RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C URA1P28272 314 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C MEI4P29467 408 aa1.12□□□□□ -2.23
VAM6YDL077C CAM1P29547 415 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C NTG1P31378 399 aa1.12□□□□□ -2.23
VAM6YDL077C NIC96P34077 839 aa1.12□□□□□ -2.23
VAM6YDL077C YKL100CP34248 587 aa1.12□□□□□ -2.23
VAM6YDL077C YPT52P36018 234 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C POP8P38208 133 aa1.12□□□□□ -2.23
VAM6YDL077C SSF1P38789 453 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C RTC3P38804 111 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C TDA11P38854 504 aa1.12□□□□□ -2.23
VAM6YDL077C PEX18P38855 283 aa1.12□□□□□ -2.23
VAM6YDL077C NMD3P38861 518 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C BFR1P38934 470 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
VAM6YDL077C MSS4P38994 779 aa1.12□□□□□ -2.23
VAM6YDL077C PCF11P39081 626 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C RPH1P39956 796 aa1.12□□□□□ -2.23
VAM6YDL077C SIT1P39980 628 aa1.12□□□□□ -2.23
VAM6YDL077C RIC1P40395 1056 aa1.12□□□□□ -2.23
VAM6YDL077C QDR2P40474 542 aa1.12□□□□□ -2.23
VAM6YDL077C PRK1P40494 810 aa1.12□□□□□ -2.23
VAM6YDL077C GAT1P43574 510 aa1.12□□□□□ -2.23
VAM6YDL077C FMP33P46998 180 aa1.12□□□□□ -2.23
VAM6YDL077C IML2P47031 731 aa1.12□□□□□ -2.23
VAM6YDL077C LSM8P47093 109 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C AIM24P47127 394 aa1.12□□□□□ -2.23
VAM6YDL077C RSM26P47141 266 aa1.12□□□□□ -2.23
VAM6YDL077C YJR107WP47145 328 aa1.12□□□□□ -2.23
VAM6YDL077C YJR142WP47173 342 aa1.12□□□□□ -2.23
VAM6YDL077C RIM21P48565 533 aa1.12□□□□□ -2.23
VAM6YDL077C ATP22P50273 684 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C MND1P53102 219 aa1.12□□□□□ -2.23
VAM6YDL077C PCL10P53124 433 aa1.12□□□□□ -2.23
VAM6YDL077C RRP46P53256 223 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C ALD6P54115 500 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C ORC3P54790 616 aa1.12□□□□□ -2.23
VAM6YDL077C ECM23Q02710 187 aa1.12□□□□□ -2.23
VAM6YDL077C NGL3Q03210 505 aa1.12□□□□□ -2.23
VAM6YDL077C HOT1Q03213 719 aa1.12□□□□□ -2.23
VAM6YDL077C YDR239CQ03780 787 aa1.12□□□□□ -2.23
VAM6YDL077C PHM6Q05637 104 aa1.12□□□□□ -2.23
VAM6YDL077C CRR1Q05790 422 aa1.12□□□□□ -2.23
VAM6YDL077C ARO10Q06408 635 aa1.12□□□□□ -2.23
VAM6YDL077C YPR196WQ06595 470 aa1.12□□□□□ -2.23
VAM6YDL077C YPR091CQ06833 770 aa1.12□□□□□ -2.23
VAM6YDL077C LOT6Q07923 191 aa1.12□□□□□ -2.23
VAM6YDL077C BRX1Q08235 291 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C GAS4Q08271 471 aa1.12□□□□□ -2.23
VAM6YDL077C SNX3Q08826 162 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C VPS54Q12071 889 aa1.12□□□□□ -2.23
VAM6YDL077C EMP46Q12396 444 aa1.12□□□□□ -2.23
VAM6YDL077C ERP4Q12450 207 aa1.12□□□□□ -2.23
VAM6YDL077C Q0182Q9ZZW1 134 aa1.12□□□□□ -2.23
VAM6YDL077C FAS2P19097 1887 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C FUR4P05316 633 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C PEP5P12868 1029 aa1.12□□□□□ -2.23
VAM6YDL077C FRS2P15625 503 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C CDC23P16522 626 aa1.12□□□□□ -2.23
VAM6YDL077C RDS2P19541 446 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C RET1P22276 1149 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C SWI4P25302 1093 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C HCM1P25364 564 aa1.12□□□□□ -2.23
VAM6YDL077C NAM7P30771 971 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C MLF3P32047 452 aa1.12□□□□□ -2.23
VAM6YDL077C EUG1P32474 517 aa1.12□□□□□ -2.23
VAM6YDL077C PRP19P32523 503 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C SSE2P32590 693 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C SFA1P32771 386 aa1.12□□□□□ -2.23
VAM6YDL077C YBL010CP32788 280 aa1.12□□□□□ -2.23
VAM6YDL077C GYP6P32806 458 aa1.12□□□□□ -2.23
VAM6YDL077C MRE11P32829 692 aa1.12□□□□□ -2.23
VAM6YDL077C SEC66P33754 206 aa1.12□□□□□ -2.23
VAM6YDL077C YBL055CP34220 418 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C BMH2P34730 273 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C ANR2P36090 516 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C LAS1P36146 502 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C MRPL37P36532 105 aa1.12□□□□□ -2.23
VAM6YDL077C ETR1P38071 380 aa1.12□□□□□ -2.23
VAM6YDL077C GDT1P38301 280 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C MSC7P38694 644 aa1.12□□□□□ -2.23
VAM6YDL077C RPN10P38886 268 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C GIM4P40005 111 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C ALG5P40350 334 aa1.12□□□□□ -2.23
VAM6YDL077C ELP2P42935 788 aa1.12□□□□□ -2.23
VAM6YDL077C TDA10P42938 290 aa1.12□□□□□ -2.23
VAM6YDL077C SAD1P43589 448 aa1.12□□□□□ -2.23
VAM6YDL077C MIC19P43594 170 aa1.12□□□□□ -2.23
VAM6YDL077C CCC1P47818 322 aa1.12□□□□□ -2.23
VAM6YDL077C BRO1P48582 844 aa1.12□□□□□ -2.23
VAM6YDL077C TAF6P53040 516 aa1.12□□□□□ -2.23
VAM6YDL077C MNP1P53163 194 aaPredicted RBP1.12□□□□□ -2.23
VAM6YDL077C YGR266WP53326 701 aa1.12□□□□□ -2.23
VAM6YDL077C HHO1P53551 258 aa1.12□□□□□ -2.23
VAM6YDL077C DMA2P53924 522 aa1.12□□□□□ -2.23
VAM6YDL077C VAC7P53950 1165 aa1.12□□□□□ -2.23
VAM6YDL077C ERG5P54781 538 aa1.12□□□□□ -2.23
VAM6YDL077C MDM1Q01846 1127 aa1.12□□□□□ -2.23
VAM6YDL077C MAK10Q02197 733 aa1.12□□□□□ -2.23
VAM6YDL077C RPL6AQ02326 176 aaKnown RBP1.12□□□□□ -2.23
VAM6YDL077C FMN1Q03778 218 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms