RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W RTA1P53047 317 aa12.72□□□□□ -0.37
PTP1YDL230W GTR1Q00582 310 aa12.72□□□□□ -0.37
PTP1YDL230W TIF35Q04067 274 aaKnown RBP12.72□□□□□ -0.37
PTP1YDL230W SPC24Q04477 213 aa12.72□□□□□ -0.37
PTP1YDL230W GAC1P28006 793 aa12.71□□□□□ -0.37
PTP1YDL230W PSE1P32337 1089 aaKnown RBP12.71□□□□□ -0.37
PTP1YDL230W AIM26P32858 118 aa12.71□□□□□ -0.37
PTP1YDL230W CSE2P33308 149 aa12.71□□□□□ -0.37
PTP1YDL230W HSM3P38348 480 aa12.71□□□□□ -0.37
PTP1YDL230W POL31P46957 487 aa12.71□□□□□ -0.37
PTP1YDL230W LIA1P47120 325 aaKnown RBP12.71□□□□□ -0.37
PTP1YDL230W TAF6P53040 516 aa12.71□□□□□ -0.37
PTP1YDL230W TPO1Q07824 586 aa12.71□□□□□ -0.37
PTP1YDL230W CIR2Q08822 631 aa12.71□□□□□ -0.37
PTP1YDL230W TIF6Q12522 245 aaKnown RBP12.71□□□□□ -0.37
PTP1YDL230W AI5_ALPHAQ9ZZX1 630 aa12.71□□□□□ -0.37
PTP1YDL230W CIT2P08679 460 aa12.7□□□□□ -0.38
PTP1YDL230W VPS3P23643 1011 aa12.7□□□□□ -0.38
PTP1YDL230W MLS1P30952 554 aa12.7□□□□□ -0.38
PTP1YDL230W YHL026CP38740 315 aa12.7□□□□□ -0.38
PTP1YDL230W ERP5P38819 212 aa12.7□□□□□ -0.38
PTP1YDL230W YFL012WP43580 148 aa12.7□□□□□ -0.38
PTP1YDL230W RFX1P48743 811 aa12.7□□□□□ -0.38
PTP1YDL230W YGR127WP53275 312 aa12.7□□□□□ -0.38
PTP1YDL230W STP1Q00947 519 aa12.7□□□□□ -0.38
PTP1YDL230W SKY1Q03656 742 aa12.7□□□□□ -0.38
PTP1YDL230W RCL1Q08096 367 aaPredicted RBP12.7□□□□□ -0.38
PTP1YDL230W OSW1Q08692 278 aa12.7□□□□□ -0.38
PTP1YDL230W YOR131CQ12486 218 aa12.7□□□□□ -0.38
PTP1YDL230W CYS3P31373 394 aaKnown RBP12.69□□□□□ -0.38
PTP1YDL230W RIM4P38741 713 aa12.69□□□□□ -0.38
PTP1YDL230W REV7P38927 245 aa12.69□□□□□ -0.38
PTP1YDL230W ALD5P40047 520 aaKnown RBP12.69□□□□□ -0.38
PTP1YDL230W YJL107CP42947 387 aa12.69□□□□□ -0.38
PTP1YDL230W PAN2P53010 1115 aaPredicted RBP12.69□□□□□ -0.38
PTP1YDL230W YNL011CP53980 444 aa12.69□□□□□ -0.38
PTP1YDL230W CUE5Q08412 411 aaKnown RBP12.69□□□□□ -0.38
PTP1YDL230W REC8Q12188 680 aa12.69□□□□□ -0.38
PTP1YDL230W MAM3Q12296 706 aa12.69□□□□□ -0.38
PTP1YDL230W GPM3Q12326 303 aa12.69□□□□□ -0.38
PTP1YDL230W YPT6Q99260 215 aa12.69□□□□□ -0.38
PTP1YDL230W PAB1P04147 577 aaKnown RBP RIP-Chip data12.68□□□□□ -0.38not detected
PTP1YDL230W TPK1P06244 397 aa12.68□□□□□ -0.38
PTP1YDL230W RAD3P06839 778 aa12.68□□□□□ -0.38
PTP1YDL230W VAN1P23642 535 aa12.68□□□□□ -0.38
PTP1YDL230W TSR4P25040 408 aa12.68□□□□□ -0.38
PTP1YDL230W UTR2P32623 467 aa12.68□□□□□ -0.38
PTP1YDL230W KES1P35844 434 aaKnown RBP12.68□□□□□ -0.38
PTP1YDL230W MRPL7P36519 292 aa12.68□□□□□ -0.38
PTP1YDL230W STL1P39932 569 aa12.68□□□□□ -0.38
PTP1YDL230W PSF2P40359 213 aa12.68□□□□□ -0.38
PTP1YDL230W PRK1P40494 810 aa12.68□□□□□ -0.38
PTP1YDL230W VTC4P47075 721 aa12.68□□□□□ -0.38
PTP1YDL230W PCL10P53124 433 aa12.68□□□□□ -0.38
PTP1YDL230W LSC1P53598 329 aaKnown RBP12.68□□□□□ -0.38
PTP1YDL230W CBC2Q08920 208 aaKnown RBP RIP-Chip data12.68□□□□□ -0.38not detected
PTP1YDL230W DDC1Q08949 612 aa12.68□□□□□ -0.38
PTP1YDL230W SLP1Q12232 587 aa12.68□□□□□ -0.38
PTP1YDL230W GID7P25569 745 aa12.67□□□□□ -0.38
PTP1YDL230W COY1P34237 679 aa12.67□□□□□ -0.38
PTP1YDL230W KDX1P36005 433 aa12.67□□□□□ -0.38
PTP1YDL230W AIM18P38884 321 aa12.67□□□□□ -0.38
PTP1YDL230W STN1P38960 494 aa12.67□□□□□ -0.38
PTP1YDL230W MND2P40577 368 aa12.67□□□□□ -0.38
PTP1YDL230W SPC98P53540 846 aa12.67□□□□□ -0.38
PTP1YDL230W SLU7Q02775 382 aaKnown RBP12.67□□□□□ -0.38
PTP1YDL230W YPL062WQ02781 134 aa12.67□□□□□ -0.38
PTP1YDL230W RNY1Q02933 434 aaKnown RBP12.67□□□□□ -0.38
PTP1YDL230W TFB2Q02939 513 aa12.67□□□□□ -0.38
PTP1YDL230W RCR2Q03446 210 aaKnown RBP12.67□□□□□ -0.38
PTP1YDL230W TIF1P10081 395 aaKnown RBP12.66□□□□□ -0.38
PTP1YDL230W RPC19P28000 142 aaKnown RBP12.66□□□□□ -0.38
PTP1YDL230W YSC84P32793 468 aa12.66□□□□□ -0.38
PTP1YDL230W MRE11P32829 692 aa12.66□□□□□ -0.38
PTP1YDL230W ALT2P52892 507 aa12.66□□□□□ -0.38
PTP1YDL230W NNF2P53253 936 aa12.66□□□□□ -0.38
PTP1YDL230W YPR003CP53394 754 aa12.66□□□□□ -0.38
PTP1YDL230W KTR6P54070 446 aa12.66□□□□□ -0.38
PTP1YDL230W ADI1Q03677 179 aa12.66□□□□□ -0.38
PTP1YDL230W YSH1Q06224 779 aaPredicted RBP12.66□□□□□ -0.38
PTP1YDL230W GAL80P04387 435 aa12.65□□□□□ -0.38
PTP1YDL230W ERR1P0CX10 437 aa12.65□□□□□ -0.38
PTP1YDL230W ERR2P0CX11 437 aa12.65□□□□□ -0.38
PTP1YDL230W URA10P30402 227 aa12.65□□□□□ -0.38
PTP1YDL230W RAD5P32849 1169 aaPredicted RBP12.65□□□□□ -0.38
PTP1YDL230W STE13P33894 931 aa12.65□□□□□ -0.38
PTP1YDL230W YBR053CP38235 358 aa12.65□□□□□ -0.38
PTP1YDL230W SHE3P38272 425 aaKnown RBP12.65□□□□□ -0.38
PTP1YDL230W BIT2P38346 545 aa12.65□□□□□ -0.38
PTP1YDL230W RFC3P38629 340 aa12.65□□□□□ -0.38
PTP1YDL230W OTU2P38747 307 aaKnown RBP12.65□□□□□ -0.38
PTP1YDL230W YDR089WP38966 869 aa12.65□□□□□ -0.38
PTP1YDL230W YJL206CP39529 758 aa12.65□□□□□ -0.38
PTP1YDL230W CDC1P40986 491 aa12.65□□□□□ -0.38
PTP1YDL230W ERR3P42222 437 aa12.65□□□□□ -0.38
PTP1YDL230W HST2P53686 357 aa12.65□□□□□ -0.38
PTP1YDL230W SLT2Q00772 484 aa12.65□□□□□ -0.38
PTP1YDL230W HOT1Q03213 719 aa12.65□□□□□ -0.38
PTP1YDL230W SND1Q04007 877 aa12.65□□□□□ -0.38
PTP1YDL230W MDM20Q12387 796 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms