RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA1	YCR097W	WAR1	Q03631	944 aa		4.15	□□□□□ -1.75
HMRA1	YCR097W	HLR1	Q04429	423 aa		4.15	□□□□□ -1.75
HMRA1	YCR097W	SCW10	Q04951	389 aa		4.15	□□□□□ -1.75
HMRA1	YCR097W	SNA4	Q07549	140 aa		4.15	□□□□□ -1.75
HMRA1	YCR097W	ATO2	P32907	282 aa		4.14	□□□□□ -1.75
HMRA1	YCR097W	YPT10	P38146	199 aa		4.14	□□□□□ -1.75
HMRA1	YCR097W	BFA1	P47113	574 aa		4.14	□□□□□ -1.75
HMRA1	YCR097W	COP1	P53622	1201 aa	Known RBP	4.14	□□□□□ -1.75
HMRA1	YCR097W	STP4	Q07351	490 aa		4.14	□□□□□ -1.75
HMRA1	YCR097W	YPT1	P01123	206 aa	Known RBP	4.13	□□□□□ -1.75
HMRA1	YCR097W	HOP1	P20050	605 aa		4.13	□□□□□ -1.75
HMRA1	YCR097W	YCP4	P25349	247 aa	Known RBP	4.13	□□□□□ -1.75
HMRA1	YCR097W	ENP2	P48234	707 aa	Known RBP	4.13	□□□□□ -1.75
HMRA1	YCR097W	LYS20	P48570	428 aa	Known RBP	4.13	□□□□□ -1.75
HMRA1	YCR097W	YTH1	Q06102	208 aa	Predicted RBP	4.13	□□□□□ -1.75
HMRA1	YCR097W	AIM44	Q99299	758 aa		4.13	□□□□□ -1.75
HMRA1	YCR097W	CAP1	P28495	268 aa	Known RBP	4.12	□□□□□ -1.75
HMRA1	YCR097W	CDS1	P38221	457 aa		4.12	□□□□□ -1.75
HMRA1	YCR097W	IRC7	P43623	340 aa		4.12	□□□□□ -1.75
HMRA1	YCR097W	YPL071C	Q02864	156 aa		4.12	□□□□□ -1.75
HMRA1	YCR097W	YEL076C-A	P0CX16	216 aa		4.11	□□□□□ -1.75
HMRA1	YCR097W	YLR464W	P0CX17	216 aa		4.11	□□□□□ -1.75
HMRA1	YCR097W	CCL1	P37366	393 aa		4.11	□□□□□ -1.75
HMRA1	YCR097W	YEL076C	P39971	216 aa		4.11	□□□□□ -1.75
HMRA1	YCR097W	YEL025C	P39991	1188 aa		4.11	□□□□□ -1.75
HMRA1	YCR097W	YIL092W	P40497	633 aa		4.11	□□□□□ -1.75
HMRA1	YCR097W	RPL15B	P54780	204 aa	Predicted RBP	4.11	□□□□□ -1.75
HMRA1	YCR097W	RPN4	Q03465	531 aa		4.11	□□□□□ -1.75
HMRA1	YCR097W	NUP82	P40368	713 aa		4.1	□□□□□ -1.75
HMRA1	YCR097W	TAF4	P50105	388 aa		4.1	□□□□□ -1.75
HMRA1	YCR097W	HRD3	Q05787	833 aa		4.1	□□□□□ -1.75
HMRA1	YCR097W	PCL8	Q08966	492 aa		4.1	□□□□□ -1.75
HMRA1	YCR097W	YLR125W	Q12138	136 aa		4.1	□□□□□ -1.75
HMRA1	YCR097W	SWI6	P09959	803 aa		4.09	□□□□□ -1.75
HMRA1	YCR097W	AIM17	P23180	465 aa	Known RBP	4.09	□□□□□ -1.75
HMRA1	YCR097W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
HMRA1	YCR097W	NNF1	P47149	201 aa		4.09	□□□□□ -1.75
HMRA1	YCR097W	MET13	P53128	600 aa		4.09	□□□□□ -1.75
HMRA1	YCR097W	USA1	Q03714	838 aa		4.09	□□□□□ -1.75
HMRA1	YCR097W	RPS17A	P02407	136 aa	Known RBP	4.08	□□□□□ -1.76
HMRA1	YCR097W	RPS17B	P14127	136 aa	Known RBP	4.08	□□□□□ -1.76
HMRA1	YCR097W	YJU2	P28320	278 aa	Predicted RBP	4.08	□□□□□ -1.76
HMRA1	YCR097W	BUD6	P41697	788 aa		4.08	□□□□□ -1.76
HMRA1	YCR097W	MDV1	P47025	714 aa		4.08	□□□□□ -1.76
HMRA1	YCR097W	NOP7	P53261	605 aa	Known RBP	4.08	□□□□□ -1.76
HMRA1	YCR097W	ARR3	Q06598	404 aa		4.08	□□□□□ -1.76
HMRA1	YCR097W	GUD1	Q07729	489 aa		4.08	□□□□□ -1.76
HMRA1	YCR097W	YOL098C	Q12496	1037 aa		4.08	□□□□□ -1.76
HMRA1	YCR097W	BI2	P03873	423 aa		4.07	□□□□□ -1.76
HMRA1	YCR097W	PHO2	P07269	559 aa		4.07	□□□□□ -1.76
HMRA1	YCR097W	PHO8	P11491	566 aa		4.07	□□□□□ -1.76
HMRA1	YCR097W	DUN1	P39009	513 aa		4.07	□□□□□ -1.76
HMRA1	YCR097W	NSE5	Q03718	556 aa		4.07	□□□□□ -1.76
HMRA1	YCR097W	MTG2	P38860	518 aa		4.06	□□□□□ -1.76
HMRA1	YCR097W	PRM2	P40534	656 aa		4.06	□□□□□ -1.76
HMRA1	YCR097W	YIR016W	P40572	265 aa		4.06	□□□□□ -1.76
HMRA1	YCR097W	NOP15	P53927	220 aa	Predicted RBP	4.06	□□□□□ -1.76
HMRA1	YCR097W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
HMRA1	YCR097W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
HMRA1	YCR097W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
HMRA1	YCR097W	COQ3	P27680	312 aa		4.05	□□□□□ -1.76
HMRA1	YCR097W	THI4	P32318	326 aa		4.05	□□□□□ -1.76
HMRA1	YCR097W	LRO1	P40345	661 aa		4.05	□□□□□ -1.76
HMRA1	YCR097W	BOP3	P53958	396 aa		4.05	□□□□□ -1.76
HMRA1	YCR097W	AHA1	Q12449	350 aa	Known RBP	4.05	□□□□□ -1.76
HMRA1	YCR097W	AAC1	P04710	309 aa		4.04	□□□□□ -1.76
HMRA1	YCR097W	YKL091C	P33324	310 aa	Known RBP	4.04	□□□□□ -1.76
HMRA1	YCR097W	EHT1	P38295	451 aa		4.04	□□□□□ -1.76
HMRA1	YCR097W	YLR001C	Q07895	862 aa		4.04	□□□□□ -1.76
HMRA1	YCR097W	AIM41	Q12032	185 aa		4.04	□□□□□ -1.76
HMRA1	YCR097W	GND1	P38720	489 aa	Known RBP	4.03	□□□□□ -1.76
HMRA1	YCR097W	IES1	P43579	692 aa		4.03	□□□□□ -1.76
HMRA1	YCR097W	YGL260W	P53056	76 aa		4.03	□□□□□ -1.76
HMRA1	YCR097W	AAT1	Q01802	451 aa		4.03	□□□□□ -1.76
HMRA1	YCR097W	GRS2	Q06817	618 aa		4.03	□□□□□ -1.76
HMRA1	YCR097W	NRT1	Q08485	598 aa		4.03	□□□□□ -1.76
HMRA1	YCR097W	UBX3	Q12229	455 aa		4.03	□□□□□ -1.76
HMRA1	YCR097W	YCR043C	P25361	127 aa		4.02	□□□□□ -1.77
HMRA1	YCR097W	YIL152W	P40455	235 aa		4.02	□□□□□ -1.77
HMRA1	YCR097W	RET2	P43621	546 aa		4.02	□□□□□ -1.77
HMRA1	YCR097W	YCG1	Q06680	1035 aa		4.02	□□□□□ -1.77
HMRA1	YCR097W	CYK3	Q07533	885 aa		4.02	□□□□□ -1.77
HMRA1	YCR097W	ATX2	Q12067	313 aa		4.02	□□□□□ -1.77
HMRA1	YCR097W	RPT3	P33298	428 aa	Known RBP	4.01	□□□□□ -1.77
HMRA1	YCR097W	TDA3	P38758	523 aa		4.01	□□□□□ -1.77
HMRA1	YCR097W	NTG2	Q08214	380 aa		4.01	□□□□□ -1.77
HMRA1	YCR097W	PNO1	Q99216	274 aa	Known RBP	4.01	□□□□□ -1.77
HMRA1	YCR097W	CET1	O13297	549 aa	Predicted RBP	4	□□□□□ -1.77
HMRA1	YCR097W	MTC7	P32633	139 aa		4	□□□□□ -1.77
HMRA1	YCR097W	YDL183C	P48569	320 aa		4	□□□□□ -1.77
HMRA1	YCR097W	YPK1	P12688	680 aa	Known RBP	3.99	□□□□□ -1.77
HMRA1	YCR097W	MAK32	P23060	363 aa		3.99	□□□□□ -1.77
HMRA1	YCR097W	IMD2	P38697	523 aa	Known RBP	3.99	□□□□□ -1.77
HMRA1	YCR097W	RTT107	P38850	1070 aa		3.99	□□□□□ -1.77
HMRA1	YCR097W	TES1	P41903	349 aa	Known RBP	3.99	□□□□□ -1.77
HMRA1	YCR097W	IMD3	P50095	523 aa	Known RBP	3.99	□□□□□ -1.77
HMRA1	YCR097W	YHR033W	P38690	423 aa		3.98	□□□□□ -1.77
HMRA1	YCR097W	YJL193W	P39542	402 aa		3.98	□□□□□ -1.77
HMRA1	YCR097W	YNL058C	P53947	316 aa		3.98	□□□□□ -1.77
HMRA1	YCR097W	SNU56	Q03782	492 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 96.1 ms