RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	AIP1	P46680	615 aa	Known RBP	3.55	□□□□□ -1.84
CCM1	YGR150C	DSD1	P53095	428 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	SNF12	P53628	566 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	NOG2	P53742	486 aa	Known RBP	3.55	□□□□□ -1.84
CCM1	YGR150C	JJJ1	P53863	590 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	SFB2	P53953	876 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	PRO2	P54885	456 aa	Known RBP	3.55	□□□□□ -1.84
CCM1	YGR150C	PHM7	Q12252	991 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	MDY2	Q12285	212 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	YBR126W-A	Q8TGU7	68 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	KAR3	P17119	729 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	DGR2	P32330	852 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	MAC1	P35192	417 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	PCH2	P38126	564 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	SPT8	P38915	602 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	PSD1	P39006	500 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	YER158C	P40095	573 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	ZIM17	P42844	174 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	MSB3	P48566	633 aa	Predicted RBP	3.55	□□□□□ -1.84
CCM1	YGR150C	NUP84	P52891	726 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	ARP4	P80428	489 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	RRN5	Q02983	363 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	CRR1	Q05790	422 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	DBP9	Q06218	594 aa	Known RBP	3.55	□□□□□ -1.84
CCM1	YGR150C	DIN7	Q12086	430 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	NMD4	Q12129	218 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	PSY3	Q12318	242 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	NSI1	Q12457	570 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	YOR111W	Q99210	232 aa		3.55	□□□□□ -1.84
CCM1	YGR150C	ADE3	P07245	946 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	VPS17	P32913	551 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	SPT23	P35210	1082 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	OTU2	P38747	307 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	MTG2	P38860	518 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	VPS45	P38932	577 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	LYS9	P38999	446 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	NPP2	P39997	493 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	FMP10	P40098	244 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	MKT1	P40850	830 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	SHR5	P41912	237 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	FET5	P43561	622 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	ARC1	P46672	376 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	GCV2	P49095	1034 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	HFM1	P51979	1187 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	HAS1	Q03532	505 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	RBA50	Q04418	439 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	YML082W	Q04533	649 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	YOR059C	Q08448	450 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	SOG2	Q08817	791 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	YPL277C	Q08989	487 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	YLL058W	Q12198	575 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	YLR149C	Q99296	730 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	CDC19	P00549	500 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	CDC24	P11433	854 aa	Predicted RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	DBP3	P20447	523 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	FRD1	P32614	470 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	TIF5	P38431	405 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	CTM1	P38818	585 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	BEM4	P39011	633 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	YAR028W	P39548	234 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	ATF1	P40353	525 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	EFM4	P40516	257 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	SSU1	P41930	458 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	NUP85	P46673	744 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	MNT2	P53059	558 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	YNR071C	P53757	342 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	NGL3	Q03210	505 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	YAP6	Q03935	383 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	YLR407W	Q06070	228 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	RIP-Chip
CCM1	YGR150C	RCN2	Q12044	265 aa		3.54	□□□□□ -1.84
CCM1	YGR150C	SPE3	Q12074	293 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	RTC5	Q12108	567 aa	Known RBP	3.54	□□□□□ -1.84
CCM1	YGR150C	TUB2	P02557	457 aa	Known RBP	3.53	□□□□□ -1.84
CCM1	YGR150C	CTT1	P06115	562 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	CDC4	P07834	779 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
CCM1	YGR150C	PWP1	P21304	576 aa	Known RBP	3.53	□□□□□ -1.84
CCM1	YGR150C	YCK1	P23291	538 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	RIT1	P23796	513 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	SUR1	P33300	382 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	ATG19	P35193	415 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	UGA2	P38067	497 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	QNS1	P38795	714 aa	Known RBP	3.53	□□□□□ -1.84
CCM1	YGR150C	FLC2	P39719	783 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	RAD17	P48581	401 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	IMA1	P53051	589 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	RPN14	P53196	417 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	MEC3	Q02574	474 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	GIS4	Q04233	774 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	TAP42	Q04372	366 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	MGR3	Q04472	501 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	SKG3	Q06315	1026 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	RSB1	Q08417	382 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	NBP2	Q12163	236 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	GPM3	Q12326	303 aa		3.53	□□□□□ -1.84
CCM1	YGR150C	MRPL25	P23369	157 aa		3.53	□□□□□ -1.85
CCM1	YGR150C	PEP3	P27801	918 aa		3.53	□□□□□ -1.85
CCM1	YGR150C	URA7	P28274	579 aa	Known RBP	3.53	□□□□□ -1.85
CCM1	YGR150C	CAP1	P28495	268 aa	Known RBP	3.53	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms