RNA–Protein interactions for RNA: YBR194W

AIM4, Transcript of Protein proposed to be associated with the nuclear pore complex, yeast

Gene AIM4, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AIM4	YBR194W	PXA1	P41909	870 aa		3.51	□□□□□ -1.85
AIM4	YBR194W	DIP5	P53388	608 aa		3.51	□□□□□ -1.85
AIM4	YBR194W	SPC98	P53540	846 aa		3.51	□□□□□ -1.85
AIM4	YBR194W	NOP15	P53927	220 aa	Predicted RBP	3.51	□□□□□ -1.85
AIM4	YBR194W	YDR179W-A	Q03983	463 aa		3.51	□□□□□ -1.85
AIM4	YBR194W	UFO1	Q04511	668 aa		3.51	□□□□□ -1.85
AIM4	YBR194W	LEU2	P04173	364 aa	Predicted RBP	3.5	□□□□□ -1.85
AIM4	YBR194W	SEC65	P29478	273 aa		3.5	□□□□□ -1.85
AIM4	YBR194W	YMC1	P32331	307 aa		3.5	□□□□□ -1.85
AIM4	YBR194W	SSH4	P32343	579 aa		3.5	□□□□□ -1.85
AIM4	YBR194W	DAL3	P32459	195 aa		3.5	□□□□□ -1.85
AIM4	YBR194W	MTC7	P32633	139 aa		3.5	□□□□□ -1.85
AIM4	YBR194W	YHL041W	P38730	149 aa		3.5	□□□□□ -1.85
AIM4	YBR194W	HIS6	P40545	261 aa		3.5	□□□□□ -1.85
AIM4	YBR194W	ENP2	P48234	707 aa	Known RBP	3.5	□□□□□ -1.85
AIM4	YBR194W	ASN1	P49089	572 aa	Known RBP	3.5	□□□□□ -1.85
AIM4	YBR194W	YRB30	P53107	440 aa	Predicted RBP	3.5	□□□□□ -1.85
AIM4	YBR194W	YGL117W	P53133	265 aa		3.5	□□□□□ -1.85
AIM4	YBR194W	SPO1	P53541	631 aa		3.5	□□□□□ -1.85
AIM4	YBR194W	SVL3	Q03088	825 aa	Known RBP	3.5	□□□□□ -1.85
AIM4	YBR194W	NSE5	Q03718	556 aa		3.5	□□□□□ -1.85
AIM4	YBR194W	RPS9B	P05755	195 aa	Known RBP	3.49	□□□□□ -1.85
AIM4	YBR194W	TPK2	P06245	380 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	RPS21A	P0C0V8	87 aa	Known RBP	3.49	□□□□□ -1.85
AIM4	YBR194W	STE12	P13574	688 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	UGP1	P32861	499 aa	Known RBP	3.49	□□□□□ -1.85
AIM4	YBR194W	ELF1	P36053	145 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	FAT1	P38225	669 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	CRG1	P38892	291 aa	RIP-Chip data	3.49	□□□□□ -1.85	not detected
AIM4	YBR194W	ERP2	P39704	215 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	ACA1	P39970	489 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	PMT6	P42934	759 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	QRI7	P43122	407 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	FDC1	Q03034	503 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	PPN1	Q04119	674 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	HLR1	Q04429	423 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	ARG7	Q04728	441 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	HOF1	Q05080	669 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	COG4	Q06096	861 aa		3.49	□□□□□ -1.85
AIM4	YBR194W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
AIM4	YBR194W	HOM2	P13663	365 aa	Known RBP	3.48	□□□□□ -1.85
AIM4	YBR194W	CDC26	P14724	124 aa		3.48	□□□□□ -1.85
AIM4	YBR194W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
AIM4	YBR194W	HOP1	P20050	605 aa		3.48	□□□□□ -1.85
AIM4	YBR194W	SEC15	P22224	910 aa		3.48	□□□□□ -1.85
AIM4	YBR194W	MF(ALPHA)2	P32435	120 aa		3.48	□□□□□ -1.85
AIM4	YBR194W	PET309	P32522	965 aa	Predicted RBP	3.48	□□□□□ -1.85
AIM4	YBR194W	SER1	P33330	395 aa	Known RBP	3.48	□□□□□ -1.85
AIM4	YBR194W	SDS22	P36047	338 aa		3.48	□□□□□ -1.85
AIM4	YBR194W	SRP68	P38687	599 aa	Known RBP	3.48	□□□□□ -1.85
