40AYIL148W FTR1P40088 404 aa2.75□□□□□ -1.97
RPL40AYIL148W MPS3P47069 682 aa2.75□□□□□ -1.97
RPL40AYIL148W MNT2P53059 558 aa2.75□□□□□ -1.97
RPL40AYIL148W SPC98P53540 846 aa2.75□□□□□ -1.97
RPL40AYIL148W ATG4P53867 494 aa2.75□□□□□ -1.97
RPL40AYIL148W ARA2Q04212 335 aa2.75□□□□□ -1.97
RPL40AYIL148W TRI1Q05024 226 aa2.75□□□□□ -1.97
RPL40AYIL148W YPL216WQ08964 1102 aa2.75□□□□□ -1.97
RPL40AYIL148W TUP1P16649 713 aa2.74□□□□□ -1.97
RPL40AYIL148W BET2P20133 325 aa2.74□□□□□ -1.97
RPL40AYIL148W TRX2P22803 104 aaKnown RBP2.74□□□□□ -1.97
RPL40AYIL148W RMA1P36001 430 aaKnown RBP2.74□□□□□ -1.97
RPL40AYIL148W ELF1P36053 145 aa2.74□□□□□ -1.97
RPL40AYIL148W GLG1P36143 616 aa2.74□□□□□ -1.97
RPL40AYIL148W APM3P38153 483 aa2.74□□□□□ -1.97
RPL40AYIL148W YLF2P38746 405 aa2.74□□□□□ -1.97
RPL40AYIL148W CRG1P38892 291 aaRIP-Chip data2.74□□□□□ -1.97not detected
RPL40AYIL148W YJL193WP39542 402 aa2.74□□□□□ -1.97
RPL40AYIL148W SWD1P39706 426 aa2.74□□□□□ -1.97
RPL40AYIL148W VFA1P40080 203 aa2.74□□□□□ -1.97
RPL40AYIL148W KHA1P40309 873 aa2.74□□□□□ -1.97
RPL40AYIL148W QRI7P43122 407 aa2.74□□□□□ -1.97
RPL40AYIL148W YGR021WP53212 290 aa2.74□□□□□ -1.97
RPL40AYIL148W YGR151CP53287 111 aa2.74□□□□□ -1.97
RPL40AYIL148W DIP5P53388 608 aa2.74□□□□□ -1.97
RPL40AYIL148W DAK1P54838 584 aaKnown RBP2.74□□□□□ -1.97
RPL40AYIL148W MFM1Q02783 413 aa2.74□□□□□ -1.97
RPL40AYIL148W ARO10Q06408 635 aa2.74□□□□□ -1.97
RPL40AYIL148W PSR2Q07949 397 aa2.74□□□□□ -1.97
RPL40AYIL148W DBP10Q12389 995 aaKnown RBP2.74□□□□□ -1.97
RPL40AYIL148W PHO5P00635 467 aa2.73□□□□□ -1.97
RPL40AYIL148W SIR3P06701 978 aa2.73□□□□□ -1.97
RPL40AYIL148W PIF1P07271 859 aa2.73□□□□□ -1.97
RPL40AYIL148W THR1P17423 357 aaKnown RBP2.73□□□□□ -1.97
RPL40AYIL148W SEC18P18759 758 aaKnown RBP2.73□□□□□ -1.97
RPL40AYIL148W VPS33P20795 691 aa2.73□□□□□ -1.97
RPL40AYIL148W KIN3P22209 435 aa2.73□□□□□ -1.97
RPL40AYIL148W DMC1P25453 334 aa2.73□□□□□ -1.97
RPL40AYIL148W CAP1P28495 268 aaKnown RBP2.73□□□□□ -1.97
RPL40AYIL148W YPT7P32939 208 aa2.73□□□□□ -1.97
RPL40AYIL148W GMH1P36125 273 aa2.73□□□□□ -1.97
RPL40AYIL148W EHT1P38295 451 aa2.73□□□□□ -1.97
RPL40AYIL148W PIH1P38768 344 aa2.73□□□□□ -1.97
RPL40AYIL148W HRB1P38922 454 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
RPL40AYIL148W PMC1P38929 1173 aaPredicted RBP2.73□□□□□ -1.97
RPL40AYIL148W ACA1P39970 489 aa2.73□□□□□ -1.97
RPL40AYIL148W NDC80P40460 691 aa2.73□□□□□ -1.97
RPL40AYIL148W SAP185P40856 1058 aa2.73□□□□□ -1.97
RPL40AYIL148W IML2P47031 731 aa2.73□□□□□ -1.97
RPL40AYIL148W YGR054WP53235 642 aaKnown RBP2.73□□□□□ -1.97
RPL40AYIL148W FHN1P53279 174 aa2.73□□□□□ -1.97
RPL40AYIL148W YNR071CP53757 342 aa2.73□□□□□ -1.97
RPL40AYIL148W TIM50Q02776 476 aa2.73□□□□□ -1.97
RPL40AYIL148W ECM16Q04217 1267 aaKnown RBP2.73□□□□□ -1.97
RPL40AYIL148W UFO1Q04511 668 aa2.73□□□□□ -1.97
RPL40AYIL148W BLS1Q06071 122 aa2.73□□□□□ -1.97
RPL40AYIL148W CRD1Q07560 283 aa2.73□□□□□ -1.97
RPL40AYIL148W TGS1Q12052 315 aa2.73□□□□□ -1.97
RPL40AYIL148W RTK1Q12100 620 aaPredicted RBP2.73□□□□□ -1.97
RPL40AYIL148W SSM4P40318 1319 aa2.72□□□□□ -1.97
RPL40AYIL148W URA3P03962 267 aa2.72□□□□□ -1.97
RPL40AYIL148W MSS18P08593 268 aa2.72□□□□□ -1.97
RPL40AYIL148W ADH4P10127 382 aa2.72□□□□□ -1.97
RPL40AYIL148W POL3P15436 1097 aa2.72□□□□□ -1.97
RPL40AYIL148W PFK2P16862 959 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
RPL40AYIL148W MSM1P22438 575 aa2.72□□□□□ -1.97
RPL40AYIL148W ARG1P22768 420 aa2.72□□□□□ -1.97
RPL40AYIL148W GCD7P32502 381 aaPredicted RBP2.72□□□□□ -1.97
RPL40AYIL148W DSS4P32601 143 aa2.72□□□□□ -1.97
RPL40AYIL148W LOT5P34234 306 aa2.72□□□□□ -1.97
RPL40AYIL148W FUI1P38196 639 aa2.72□□□□□ -1.97
RPL40AYIL148W KSP1P38691 1029 aaKnown RBP2.72□□□□□ -1.97
RPL40AYIL148W PSF2P40359 213 aa2.72□□□□□ -1.97
RPL40AYIL148W CAB2P40506 365 aa2.72□□□□□ -1.97
RPL40AYIL148W MAD2P40958 196 aa2.72□□□□□ -1.97
RPL40AYIL148W SKP2P42843 763 aa2.72□□□□□ -1.97
RPL40AYIL148W IDS2P46958 469 aa2.72□□□□□ -1.97
RPL40AYIL148W MAD3P47074 515 aa2.72□□□□□ -1.97
RPL40AYIL148W GLO1P50107 326 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms