RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 IRX5P78411 483 aaPredicted RBP8.15□□□□□ -1.1
CDC40-207ENST00000606893 CCDC173Q0VFZ6 552 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 ME3Q16798 604 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 RABL6Q3YEC7 729 aaPredicted RBP8.15□□□□□ -1.1
CDC40-207ENST00000606893 GPIHBP1Q8IV16 184 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 NRBP1Q9UHY1 535 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 FBXO3Q9UK99 471 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 RIPOR2Q9Y4F9 1068 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 CYP46A1Q9Y6A2 500 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 TTC41PQ6P2S7 1318 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 CDHR2Q9BYE9 1310 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 LETM1O95202 739 aaPredicted RBP8.15□□□□□ -1.1
CDC40-207ENST00000606893 CHRM1P11229 460 aaPredicted RBP8.15□□□□□ -1.1
CDC40-207ENST00000606893 LIG1P18858 919 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 ALDH1B1P30837 517 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 HIBADHP31937 336 aaKnown RBP8.15□□□□□ -1.1
CDC40-207ENST00000606893 EAPPQ56P03 285 aaPredicted RBP8.15□□□□□ -1.1
CDC40-207ENST00000606893 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
CDC40-207ENST00000606893 CLRN2A0PK11 232 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 CSF1RP07333 972 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 VPS53Q5VIR6 699 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 JDP2Q8WYK2 163 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 EVI5LQ96CN4 794 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 TBC1D16Q8TBP0 767 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 DNAJC25Q9H1X3 360 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 VEZTQ9HBM0 779 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 DACT1Q9NYF0 836 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 CIZ1Q9ULV3 898 aaPredicted RBP8.14□□□□□ -1.11
CDC40-207ENST00000606893 FAM170AA1A519 330 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 APOBRQ0VD83 1088 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 RASGRF1Q13972 1273 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 ARID5BQ14865 1188 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 ZSCAN29Q8IWY8 852 aaPredicted RBP8.14□□□□□ -1.11
CDC40-207ENST00000606893 PLA2G12BQ9BX93 195 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 GTPBP4Q9BZE4 634 aaKnown RBP8.14□□□□□ -1.11
CDC40-207ENST00000606893 INCENPQ9NQS7 918 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 CLEC11AQ9Y240 323 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 NHSQ6T4R5 1651 aa8.14□□□□□ -1.11
CDC40-207ENST00000606893 DDNO94850 711 aaPredicted RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 MYCNP04198 464 aaPredicted RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 MCAMP43121 646 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 PUM3Q15397 648 aaKnown RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 MFSD14BQ5SR56 506 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 SLC9C2Q5TAH2 1124 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 BLOC1S2Q6QNY1 142 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 CMTR1Q8N1G2 835 aaKnown RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDC40-207ENST00000606893 RNF216Q9NWF9 866 aaPredicted RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 TPCN1Q9ULQ1 816 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 DYNC1I1O14576 645 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 CIAO1O76071 339 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 PTGS1P23219 599 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 SF3B3Q15393 1217 aaKnown RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 TBC1D10BQ4KMP7 808 aaPredicted RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 SPECC1Q5M775 1068 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 LRSAM1Q6UWE0 723 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 MAGEB6Q8N7X4 407 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 SLC16A10Q8TF71 515 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 FAM84BQ96KN1 310 aaPredicted RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 MYL10Q9BUA6 226 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 SAP30BPQ9UHR5 308 aaKnown RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 NUP98P52948 1817 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 hCG_1642624A0A1W2PR95 340 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 SMIM22K7EJ46 135 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 KCNA3P22001 575 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 SF3A1Q15459 793 aaKnown RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 ZRSR1Q15695 479 aaKnown RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 MTERF4Q7Z6M4 381 aaKnown RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 DZIP1Q86YF9 867 aaKnown RBP8.13□□□□□ -1.11
CDC40-207ENST00000606893 TRERF1Q96PN7 1200 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 TAOK3Q9H2K8 898 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 AATFQ9NY61 560 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDC40-207ENST00000606893 LIMCH1Q9UPQ0 1083 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 TJP1Q07157 1748 aa8.13□□□□□ -1.11
CDC40-207ENST00000606893 MROH5Q6ZUA9 1318 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 FAM196BA6NMK8 535 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 GNL2Q13823 731 aaKnown RBP8.12□□□□□ -1.11
CDC40-207ENST00000606893 ZNF771Q7L3S4 317 aaPredicted RBP8.12□□□□□ -1.11
CDC40-207ENST00000606893 SAMD7Q7Z3H4 446 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 SPATA32Q96LK8 384 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 SIPA1L3O60292 1781 aaPredicted RBP8.12□□□□□ -1.11
CDC40-207ENST00000606893 CICQ96RK0 1608 aaPredicted RBP8.12□□□□□ -1.11
CDC40-207ENST00000606893 MINDY4BA8MYZ0 360 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 SGSM2O43147 1006 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 UQCRFS1P1P0C7P4 283 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 ME1P48163 572 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 SKIDA1Q1XH10 827 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 LPIN2Q92539 896 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 ANKRD2Q9GZV1 360 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 WNK3Q9BYP7 1800 aa8.12□□□□□ -1.11
CDC40-207ENST00000606893 COBLO75128 1261 aa8.11□□□□□ -1.11
CDC40-207ENST00000606893 BBOX1O75936 387 aa8.11□□□□□ -1.11
CDC40-207ENST00000606893 ZSCAN22P10073 491 aaPredicted RBP8.11□□□□□ -1.11
CDC40-207ENST00000606893 DYNLL1P63167 89 aaKnown RBP8.11□□□□□ -1.11
CDC40-207ENST00000606893 GOLGA8FQ08AF8 430 aa8.11□□□□□ -1.11
CDC40-207ENST00000606893 GOLGA8DPQ0D2H9 430 aa8.11□□□□□ -1.11
CDC40-207ENST00000606893 CREB3L3Q68CJ9 461 aa8.11□□□□□ -1.11
CDC40-207ENST00000606893 ZSCAN25Q6NSZ9 544 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms