RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C CTI6Q08923 506 aa4.91□□□□□ -1.62
SDS3YIL084C POM34Q12445 299 aa4.91□□□□□ -1.62
SDS3YIL084C YLR278CQ05854 1341 aa4.91□□□□□ -1.62
SDS3YIL084C RPO41P13433 1351 aaKnown RBP4.91□□□□□ -1.62
SDS3YIL084C TOM1Q03280 3268 aa4.9□□□□□ -1.62
SDS3YIL084C RPS9BP05755 195 aaKnown RBP4.9□□□□□ -1.63
SDS3YIL084C HCA4P20448 770 aaKnown RBP4.9□□□□□ -1.63
SDS3YIL084C GRX7P38068 203 aa4.9□□□□□ -1.63
SDS3YIL084C FAT1P38225 669 aa4.9□□□□□ -1.63
SDS3YIL084C VID28P40547 921 aa4.9□□□□□ -1.63
SDS3YIL084C PXA1P41909 870 aa4.9□□□□□ -1.63
SDS3YIL084C YAP1802P53309 568 aa4.9□□□□□ -1.63
SDS3YIL084C YPS7Q06325 596 aa4.9□□□□□ -1.63
SDS3YIL084C YKL033W-AQ86ZR7 236 aa4.9□□□□□ -1.63
SDS3YIL084C COX11P19516 300 aaKnown RBP4.89□□□□□ -1.63
SDS3YIL084C TFC4P33339 1025 aa4.89□□□□□ -1.63
SDS3YIL084C OAR1P35731 278 aa4.89□□□□□ -1.63
SDS3YIL084C PIG2P40187 538 aa4.89□□□□□ -1.63
SDS3YIL084C IES1P43579 692 aa4.89□□□□□ -1.63
SDS3YIL084C BIT61P47041 543 aa4.89□□□□□ -1.63
SDS3YIL084C TIM44Q01852 431 aa4.89□□□□□ -1.63
SDS3YIL084C IOC4Q04213 475 aa4.89□□□□□ -1.63
SDS3YIL084C OMS1Q06668 471 aa4.89□□□□□ -1.63
SDS3YIL084C VPS36Q06696 566 aa4.89□□□□□ -1.63
SDS3YIL084C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
SDS3YIL084C DGR2P32330 852 aa4.88□□□□□ -1.63
SDS3YIL084C PLC1P32383 869 aa4.88□□□□□ -1.63
SDS3YIL084C PPS1P38148 807 aa4.88□□□□□ -1.63
SDS3YIL084C SFB3P38810 929 aa4.88□□□□□ -1.63
SDS3YIL084C PAN2P53010 1115 aaPredicted RBP4.88□□□□□ -1.63
SDS3YIL084C TEL2P53038 688 aa4.88□□□□□ -1.63
SDS3YIL084C RCR2Q03446 210 aaKnown RBP4.88□□□□□ -1.63
SDS3YIL084C NSE5Q03718 556 aa4.88□□□□□ -1.63
SDS3YIL084C THI22Q06490 572 aa4.88□□□□□ -1.63
SDS3YIL084C STP4Q07351 490 aa4.88□□□□□ -1.63
SDS3YIL084C ACF2Q12168 779 aa4.88□□□□□ -1.63
SDS3YIL084C ZRT2Q12436 422 aa4.88□□□□□ -1.63
SDS3YIL084C PMD1P32634 1753 aa4.88□□□□□ -1.63
SDS3YIL084C IME1P21190 360 aa4.87□□□□□ -1.63
SDS3YIL084C PRP28P23394 588 aa4.87□□□□□ -1.63
SDS3YIL084C HIR1P32479 840 aa4.87□□□□□ -1.63
SDS3YIL084C SER1P33330 395 aaKnown RBP4.87□□□□□ -1.63
SDS3YIL084C YHL017WP38745 532 aa4.87□□□□□ -1.63
SDS3YIL084C PEA2P40091 420 aa4.87□□□□□ -1.63
SDS3YIL084C TAF4P50105 388 aa4.87□□□□□ -1.63
SDS3YIL084C YMR206WQ03695 313 aa4.87□□□□□ -1.63
SDS3YIL084C PHM6Q05637 104 aa4.87□□□□□ -1.63
SDS3YIL084C PEX15Q08215 383 aa4.87□□□□□ -1.63
SDS3YIL084C TMA7Q3E764 64 aaKnown RBP4.87□□□□□ -1.63
SDS3YIL084C SIR3P06701 978 aa4.86□□□□□ -1.63
SDS3YIL084C CDC26P14724 124 aa4.86□□□□□ -1.63
SDS3YIL084C ACO1P19414 778 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
SDS3YIL084C ICL1P28240 557 aaPredicted RBP4.86□□□□□ -1.63
SDS3YIL084C HEM12P32347 362 aaPredicted RBP4.86□□□□□ -1.63
SDS3YIL084C YPT7P32939 208 aa4.86□□□□□ -1.63
SDS3YIL084C SRP68P38687 599 aaKnown RBP4.86□□□□□ -1.63
SDS3YIL084C BUD8P41698 603 aa4.86□□□□□ -1.63
SDS3YIL084C SPO1P53541 631 aa4.86□□□□□ -1.63
SDS3YIL084C SSL2Q00578 843 aa4.86□□□□□ -1.63
SDS3YIL084C YLL067CQ07888 1374 aa4.86□□□□□ -1.63
SDS3YIL084C MLP1Q02455 1875 aaKnown RBP4.86□□□□□ -1.63
SDS3YIL084C FEN2P25621 512 aaKnown RBP4.85□□□□□ -1.63
SDS3YIL084C SMY1P32364 656 aaKnown RBP4.85□□□□□ -1.63
SDS3YIL084C MF(ALPHA)2P32435 120 aa4.85□□□□□ -1.63
SDS3YIL084C BCS1P32839 456 aa4.85□□□□□ -1.63
SDS3YIL084C YHR033WP38690 423 aa4.85□□□□□ -1.63
SDS3YIL084C YIL077CP40508 320 aa4.85□□□□□ -1.63
SDS3YIL084C PEX8P53248 589 aa4.85□□□□□ -1.63
SDS3YIL084C HOL1P53389 586 aa4.85□□□□□ -1.63
SDS3YIL084C HBT1Q07653 1046 aaKnown RBP4.85□□□□□ -1.63
SDS3YIL084C NGL1Q08213 363 aaKnown RBP4.85□□□□□ -1.63
SDS3YIL084C CHS5Q12114 671 aaKnown RBP4.85□□□□□ -1.63
SDS3YIL084C SIR4P11978 1358 aa4.85□□□□□ -1.63
SDS3YIL084C OSM1P21375 501 aaKnown RBP4.84□□□□□ -1.63
SDS3YIL084C ATP12P22135 325 aa4.84□□□□□ -1.63
SDS3YIL084C NTH1P32356 751 aa4.84□□□□□ -1.63
SDS3YIL084C SEC6P32844 805 aa4.84□□□□□ -1.63
SDS3YIL084C PHO11P35842 467 aa4.84□□□□□ -1.63
SDS3YIL084C COS111P38308 924 aa4.84□□□□□ -1.63
SDS3YIL084C CBR1P38626 284 aaKnown RBP4.84□□□□□ -1.63
SDS3YIL084C PHO12P38693 467 aa4.84□□□□□ -1.63
SDS3YIL084C PCL5P38794 229 aa4.84□□□□□ -1.63
SDS3YIL084C HRB1P38922 454 aaKnown RBP RIP-Chip data4.84□□□□□ -1.63not detected
SDS3YIL084C UBA2P52488 636 aa4.84□□□□□ -1.63
SDS3YIL084C SND1Q04007 877 aa4.84□□□□□ -1.63
SDS3YIL084C YML133CQ03099 1374 aa4.83□□□□□ -1.64
SDS3YIL084C YLL066CQ99208 1374 aa4.83□□□□□ -1.64
SDS3YIL084C ABF1P14164 731 aa4.83□□□□□ -1.64
SDS3YIL084C HXT4P32467 576 aa4.83□□□□□ -1.64
SDS3YIL084C FHN1P53279 174 aa4.83□□□□□ -1.64
SDS3YIL084C YFT2Q06676 274 aa4.83□□□□□ -1.64
SDS3YIL084C MCH5Q08777 521 aa4.83□□□□□ -1.64
SDS3YIL084C NYV1Q12255 253 aa4.83□□□□□ -1.64
SDS3YIL084C PRE4P30657 266 aa4.82□□□□□ -1.64
SDS3YIL084C NOP2P40991 618 aaKnown RBP4.82□□□□□ -1.64
SDS3YIL084C BUD27P43573 796 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
SDS3YIL084C RFX1P48743 811 aa4.82□□□□□ -1.64
SDS3YIL084C STB4P50104 949 aa4.82□□□□□ -1.64
SDS3YIL084C MUK1Q02866 612 aa4.82□□□□□ -1.64
SDS3YIL084C ECM38Q05902 660 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms