RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W PAH1P32567 862 aa8.15□□□□□ -1.1
YRF1-3YGR296W GIC1P38785 314 aa8.15□□□□□ -1.1
YRF1-3YGR296W LCP5P40079 357 aaPredicted RBP8.15□□□□□ -1.1
YRF1-3YGR296W UFE1P41834 346 aa8.15□□□□□ -1.1
YRF1-3YGR296W YJL007CP47080 104 aa8.15□□□□□ -1.1
YRF1-3YGR296W ESBP6P53918 673 aa8.15□□□□□ -1.1
YRF1-3YGR296W GAS5Q08193 484 aa8.15□□□□□ -1.1
YRF1-3YGR296W FBP1P09201 348 aa8.15□□□□□ -1.1
YRF1-3YGR296W PHO87P25360 923 aa8.15□□□□□ -1.1
YRF1-3YGR296W PYC2P32327 1180 aaKnown RBP8.15□□□□□ -1.1
YRF1-3YGR296W HES1P35843 434 aa8.15□□□□□ -1.1
YRF1-3YGR296W YLR177WQ06251 628 aa8.15□□□□□ -1.1
YRF1-3YGR296W TRX1P22217 103 aaKnown RBP8.15□□□□□ -1.1
YRF1-3YGR296W BCS1P32839 456 aa8.15□□□□□ -1.1
YRF1-3YGR296W SEC31P38968 1273 aaKnown RBP8.15□□□□□ -1.1
YRF1-3YGR296W PDS1P40316 373 aaPredicted RBP8.15□□□□□ -1.1
YRF1-3YGR296W MSC2Q03455 724 aa8.15□□□□□ -1.1
YRF1-3YGR296W YDR109CQ04585 715 aa8.15□□□□□ -1.1
YRF1-3YGR296W NOP6Q07623 225 aaKnown RBP8.15□□□□□ -1.1
YRF1-3YGR296W PCD1Q12524 340 aa8.15□□□□□ -1.1
YRF1-3YGR296W COX11P19516 300 aaKnown RBP8.15□□□□□ -1.11
YRF1-3YGR296W GLG1P36143 616 aa8.15□□□□□ -1.11
YRF1-3YGR296W MUD2P36084 527 aaKnown RBP8.14□□□□□ -1.11
YRF1-3YGR296W ERT1P38140 529 aa8.14□□□□□ -1.11
YRF1-3YGR296W PRM2P40534 656 aa8.14□□□□□ -1.11
YRF1-3YGR296W AIP1P46680 615 aaKnown RBP8.14□□□□□ -1.11
YRF1-3YGR296W PGC1Q08959 321 aa8.14□□□□□ -1.11
YRF1-3YGR296W ACM1Q08981 209 aa8.14□□□□□ -1.11
YRF1-3YGR296W MCD1Q12158 566 aa8.14□□□□□ -1.11
YRF1-3YGR296W YVC1Q12324 675 aa8.14□□□□□ -1.11
YRF1-3YGR296W PTC3P34221 468 aaKnown RBP8.14□□□□□ -1.11
YRF1-3YGR296W GIP1P38229 639 aa8.14□□□□□ -1.11
YRF1-3YGR296W ERC1P38767 581 aa8.14□□□□□ -1.11
YRF1-3YGR296W SAH1P39954 449 aaKnown RBP8.14□□□□□ -1.11
YRF1-3YGR296W TMA20P89886 181 aaPredicted RBP8.14□□□□□ -1.11
YRF1-3YGR296W REG1Q00816 1014 aa8.14□□□□□ -1.11
YRF1-3YGR296W YLL007CQ07799 665 aa8.14□□□□□ -1.11
YRF1-3YGR296W TFB4Q12004 338 aa8.14□□□□□ -1.11
YRF1-3YGR296W SSC1P0CS90 654 aaKnown RBP8.14□□□□□ -1.11
YRF1-3YGR296W TIM23P32897 222 aa8.14□□□□□ -1.11
YRF1-3YGR296W IMP4P53941 290 aaKnown RBP8.14□□□□□ -1.11
YRF1-3YGR296W RPN8Q08723 338 aaKnown RBP8.14□□□□□ -1.11
YRF1-3YGR296W NCR1Q12200 1170 aa8.14□□□□□ -1.11
YRF1-3YGR296W MRP8P35719 219 aa8.14□□□□□ -1.11
YRF1-3YGR296W EAP1P36041 632 aaKnown RBP8.14□□□□□ -1.11
YRF1-3YGR296W BRL1P38770 471 aa8.14□□□□□ -1.11
YRF1-3YGR296W MMF1P40185 145 aaKnown RBP8.14□□□□□ -1.11
YRF1-3YGR296W YGL036WP53185 909 aaPredicted RBP8.14□□□□□ -1.11
YRF1-3YGR296W TIF6Q12522 245 aaKnown RBP8.14□□□□□ -1.11
YRF1-3YGR296W RPL6BP05739 176 aaKnown RBP8.13□□□□□ -1.11
YRF1-3YGR296W ASP3-2P0CX77 362 aa8.13□□□□□ -1.11
YRF1-3YGR296W ASP3-3P0CX78 362 aa8.13□□□□□ -1.11
YRF1-3YGR296W ASP3-4P0CX79 362 aa8.13□□□□□ -1.11
YRF1-3YGR296W ASP3-1P0CZ17 362 aa8.13□□□□□ -1.11
YRF1-3YGR296W NIP1P32497 812 aaKnown RBP8.13□□□□□ -1.11
YRF1-3YGR296W ARC35P53731 342 aaKnown RBP8.13□□□□□ -1.11
YRF1-3YGR296W ARG7Q04728 441 aa8.13□□□□□ -1.11
YRF1-3YGR296W NUP192P47054 1683 aa8.13□□□□□ -1.11
YRF1-3YGR296W APE3P37302 537 aaKnown RBP8.13□□□□□ -1.11
YRF1-3YGR296W CSR2Q12734 1121 aa8.13□□□□□ -1.11
YRF1-3YGR296W SST2P11972 698 aaKnown RBP8.13□□□□□ -1.11
YRF1-3YGR296W DOM34P33309 386 aa8.13□□□□□ -1.11
YRF1-3YGR296W ERP5P38819 212 aa8.13□□□□□ -1.11
YRF1-3YGR296W GIM3P53900 129 aa8.13□□□□□ -1.11
YRF1-3YGR296W SPG3Q04398 127 aaPredicted RBP8.13□□□□□ -1.11
YRF1-3YGR296W UTP18P40362 594 aaPredicted RBP8.13□□□□□ -1.11
YRF1-3YGR296W RSM7P47150 247 aa8.13□□□□□ -1.11
YRF1-3YGR296W YJR142WP47173 342 aa8.13□□□□□ -1.11
YRF1-3YGR296W COG2P53271 262 aa8.13□□□□□ -1.11
YRF1-3YGR296W MSS51P32335 436 aa8.13□□□□□ -1.11
YRF1-3YGR296W APN2P38207 520 aa8.13□□□□□ -1.11
YRF1-3YGR296W TDA11P38854 504 aa8.13□□□□□ -1.11
YRF1-3YGR296W MGS1P40151 587 aa8.13□□□□□ -1.11
YRF1-3YGR296W RPS7BP48164 190 aaKnown RBP8.13□□□□□ -1.11
YRF1-3YGR296W ADA2Q02336 434 aa8.13□□□□□ -1.11
YRF1-3YGR296W HOT1Q03213 719 aa8.13□□□□□ -1.11
YRF1-3YGR296W SGE1P33335 543 aa8.12□□□□□ -1.11
YRF1-3YGR296W HSL7P38274 827 aa8.12□□□□□ -1.11
YRF1-3YGR296W YGR283CP53336 341 aaPredicted RBP8.12□□□□□ -1.11
YRF1-3YGR296W PIG1Q06216 648 aa8.12□□□□□ -1.11
YRF1-3YGR296W SLP1Q12232 587 aa8.12□□□□□ -1.11
YRF1-3YGR296W RRD2Q12461 358 aa8.12□□□□□ -1.11
YRF1-3YGR296W MSS116P15424 664 aaKnown RBP8.12□□□□□ -1.11
YRF1-3YGR296W RCO1Q04779 684 aa8.12□□□□□ -1.11
YRF1-3YGR296W DGR2P32330 852 aa8.12□□□□□ -1.11
YRF1-3YGR296W TRM5P38793 499 aa8.12□□□□□ -1.11
YRF1-3YGR296W NOP19P53317 196 aaPredicted RBP8.12□□□□□ -1.11
YRF1-3YGR296W HDA3Q06623 655 aa8.12□□□□□ -1.11
YRF1-3YGR296W DED1P06634 604 aaKnown RBP8.12□□□□□ -1.11
YRF1-3YGR296W NPP1P25353 742 aa8.12□□□□□ -1.11
YRF1-3YGR296W PHA2P32452 334 aa8.12□□□□□ -1.11
YRF1-3YGR296W RAD54P32863 898 aa8.12□□□□□ -1.11
YRF1-3YGR296W RFS1P38234 210 aaKnown RBP8.12□□□□□ -1.11
YRF1-3YGR296W ARC1P46672 376 aaKnown RBP8.12□□□□□ -1.11
YRF1-3YGR296W HOS2P53096 452 aaPredicted RBP8.12□□□□□ -1.11
YRF1-3YGR296W NAN1Q02931 896 aaKnown RBP8.12□□□□□ -1.11
YRF1-3YGR296W UBX5Q06682 500 aa8.12□□□□□ -1.11
YRF1-3YGR296W STB6P36085 766 aa8.11□□□□□ -1.11
YRF1-3YGR296W VPS25P47142 202 aa8.11□□□□□ -1.11
YRF1-3YGR296W CDC14Q00684 551 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms