RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	NEW1	Q08972	1196 aa	Known RBP	2.49	□□□□□ -2.01
CSN9	YDR179C	AQY1	P0CD91	305 aa		2.48	□□□□□ -2.01
CSN9	YDR179C	CCL1	P37366	393 aa		2.48	□□□□□ -2.01
CSN9	YDR179C	PRM2	P40534	656 aa		2.48	□□□□□ -2.01
CSN9	YDR179C	IES1	P43579	692 aa		2.48	□□□□□ -2.01
CSN9	YDR179C	RPS15	Q01855	142 aa	Known RBP	2.48	□□□□□ -2.01
CSN9	YDR179C	RSC9	Q03124	581 aa		2.48	□□□□□ -2.01
CSN9	YDR179C	SPN1	Q06505	410 aa	Predicted RBP	2.48	□□□□□ -2.01
CSN9	YDR179C	PRS5	Q12265	496 aa	Known RBP	2.48	□□□□□ -2.01
CSN9	YDR179C	FRE7	Q12333	620 aa		2.48	□□□□□ -2.01
CSN9	YDR179C	BI2	P03873	423 aa		2.47	□□□□□ -2.01
CSN9	YDR179C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	2.47	□□□□□ -2.01	not detected
CSN9	YDR179C	RNR3	P21672	869 aa	Known RBP	2.47	□□□□□ -2.01
CSN9	YDR179C	PXL1	P36166	706 aa		2.47	□□□□□ -2.01
CSN9	YDR179C	TDA10	P42938	290 aa		2.47	□□□□□ -2.01
CSN9	YDR179C	YFL015C	P43578	164 aa		2.47	□□□□□ -2.01
CSN9	YDR179C	YGR153W	P48238	217 aa		2.47	□□□□□ -2.01
CSN9	YDR179C	SAP4	P53036	818 aa		2.47	□□□□□ -2.01
CSN9	YDR179C	LSC1	P53598	329 aa	Known RBP	2.47	□□□□□ -2.01
CSN9	YDR179C	WAR1	Q03631	944 aa		2.47	□□□□□ -2.01
CSN9	YDR179C	USA1	Q03714	838 aa		2.47	□□□□□ -2.01
CSN9	YDR179C	NUP53	Q03790	475 aa		2.47	□□□□□ -2.01
CSN9	YDR179C	CRC1	Q12289	327 aa		2.47	□□□□□ -2.01
CSN9	YDR179C	YPR089W	O13585	888 aa		2.46	□□□□□ -2.02
CSN9	YDR179C	SEC65	P29478	273 aa		2.46	□□□□□ -2.02
CSN9	YDR179C	MGM1	P32266	881 aa		2.46	□□□□□ -2.02
CSN9	YDR179C	RRP14	P36080	434 aa	Known RBP	2.46	□□□□□ -2.02
CSN9	YDR179C	LRO1	P40345	661 aa		2.46	□□□□□ -2.02
CSN9	YDR179C	BST1	P43571	1029 aa		2.46	□□□□□ -2.02
CSN9	YDR179C	TIM50	Q02776	476 aa		2.46	□□□□□ -2.02
CSN9	YDR179C	UTP14	Q04500	899 aa	Known RBP	2.46	□□□□□ -2.02
CSN9	YDR179C	APM4	Q99186	491 aa		2.46	□□□□□ -2.02
CSN9	YDR179C	NOP14	Q99207	810 aa	Known RBP	2.46	□□□□□ -2.02
CSN9	YDR179C	AAC1	P04710	309 aa		2.45	□□□□□ -2.02
CSN9	YDR179C	YAP1	P19880	650 aa	Known RBP	2.45	□□□□□ -2.02
CSN9	YDR179C	VPS33	P20795	691 aa		2.45	□□□□□ -2.02
CSN9	YDR179C	DID4	P36108	232 aa		2.45	□□□□□ -2.02
CSN9	YDR179C	CDS1	P38221	457 aa		2.45	□□□□□ -2.02
CSN9	YDR179C	RRP8	P38961	392 aa	Known RBP	2.45	□□□□□ -2.02
CSN9	YDR179C	YMR124W	P39523	943 aa	Known RBP	2.45	□□□□□ -2.02
CSN9	YDR179C	YJL193W	P39542	402 aa		2.45	□□□□□ -2.02
CSN9	YDR179C	CFD1	P40558	293 aa		2.45	□□□□□ -2.02
CSN9	YDR179C	GZF3	P42944	551 aa	Known RBP	2.45	□□□□□ -2.02
CSN9	YDR179C	PTA1	Q01329	785 aa	Predicted RBP	2.45	□□□□□ -2.02
CSN9	YDR179C	TPO3	Q06451	622 aa		2.45	□□□□□ -2.02
CSN9	YDR179C	ARR3	Q06598	404 aa		2.45	□□□□□ -2.02
CSN9	YDR179C	YCG1	Q06680	1035 aa		2.45	□□□□□ -2.02
CSN9	YDR179C	CRT10	Q08226	957 aa		2.45	□□□□□ -2.02
CSN9	YDR179C	SEC12	P11655	471 aa		2.44	□□□□□ -2.02
CSN9	YDR179C	MF(ALPHA)2	P32435	120 aa		2.44	□□□□□ -2.02
CSN9	YDR179C	PRP19	P32523	503 aa	Known RBP	2.44	□□□□□ -2.02
