RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	GYG1	P46976	350 aa		13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	C10orf71	Q711Q0	1435 aa		13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	CDC37L1	Q7L3B6	337 aa		13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	CHST3	Q7LGC8	479 aa		13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	C2CD5	Q86YS7	1000 aa		13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	AIDA	Q96BJ3	306 aa		13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	CHMP4C	Q96CF2	233 aa		13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	FAM84B	Q96KN1	310 aa	Predicted RBP	13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	ANKRD2	Q9GZV1	360 aa		13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	GPHN	Q9NQX3	736 aa	Predicted RBP	13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	PIM2	Q9P1W9	311 aa		13.26	□□□□□ -0.29
GFAP-238	ENST00000640859	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	COL1A1	P02452	1464 aa	Predicted RBP	13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	ALDH1B1	P30837	517 aa		13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	DNM1	Q05193	864 aa	Known RBP	13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	GPR162	Q16538	588 aa		13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	CSPP1	Q1MSJ5	1256 aa		13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	TBC1D10C	Q8IV04	446 aa		13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	IFNL3	Q8IZI9	196 aa		13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	CCDC24	Q8N4L8	307 aa		13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	CNKSR1	Q969H4	720 aa		13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	CHD4	Q14839	1912 aa		13.25	□□□□□ -0.29
GFAP-238	ENST00000640859	SALL1	Q9NSC2	1324 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	GSG1L2	A8MUP6	293 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	SEMA3E	O15041	775 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	APP	P05067	770 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	NPR1	P16066	1061 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	GNAT2	P19087	354 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	UBE2H	P62256	183 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	CCT2	P78371	535 aa	Known RBP	13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	HMGN5	P82970	282 aa	Known RBP	13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	REST	Q13127	1097 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	CAVIN4	Q5BKX8	364 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	RALYL	Q86SE5	291 aa	Known RBP	13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	MASTL	Q96GX5	879 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	RBM17	Q96I25	401 aa	Known RBP	13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	ARMT1	Q9H993	441 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	LRP2BP	Q9P2M1	347 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	DENND2A	Q9ULE3	1009 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	TIAM2	Q8IVF5	1701 aa		13.24	□□□□□ -0.29
GFAP-238	ENST00000640859	CACNA1S	Q13698	1873 aa		13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	PDS5A	Q29RF7	1337 aa	Known RBP	13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	IRS2	Q9Y4H2	1338 aa		13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	PTPDC1	A2A3K4	754 aa		13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	CYP7A1	P22680	504 aa		13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	DALRD3	Q5D0E6	543 aa	Known RBP	13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	CYB5R4	Q7L1T6	521 aa		13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	LCORL	Q8N3X6	602 aa		13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	NKX2-3	Q8TAU0	364 aa		13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	DDX11	Q96FC9	970 aa		13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	PANK2	Q9BZ23	570 aa		13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	HPS5	Q9UPZ3	1129 aa		13.23	□□□□□ -0.29
GFAP-238	ENST00000640859	MYH13	Q9UKX3	1938 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	FIBP	O43427	364 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	PRKAB2	O43741	272 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	GRIN3B	O60391	1043 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	DPEP1	P16444	411 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	KRT85	P78386	507 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	TRDN	Q13061	729 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	SOGA3	Q5TF21	947 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	STYK1	Q6J9G0	422 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	NAA16	Q6N069	864 aa	Predicted RBP	13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	LRSAM1	Q6UWE0	723 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	FERMT3	Q86UX7	667 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	TTLL6	Q8N841	843 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	FAM184A	Q8NB25	1140 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	SYAP1	Q96A49	352 aa	Predicted RBP	13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	NCOA5	Q9HCD5	579 aa	Known RBP	13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	BCS1L	Q9Y276	419 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	TACC3	Q9Y6A5	838 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	SLC4A4	Q9Y6R1	1079 aa		13.22	□□□□□ -0.29
GFAP-238	ENST00000640859	MYH15	Q9Y2K3	1946 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	ELP1	O95163	1332 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	KLF18	A0A0U1RQI7	1052 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	SH2B2	O14492	632 aa	Predicted RBP	13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	SRGN	P10124	158 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	KLRK1	P26718	216 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	GRAP	Q13588	217 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	TTC6	Q86TZ1	520 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	NLGN2	Q8NFZ4	835 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	GRAPL	Q8TC17	118 aa	Predicted RBP	13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	NACAP1	Q9BZK3	213 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	NAPB	Q9H115	298 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	RAI14	Q9P0K7	980 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	KIF3A	Q9Y496	699 aa		13.21	□□□□□ -0.29
GFAP-238	ENST00000640859	NEDD4	P46934	1319 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859		B4E1Z4	1266 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859		H3BQV1	296 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	FDPS	P14324	419 aa	Known RBP	13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	CHRNA5	P30532	468 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	HIBADH	P31937	336 aa	Known RBP	13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	CTDSPL2	Q05D32	466 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	AKNAD1	Q5T1N1	836 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	IFFO2	Q5TF58	517 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	FAM173B	Q6P4H8	233 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	ADGRA1	Q86SQ6	560 aa		13.2	□□□□□ -0.3
GFAP-238	ENST00000640859	VPS37D	Q86XT2	251 aa		13.2	□□□□□ -0.3

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