AIM4	YBR194W	SAW1	P39735	261 aa		3.48	□□□□□ -1.85
AIM4	YBR194W	TMN3	P40071	706 aa		3.48	□□□□□ -1.85
AIM4	YBR194W	FTR1	P40088	404 aa		3.48	□□□□□ -1.85
AIM4	YBR194W	PUS4	P48567	403 aa	Known RBP	3.48	□□□□□ -1.85
AIM4	YBR194W	TAF4	P50105	388 aa		3.48	□□□□□ -1.85
AIM4	YBR194W	CPR8	P53728	308 aa		3.48	□□□□□ -1.85
AIM4	YBR194W	NGL2	Q03264	515 aa	Known RBP	3.48	□□□□□ -1.85
AIM4	YBR194W	SLK19	Q08581	821 aa	Known RBP	3.48	□□□□□ -1.85
AIM4	YBR194W	ADE5,7	P07244	802 aa	Known RBP	3.47	□□□□□ -1.85
AIM4	YBR194W	MSS18	P08593	268 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	TUP1	P16649	713 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	RPA135	P22138	1203 aa	Known RBP	3.47	□□□□□ -1.85
AIM4	YBR194W	MSM1	P22438	575 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	DBF20	P32328	564 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	RPN12	P32496	274 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	ORC2	P32833	620 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	MFT1	P33441	392 aa	Known RBP	3.47	□□□□□ -1.85
AIM4	YBR194W	MRPL7	P36519	292 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	TAF5	P38129	798 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	NOC2	P39744	710 aa	Known RBP	3.47	□□□□□ -1.85
AIM4	YBR194W	SSP120	P39931	234 aa	Known RBP	3.47	□□□□□ -1.85
AIM4	YBR194W	VPS27	P40343	622 aa	Known RBP	3.47	□□□□□ -1.85
AIM4	YBR194W	DAK1	P54838	584 aa	Known RBP	3.47	□□□□□ -1.85
AIM4	YBR194W	ECM38	Q05902	660 aa	Predicted RBP	3.47	□□□□□ -1.85
AIM4	YBR194W	OPY2	Q06810	360 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	BRE1	Q07457	700 aa	Known RBP	3.47	□□□□□ -1.85
AIM4	YBR194W	ULA1	Q12059	462 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	PSF3	Q12146	194 aa		3.47	□□□□□ -1.85
AIM4	YBR194W	MDM20	Q12387	796 aa	Known RBP	3.47	□□□□□ -1.85
AIM4	YBR194W	HSC82	P15108	705 aa	Known RBP	3.46	□□□□□ -1.86
AIM4	YBR194W	EXO84	P38261	753 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	VID27	P40157	782 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	PRM2	P40534	656 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	SNM1	P40993	198 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	IML2	P47031	731 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	ASK10	P48361	1146 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	YDL183C	P48569	320 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	YGR054W	P53235	642 aa	Known RBP	3.46	□□□□□ -1.86
AIM4	YBR194W	YML131W	Q03102	365 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	EFR3	Q03653	782 aa	Known RBP	3.46	□□□□□ -1.86
AIM4	YBR194W	SEG1	Q04279	960 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	YOL114C	Q12322	202 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	RRI2	Q12348	645 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	ARP7	Q12406	477 aa		3.46	□□□□□ -1.86
AIM4	YBR194W	PGK1	P00560	416 aa	Known RBP	3.45	□□□□□ -1.86
AIM4	YBR194W	GLN4	P13188	809 aa	Known RBP	3.45	□□□□□ -1.86
AIM4	YBR194W	PMA2	P19657	947 aa		3.45	□□□□□ -1.86
AIM4	YBR194W	MBR1	P23493	339 aa		3.45	□□□□□ -1.86
AIM4	YBR194W	PHO3	P24031	467 aa		3.45	□□□□□ -1.86
AIM4	YBR194W	MSH1	P25846	959 aa		3.45	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms