RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W YGR237CP50089 785 aa3.05□□□□□ -1.92
NIC96YFR002W HLR1Q04429 423 aa3.05□□□□□ -1.92
NIC96YFR002W ARG7Q04728 441 aa3.05□□□□□ -1.92
NIC96YFR002W ULA1Q12059 462 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-HO13535 1793 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-DR5P0C2I2 1755 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-DR6P0C2I3 1755 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-LR2P0C2I5 1755 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-LR3P0C2I6 1755 aaKnown RBP3.05□□□□□ -1.92
NIC96YFR002W TY1B-PR1P0C2I9 1755 aaKnown RBP3.05□□□□□ -1.92
NIC96YFR002W TY1B-PR2P0C2J0 1756 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-PR3P0C2J1 1755 aaKnown RBP3.05□□□□□ -1.92
NIC96YFR002W TY2B-LR1P0C2J3 1770 aa3.05□□□□□ -1.92
NIC96YFR002W TY2B-FP0CX63 1770 aa3.05□□□□□ -1.92
NIC96YFR002W TY2B-GR2P0CX64 1770 aa3.05□□□□□ -1.92
NIC96YFR002W TY2B-CP25384 1770 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-JR1P47098 1755 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-ML2Q03434 1755 aaKnown RBP3.05□□□□□ -1.92
NIC96YFR002W TY2B-DR2Q03494 1770 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-ER1Q03612 1755 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-DR1Q03855 1755 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-ML1Q04711 1755 aaKnown RBP3.05□□□□□ -1.92
NIC96YFR002W TY2B-DR3Q07791 1770 aaKnown RBP3.05□□□□□ -1.92
NIC96YFR002W TY2B-OR1Q12113 1770 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-GR2Q12269 1755 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-OLQ12273 1755 aa3.05□□□□□ -1.92
NIC96YFR002W TY1B-PLQ12414 1755 aaKnown RBP3.05□□□□□ -1.92
NIC96YFR002W TY2B-DR1Q12472 1770 aa3.05□□□□□ -1.92
NIC96YFR002W TY2B-OR2Q12501 1770 aa3.05□□□□□ -1.92
NIC96YFR002W ADE5,7P07244 802 aaKnown RBP3.05□□□□□ -1.92
NIC96YFR002W ACO1P19414 778 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
NIC96YFR002W YDL183CP48569 320 aa3.05□□□□□ -1.92
NIC96YFR002W YGR054WP53235 642 aaKnown RBP3.05□□□□□ -1.92
NIC96YFR002W PTA1Q01329 785 aaPredicted RBP3.05□□□□□ -1.92
NIC96YFR002W FMP30Q02883 468 aa3.05□□□□□ -1.92
NIC96YFR002W TRS23Q03784 219 aa3.05□□□□□ -1.92
NIC96YFR002W NUP159P40477 1460 aa3.05□□□□□ -1.92
NIC96YFR002W DAK1P54838 584 aaKnown RBP3.04□□□□□ -1.92
NIC96YFR002W EFR3Q03653 782 aaKnown RBP3.04□□□□□ -1.92
NIC96YFR002W SLK19Q08581 821 aaKnown RBP3.04□□□□□ -1.92
NIC96YFR002W FAP7Q12055 197 aaPredicted RBP3.04□□□□□ -1.92
NIC96YFR002W DNF3Q12674 1656 aa3.04□□□□□ -1.92
NIC96YFR002W SER1P33330 395 aaKnown RBP3.04□□□□□ -1.92
NIC96YFR002W PPE1P38796 400 aa3.04□□□□□ -1.92
NIC96YFR002W YIP4P53093 235 aa3.04□□□□□ -1.92
NIC96YFR002W CPR8P53728 308 aa3.04□□□□□ -1.92
NIC96YFR002W HOF1Q05080 669 aa3.04□□□□□ -1.92
NIC96YFR002W BUD3P25558 1636 aa3.03□□□□□ -1.92
NIC96YFR002W DAL3P32459 195 aa3.03□□□□□ -1.92
NIC96YFR002W EHT1P38295 451 aa3.03□□□□□ -1.92
NIC96YFR002W YHR033WP38690 423 aa3.03□□□□□ -1.92
NIC96YFR002W RIM13Q03792 727 aa3.03□□□□□ -1.92
NIC96YFR002W RPO21P04050 1733 aaKnown RBP3.03□□□□□ -1.92
NIC96YFR002W AAD3P25612 363 aa3.03□□□□□ -1.92
NIC96YFR002W HXT4P32467 576 aa3.03□□□□□ -1.92
NIC96YFR002W TAX4P47030 604 aa3.03□□□□□ -1.92
NIC96YFR002W YCG1Q06680 1035 aa3.03□□□□□ -1.92
NIC96YFR002W MMS22Q06164 1454 aa3.02□□□□□ -1.93
NIC96YFR002W ERG11P10614 530 aa3.02□□□□□ -1.93
NIC96YFR002W ATP12P22135 325 aa3.02□□□□□ -1.93
NIC96YFR002W PIP2P52960 996 aa3.02□□□□□ -1.93
NIC96YFR002W RPS15Q01855 142 aaKnown RBP3.02□□□□□ -1.93
NIC96YFR002W SEG1Q04279 960 aa3.02□□□□□ -1.93
NIC96YFR002W ARR3Q06598 404 aa3.02□□□□□ -1.93
NIC96YFR002W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
NIC96YFR002W HMG2P12684 1045 aa3.02□□□□□ -1.93
NIC96YFR002W HOP1P20050 605 aa3.02□□□□□ -1.93
NIC96YFR002W CNE1P27825 502 aa3.02□□□□□ -1.93
NIC96YFR002W DOS2P54858 310 aa3.02□□□□□ -1.93
NIC96YFR002W MFM1Q02783 413 aa3.02□□□□□ -1.93
NIC96YFR002W CEF1Q03654 590 aaPredicted RBP3.02□□□□□ -1.93
NIC96YFR002W PMA2P19657 947 aa3.01□□□□□ -1.93
NIC96YFR002W MBR1P23493 339 aa3.01□□□□□ -1.93
NIC96YFR002W LRO1P40345 661 aa3.01□□□□□ -1.93
NIC96YFR002W THI6P41835 540 aa3.01□□□□□ -1.93
NIC96YFR002W BUD17P53727 317 aa3.01□□□□□ -1.93
NIC96YFR002W YNL018CP53976 612 aa3.01□□□□□ -1.93
NIC96YFR002W ZPS1Q12512 249 aa3.01□□□□□ -1.93
NIC96YFR002W UBP12P39538 1254 aa3.01□□□□□ -1.93
NIC96YFR002W GPP2P40106 250 aaKnown RBP3.01□□□□□ -1.93
NIC96YFR002W SNM1P40993 198 aa3.01□□□□□ -1.93
NIC96YFR002W ENP2P48234 707 aaKnown RBP3.01□□□□□ -1.93
NIC96YFR002W AFT2Q08957 416 aa3.01□□□□□ -1.93
NIC96YFR002W AIM41Q12032 185 aa3.01□□□□□ -1.93
NIC96YFR002W PGK1P00560 416 aaKnown RBP3□□□□□ -1.93
NIC96YFR002W CPA2P03965 1118 aaKnown RBP3□□□□□ -1.93
NIC96YFR002W RMA1P36001 430 aaKnown RBP3□□□□□ -1.93
NIC96YFR002W YEL025CP39991 1188 aa3□□□□□ -1.93
NIC96YFR002W SNT2P53127 1403 aa3□□□□□ -1.93
NIC96YFR002W NGL1Q08213 363 aaKnown RBP3□□□□□ -1.93
NIC96YFR002W AI5_ALPHAQ9ZZX1 630 aa3□□□□□ -1.93
NIC96YFR002W TY2B-BQ12491 1770 aa3□□□□□ -1.93
NIC96YFR002W HAP1P0CE41 1502 aa3□□□□□ -1.93
NIC96YFR002W DGR2P32330 852 aa3□□□□□ -1.93
NIC96YFR002W DHR2P36009 735 aaPredicted RBP3□□□□□ -1.93
NIC96YFR002W HOT13P36078 116 aa3□□□□□ -1.93
NIC96YFR002W RIM4P38741 713 aa3□□□□□ -1.93
NIC96YFR002W PIH1P38768 344 aa3□□□□□ -1.93
NIC96YFR002W BNA3P47039 444 aaKnown RBP3□□□□□ -1.93
NIC96YFR002W TY1B-NL2Q99337 1749 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms