RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTM1	YHR109W	MRPL36	P36531	177 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	BCD1	P38772	366 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	SKN7	P38889	622 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	LYS9	P38999	446 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	MEF2	P39677	819 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	FKH2	P41813	862 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	POL31	P46957	487 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	CRD1	Q07560	283 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	KIN82	P25341	720 aa		4.13	□□□□□ -1.75
CTM1	YHR109W	CNS1	P33313	385 aa		4.13	□□□□□ -1.75
CTM1	YHR109W	YKR073C	P36153	106 aa		4.13	□□□□□ -1.75
CTM1	YHR109W	VFA1	P40080	203 aa		4.13	□□□□□ -1.75
CTM1	YHR109W	RIC1	P40395	1056 aa		4.13	□□□□□ -1.75
CTM1	YHR109W	YIL077C	P40508	320 aa		4.13	□□□□□ -1.75
CTM1	YHR109W	VPS62	P53285	467 aa		4.13	□□□□□ -1.75
CTM1	YHR109W	ORC3	P54790	616 aa		4.13	□□□□□ -1.75
CTM1	YHR109W	DUS4	Q06063	367 aa		4.13	□□□□□ -1.75
CTM1	YHR109W	TPK1	P06244	397 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	HOM3	P10869	527 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	MRP7	P12687	371 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	KAR4	P25583	335 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	CMK1	P27466	446 aa	Known RBP	4.12	□□□□□ -1.75
CTM1	YHR109W	DHR2	P36009	735 aa	Predicted RBP	4.12	□□□□□ -1.75
CTM1	YHR109W	PLB1	P39105	664 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	ECM1	P39715	212 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	PSP1	P50896	841 aa	Known RBP	4.12	□□□□□ -1.75
CTM1	YHR109W	RSC1	P53236	928 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	SPO1	P53541	631 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	MRPL19	P53875	158 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	CTK1	Q03957	528 aa	Known RBP	4.12	□□□□□ -1.75
CTM1	YHR109W	YKU80	Q04437	629 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	GSF2	Q04697	403 aa	Known RBP	4.12	□□□□□ -1.75
CTM1	YHR109W	VIP1	Q06685	1146 aa	Known RBP	4.12	□□□□□ -1.75
CTM1	YHR109W	DIA2	Q08496	732 aa	Predicted RBP	4.12	□□□□□ -1.75
CTM1	YHR109W	TAH18	Q12181	623 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	TRM11	Q12463	433 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	HSH49	Q99181	213 aa	Predicted RBP	4.12	□□□□□ -1.75
CTM1	YHR109W	CBF2	P32504	956 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	CTF13	P35203	478 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	NUP120	P35729	1037 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	ESL2	P36168	1195 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	COS111	P38308	924 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	NPR3	P38742	1146 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	SNO2	P53823	222 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	TRS31	Q03337	283 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	SPC19	Q03954	165 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	RXT3	Q07458	294 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	AIM41	Q12032	185 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	SUL2	Q12325	893 aa		4.12	□□□□□ -1.75
CTM1	YHR109W	PRE2	P30656	287 aa	Known RBP	4.11	□□□□□ -1.75
CTM1	YHR109W	TMN3	P40071	706 aa		4.11	□□□□□ -1.75
CTM1	YHR109W	CCT8	P47079	568 aa	Known RBP	4.11	□□□□□ -1.75
CTM1	YHR109W	SGM1	P47166	707 aa		4.11	□□□□□ -1.75
CTM1	YHR109W	IMA1	P53051	589 aa		4.11	□□□□□ -1.75
CTM1	YHR109W	COG1	P53079	417 aa		4.11	□□□□□ -1.75
CTM1	YHR109W	ATG21	Q02887	496 aa		4.11	□□□□□ -1.75
CTM1	YHR109W	STP3	Q05937	343 aa		4.11	□□□□□ -1.75
CTM1	YHR109W	THI22	Q06490	572 aa		4.11	□□□□□ -1.75
CTM1	YHR109W	RRG1	Q12167	365 aa	Predicted RBP	4.11	□□□□□ -1.75
CTM1	YHR109W	RPP2A	P05319	106 aa	Known RBP	4.1	□□□□□ -1.75
CTM1	YHR109W	PEX1	P24004	1043 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	PGS1	P25578	521 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	FEN2	P25621	512 aa	Known RBP	4.1	□□□□□ -1.75
CTM1	YHR109W	BLI1	P35727	113 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	FSH1	P38777	243 aa	Known RBP	4.1	□□□□□ -1.75
CTM1	YHR109W	FMO1	P38866	432 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	BST1	P43571	1029 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	LSB3	P43603	459 aa	Known RBP	4.1	□□□□□ -1.75
CTM1	YHR109W	RFX1	P48743	811 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	GCN5	Q03330	439 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	VPS64	Q03944	604 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	YLR287C	Q05881	355 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	YLR224W	Q05947	369 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	ADY4	Q05955	493 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	YFT2	Q06676	274 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	NOP12	Q08208	459 aa	Known RBP	4.1	□□□□□ -1.75
CTM1	YHR109W	MED7	Q08278	222 aa		4.1	□□□□□ -1.75
CTM1	YHR109W	YLR302C	O13544	120 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	SEM1	O94742	89 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	CTT1	P06115	562 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	FUR1	P18562	216 aa	Known RBP	4.09	□□□□□ -1.75
CTM1	YHR109W	CDC20	P26309	610 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	BCS1	P32839	456 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	TFC3	P34111	1160 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	PSD1	P39006	500 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	TPA1	P40032	644 aa	Known RBP	4.09	□□□□□ -1.75
CTM1	YHR109W	KHA1	P40309	873 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	ZAP1	P47043	880 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	TAM41	P53230	385 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	ARE2	P53629	642 aa	Known RBP	4.09	□□□□□ -1.75
CTM1	YHR109W	BSC5	P53755	489 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	SYF1	Q04048	859 aa	Predicted RBP	4.09	□□□□□ -1.75
CTM1	YHR109W	TAF11	Q04226	346 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	MFB1	Q04922	465 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	HOF1	Q05080	669 aa		4.09	□□□□□ -1.75
CTM1	YHR109W	ACK1	Q07622	623 aa	Predicted RBP	4.09	□□□□□ -1.75
CTM1	YHR109W	RVB2	Q12464	471 aa	Known RBP	4.09	□□□□□ -1.75
CTM1	YHR109W	YCR015C	P25616	317 aa		4.09	□□□□□ -1.76
CTM1	YHR109W	YBR225W	P38321	900 aa		4.09	□□□□□ -1.76
CTM1	YHR109W	ICP55	P40051	511 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 85.4 ms