CSN9	YDR179C	YHR033W	P38690	423 aa		2.44	□□□□□ -2.02
CSN9	YDR179C	RAD26	P40352	1085 aa		2.44	□□□□□ -2.02
CSN9	YDR179C	YJR096W	P47137	282 aa		2.44	□□□□□ -2.02
CSN9	YDR179C	YPL071C	Q02864	156 aa		2.44	□□□□□ -2.02
CSN9	YDR179C	YLR111W	Q12528	110 aa		2.44	□□□□□ -2.02
CSN9	YDR179C	YOR111W	Q99210	232 aa		2.44	□□□□□ -2.02
CSN9	YDR179C	HMG2	P12684	1045 aa		2.43	□□□□□ -2.02
CSN9	YDR179C	GLN4	P13188	809 aa	Known RBP	2.43	□□□□□ -2.02
CSN9	YDR179C	RPL8A	P17076	256 aa	Known RBP	2.43	□□□□□ -2.02
CSN9	YDR179C	AEP2	P22136	580 aa		2.43	□□□□□ -2.02
CSN9	YDR179C	OAF3	P36023	863 aa		2.43	□□□□□ -2.02
CSN9	YDR179C	YPT10	P38146	199 aa		2.43	□□□□□ -2.02
CSN9	YDR179C	CCT4	P39078	528 aa	Known RBP	2.43	□□□□□ -2.02
CSN9	YDR179C	IRC7	P43623	340 aa		2.43	□□□□□ -2.02
CSN9	YDR179C	MTD1	Q02046	320 aa	Known RBP	2.43	□□□□□ -2.02
CSN9	YDR179C	YHM2	Q04013	314 aa		2.43	□□□□□ -2.02
CSN9	YDR179C	YTM1	Q12024	460 aa	Predicted RBP	2.43	□□□□□ -2.02
CSN9	YDR179C	HFI1	Q12060	488 aa		2.43	□□□□□ -2.02
CSN9	YDR179C	AHA1	Q12449	350 aa	Known RBP	2.43	□□□□□ -2.02
CSN9	YDR179C	SEC3	P33332	1336 aa	Known RBP	2.42	□□□□□ -2.02
CSN9	YDR179C	YTA7	P40340	1379 aa		2.42	□□□□□ -2.02
CSN9	YDR179C	BET2	P20133	325 aa		2.42	□□□□□ -2.02
CSN9	YDR179C	DGR2	P32330	852 aa		2.42	□□□□□ -2.02
CSN9	YDR179C	HXT6	P39003	570 aa	Known RBP	2.42	□□□□□ -2.02
CSN9	YDR179C	HXT7	P39004	570 aa		2.42	□□□□□ -2.02
CSN9	YDR179C	YIL024C	P40543	189 aa		2.42	□□□□□ -2.02
CSN9	YDR179C	VID28	P40547	921 aa		2.42	□□□□□ -2.02
CSN9	YDR179C	CIR1	P42940	261 aa		2.42	□□□□□ -2.02
CSN9	YDR179C	SAE2	P46946	345 aa		2.42	□□□□□ -2.02
CSN9	YDR179C	MNN11	P46985	422 aa	Known RBP	2.42	□□□□□ -2.02
CSN9	YDR179C	HLJ1	P48353	224 aa		2.42	□□□□□ -2.02
CSN9	YDR179C	SQS1	P53866	767 aa	Known RBP	2.42	□□□□□ -2.02
CSN9	YDR179C	ECM9	Q02202	377 aa		2.42	□□□□□ -2.02
CSN9	YDR179C	RPS21B	Q3E754	87 aa	Known RBP	2.42	□□□□□ -2.02
CSN9	YDR179C	CET1	O13297	549 aa	Predicted RBP	2.41	□□□□□ -2.02
CSN9	YDR179C	CBP3	P21560	335 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	COQ3	P27680	312 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	MTC7	P32633	139 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	TYS1	P36421	394 aa	Known RBP	2.41	□□□□□ -2.02
CSN9	YDR179C	EHT1	P38295	451 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	YAT2	P40017	923 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	LAS21	P40367	830 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	YDL183C	P48569	320 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	PEF1	P53238	335 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	COP1	P53622	1201 aa	Known RBP	2.41	□□□□□ -2.02
CSN9	YDR179C	VTC3	Q02725	835 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	HRD3	Q05787	833 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	BUD7	Q08754	746 aa		2.41	□□□□□ -2.02
CSN9	YDR179C	HER1	Q12276	1246 aa		2.41	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 9 ms