RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 RCOR1Q9UKL0 485 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 CFAP45Q9UL16 551 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 CACNA1SQ13698 1873 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 CCDC88AQ3V6T2 1871 aa6.53□□□□□ -1.36
NEK3-211ENST00000629912 MYH13Q9UKX3 1938 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 PRKAB2O43741 272 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 TRIM37O94972 964 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 ATP2B4P23634 1241 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 ADD1P35611 737 aaKnown RBP6.52□□□□□ -1.37
NEK3-211ENST00000629912 NT5C2P49902 561 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 RCAN1P53805 252 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 ST5P78524 1137 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 TXNRD1Q16881 649 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 FOXD4L6Q3SYB3 417 aaPredicted RBP6.52□□□□□ -1.37
NEK3-211ENST00000629912 CCDC183Q5T5S1 534 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 ZNF772Q68DY9 489 aaPredicted RBP6.52□□□□□ -1.37
NEK3-211ENST00000629912 FOXD4L3Q6VB84 417 aaPredicted RBP6.52□□□□□ -1.37
NEK3-211ENST00000629912 TMC4Q7Z404 712 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 TTC6Q86TZ1 520 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 CNBD1Q8NA66 436 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 TDRD7Q8NHU6 1098 aaKnown RBP6.52□□□□□ -1.37
NEK3-211ENST00000629912 WDR66Q8TBY9 1149 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 NSUN4Q96CB9 384 aaKnown RBP6.52□□□□□ -1.37
NEK3-211ENST00000629912 DDX11Q96FC9 970 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 RBM17Q96I25 401 aaKnown RBP6.52□□□□□ -1.37
NEK3-211ENST00000629912 CRAMP1Q96RY5 1269 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 PPP1R9BQ96SB3 815 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 LY9Q9HBG7 655 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 ABCF2Q9UG63 623 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 TACC3Q9Y6A5 838 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 MYH15Q9Y2K3 1946 aa6.52□□□□□ -1.37
NEK3-211ENST00000629912 XDHP47989 1333 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 TIAM2Q8IVF5 1701 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 KIAA1551Q9HCM1 1747 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 B4E1Z4 1266 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 FIBPO43427 364 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 DTNBO60941 627 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 CDKL5O76039 1030 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 TDO2P48775 406 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 PPP4CP60510 307 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 MECOMQ03112 1051 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 CTDSPL2Q05D32 466 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 PPARAQ07869 468 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 PPP2R5BQ15173 497 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 UVSSAQ2YD98 709 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 SBK1Q52WX2 424 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 TMEM67Q5HYA8 995 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 CPLX2Q6PUV4 134 aaKnown RBP6.51□□□□□ -1.37
NEK3-211ENST00000629912 APOA5Q6Q788 366 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 ADGRA1Q86SQ6 560 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 FERMT3Q86UX7 667 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 NLGN1Q8N2Q7 840 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 CCDC24Q8N4L8 307 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 FLAD1Q8NFF5 587 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 FBXO18Q8NFZ0 1043 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 NKX2-3Q8TAU0 364 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 ZNF384Q8TF68 577 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 LEO1Q8WVC0 666 aaPredicted RBP6.51□□□□□ -1.37
NEK3-211ENST00000629912 SPATA32Q96LK8 384 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 ZNF396Q96N95 335 aaPredicted RBP6.51□□□□□ -1.37
NEK3-211ENST00000629912 RBSNQ9H1K0 784 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 NCOA5Q9HCD5 579 aaKnown RBP6.51□□□□□ -1.37
NEK3-211ENST00000629912 ATP8A2Q9NTI2 1148 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 PODXL2Q9NZ53 605 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 TFCP2L1Q9NZI6 479 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 TFIP11Q9UBB9 837 aaKnown RBP6.51□□□□□ -1.37
NEK3-211ENST00000629912 ORC3Q9UBD5 711 aaPredicted RBP6.51□□□□□ -1.37
NEK3-211ENST00000629912 IQSEC3Q9UPP2 1182 aaPredicted RBP6.51□□□□□ -1.37
NEK3-211ENST00000629912 NID2Q14112 1375 aa6.51□□□□□ -1.37
NEK3-211ENST00000629912 COL1A1P02452 1464 aaPredicted RBP6.51□□□□□ -1.37
NEK3-211ENST00000629912 NEDD4P46934 1319 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 TNRC6CQ9HCJ0 1690 aaKnown RBP6.5□□□□□ -1.37
NEK3-211ENST00000629912 SYCE3A1L190 88 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 GOLGA8BA8MQT2 603 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 POLRMTO00411 1230 aaKnown RBP6.5□□□□□ -1.37
NEK3-211ENST00000629912 CPLX1O14810 134 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 IFIT3O14879 490 aaKnown RBP6.5□□□□□ -1.37
NEK3-211ENST00000629912 NPHP1O15259 732 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 ZBTB43O43298 467 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 ORC4O43929 436 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 KDM4AO75164 1064 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 LDHCP07864 332 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 KLRK1P26718 216 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 NASPP49321 788 aaPredicted RBP6.5□□□□□ -1.37
NEK3-211ENST00000629912 METAP2P50579 478 aaKnown RBP eCLIP6.5□□□□□ -1.37
NEK3-211ENST00000629912 DYNLL1P63167 89 aaKnown RBP6.5□□□□□ -1.37
NEK3-211ENST00000629912 GSTO1P78417 241 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 CCDC173Q0VFZ6 552 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 SART3Q15020 963 aaKnown RBP6.5□□□□□ -1.37
NEK3-211ENST00000629912 NTRK3Q16288 839 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 FAM173BQ6P4H8 233 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 SYNE3Q6ZMZ3 975 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 BRAPQ7Z569 592 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 TXNRD3Q86VQ6 643 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 CERS3Q8IU89 383 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 SP8Q8IXZ3 490 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 MIGA1Q8NAN2 632 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 RPGRQ92834 1020 aaKnown RBP6.5□□□□□ -1.37
NEK3-211ENST00000629912 AKT1S1Q96B36 256 aa6.5□□□□□ -1.37
NEK3-211ENST00000629912 PANK2Q9BZ23 570 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms