RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CHRNDQ07001 517 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 UBE4AQ14139 1066 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 NOLC1Q14978 699 aaKnown RBP eCLIP12.14□□□□□ -0.479e-10■■■■□ 20.6
PABPC1-224ENST00000610907 SARM1Q6SZW1 724 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 PLA2G4DQ86XP0 818 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 STAG1Q8WVM7 1258 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
PABPC1-224ENST00000610907 GOLPH3LQ9H4A5 285 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 LY9Q9HBG7 655 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 SPTLC3Q9NUV7 552 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 TIAM2Q8IVF5 1701 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 MYO5AQ9Y4I1 1855 aaKnown RBP12.14□□□□□ -0.47
PABPC1-224ENST00000610907 ZNF804BA4D1E1 1349 aa12.14□□□□□ -0.47
PABPC1-224ENST00000610907 MYH14Q7Z406 1995 aaKnown RBP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 B4E1Z4 1266 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 GOLGA6L19H0YKK7 550 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 TOM1O60784 492 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 IARSP41252 1262 aaKnown RBP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 SART3Q15020 963 aaKnown RBP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 TMEM67Q5HYA8 995 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 ANO1Q5XXA6 986 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 TMED8Q6PL24 325 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 JMYQ8N9B5 988 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 ALG1Q9BT22 464 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 FTOQ9C0B1 505 aaKnown RBP eCLIP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 DNAJC25Q9H1X3 360 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 EPB41L4AQ9HCS5 686 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 BSDC1Q9NW68 430 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 COL5A3P25940 1745 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 IFIT3O14879 490 aaKnown RBP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 ZBTB22O15209 634 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 CMA1P23946 247 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 BCAMP50895 628 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 ZNF75DP51815 510 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 TRIM29Q14134 588 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 SLC39A14Q15043 492 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 IQCB1Q15051 598 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 NTRK3Q16288 839 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 NFXL1Q6ZNB6 911 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 ANKRD18AQ8IVF6 992 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 TTC12Q9H892 705 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 ARMT1Q9H993 441 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 ZSWIM5Q9P217 1185 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 LRP2BPQ9P2M1 347 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 R3HCC1Q9Y3T6 440 aaKnown RBP12.13□□□□□ -0.47
PABPC1-224ENST00000610907 SLC12A7Q9Y666 1083 aa12.13□□□□□ -0.47
PABPC1-224ENST00000610907 BCORQ6W2J9 1755 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 NEDD4P46934 1319 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 CNTNAP4Q9C0A0 1308 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 CCDC69A6NI79 296 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 FAM177BA6PVY3 158 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 GOLGA8AA7E2F4 631 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 SEMA3EO15041 775 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 IGSF3O75054 1194 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 PPP6R2O75170 966 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-224ENST00000610907 IFNAR1P17181 557 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 U2AF2P26368 475 aaKnown RBP eCLIP12.12□□□□□ -0.471e-22■□□□□ 11.3
PABPC1-224ENST00000610907 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
PABPC1-224ENST00000610907 KIAA1524Q8TCG1 905 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 TIGD1Q96MW7 591 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 SDF4Q9BRK5 362 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 TRIM5Q9C035 493 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 ANAPC4Q9UJX5 808 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 CLIC4Q9Y696 253 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 SLC4A4Q9Y6R1 1079 aa12.12□□□□□ -0.47
PABPC1-224ENST00000610907 BCL9LQ86UU0 1499 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 A0A0G2JS52 829 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 ERICH2A1L162 156 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 FMNL1O95466 1100 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-224ENST00000610907 PCP11498 1178 aaKnown RBP12.11□□□□□ -0.47
PABPC1-224ENST00000610907 TDO2P48775 406 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 RBM6P78332 1123 aaKnown RBP12.11□□□□□ -0.47
PABPC1-224ENST00000610907 SSRP1Q08945 709 aaKnown RBP12.11□□□□□ -0.47
PABPC1-224ENST00000610907 CAVIN4Q5BKX8 364 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 KRT40Q6A162 431 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 OTUD7BQ6GQQ9 843 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 CEP57L1Q8IYX8 460 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 MRFAP1L1Q96HT8 127 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 PRIMPOLQ96LW4 560 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 ZNF830Q96NB3 372 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-224ENST00000610907 BPIFA3Q9BQP9 254 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 NYXQ9GZU5 481 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
PABPC1-224ENST00000610907 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
PABPC1-224ENST00000610907 FAM237AA0A1B0GTK4 181 aa12.1□□□□□ -0.47
PABPC1-224ENST00000610907 BECN2A8MW95 431 aa12.1□□□□□ -0.47
PABPC1-224ENST00000610907 CDC27P30260 824 aa12.1□□□□□ -0.47
PABPC1-224ENST00000610907 ZRSR1Q15695 479 aaKnown RBP12.1□□□□□ -0.47
PABPC1-224ENST00000610907 VPS37DQ86XT2 251 aa12.1□□□□□ -0.47
PABPC1-224ENST00000610907 LCORLQ8N3X6 602 aa12.1□□□□□ -0.47
PABPC1-224ENST00000610907 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.1□□□□□ -0.47
PABPC1-224ENST00000610907 FAM217BQ9NTX9 383 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-224ENST00000610907 KIAA1468Q9P260 1216 aa12.1□□□□□ -0.47
PABPC1-224ENST00000610907 CHD4Q14839 1912 aa12.1□□□□□ -0.47
PABPC1-224ENST00000610907 MAGEB6P1A0A0J9YX57 407 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms