RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 ALDH1L2Q3SY69 923 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 SOGA3Q5TF21 947 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 DCLK2Q8N568 766 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 SH3TC2Q8TF17 1288 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 ZNF408Q9H9D4 720 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 SCHIP1Q9P0W5 487 aaPredicted RBP8.21□□□□□ -1.1
TUBE1-207ENST00000604689 DRC7Q8IY82 874 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 MGARPQ8TDB4 240 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 DNAAF4Q8WXU2 420 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 USP6NLQ92738 828 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 RBSNQ9H1K0 784 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 OGFRQ9NZT2 677 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 TBC1D7Q9P0N9 293 aa8.21□□□□□ -1.1
TUBE1-207ENST00000604689 ABCC1P33527 1531 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 MIA2Q96PC5 1412 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 A0A1B0GUL7 405 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 CDC45O75419 566 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 TGFB3P10600 412 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 CNGA1P29973 690 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 MNAT1P51948 309 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 NR1H3Q13133 447 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 IFT122Q9HBG6 1241 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 EXOC1Q9NV70 894 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 C6orf203Q9P0P8 240 aaPredicted RBP8.2□□□□□ -1.1
TUBE1-207ENST00000604689 NOL7Q9UMY1 257 aaKnown RBP8.2□□□□□ -1.1
TUBE1-207ENST00000604689 SFI1A8K8P3 1242 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 MAGEA8P43361 318 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 EN1Q05925 392 aaPredicted RBP8.2□□□□□ -1.1
TUBE1-207ENST00000604689 CCDC173Q0VFZ6 552 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 SASS6Q6UVJ0 657 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 STAG2Q8N3U4 1231 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 HINFPQ9BQA5 517 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 CYLDQ9NQC7 956 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 CCDC87Q9NVE4 849 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 NLRP2Q9NX02 1062 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 CFAP45Q9UL16 551 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 PARD3Q8TEW0 1356 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 TULP2O00295 520 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 ZNF189O75820 626 aaPredicted RBP8.2□□□□□ -1.1
TUBE1-207ENST00000604689 GABPB1Q06547 395 aaPredicted RBP8.2□□□□□ -1.1
TUBE1-207ENST00000604689 TRDNQ13061 729 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 GABPB2Q8TAK5 448 aaPredicted RBP8.2□□□□□ -1.1
TUBE1-207ENST00000604689 HELQQ8TDG4 1101 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 GMLQ99445 158 aa8.2□□□□□ -1.1
TUBE1-207ENST00000604689 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.2□□□□□ -1.1
TUBE1-207ENST00000604689 PABPN1LA6NDY0 278 aaKnown RBP8.19□□□□□ -1.1
TUBE1-207ENST00000604689 TRAPPC10P48553 1259 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 RWDD2BP57060 319 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 PKP1Q13835 747 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 HSP90B2PQ58FF3 399 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 CCDC178Q5BJE1 867 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 MCTP1Q6DN14 999 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 NDUFAF2Q8N183 169 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 RUFY1Q96T51 708 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 SH3GL3Q99963 347 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 TAOK3Q9H2K8 898 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 ZBTB3Q9H5J0 574 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 TBK1Q9UHD2 729 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 RRP15Q9Y3B9 282 aaKnown RBP8.19□□□□□ -1.1
TUBE1-207ENST00000604689 PCDHB9Q9Y5E1 797 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 SMTNL1A8MU46 457 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 PRPHP41219 470 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 SEPT14Q6ZU15 432 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 MAPK8IP3Q9UPT6 1336 aa8.19□□□□□ -1.1
TUBE1-207ENST00000604689 ROCK2O75116 1388 aaKnown RBP8.19□□□□□ -1.1
TUBE1-207ENST00000604689 TPPPO94811 219 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 BPNT1O95861 308 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 MMEP08473 750 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 CD46P15529 392 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 TRIM21P19474 475 aaKnown RBP8.18□□□□□ -1.1
TUBE1-207ENST00000604689 BIRC3Q13489 604 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 CENPTQ96BT3 561 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 TMEM106CQ9BVX2 250 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 PDGFDQ9GZP0 370 aaPredicted RBP8.18□□□□□ -1.1
TUBE1-207ENST00000604689 MUC3BQ9H195 1237 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 HOMER2Q9NSB8 354 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 GGT7Q9UJ14 662 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 BLOC1S6Q9UL45 172 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 SHANK2Q9UPX8 1470 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 PLB1Q6P1J6 1458 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 MZF1P28698 734 aaPredicted RBP8.18□□□□□ -1.1
TUBE1-207ENST00000604689 FKBP4Q02790 459 aaKnown RBP eCLIP8.18□□□□□ -1.1
TUBE1-207ENST00000604689 RELL1Q8IUW5 271 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 TPCN2Q8NHX9 752 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 ERP27Q96DN0 273 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 DAAM1Q9Y4D1 1078 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 LZTS3O60299 673 aaPredicted RBP8.18□□□□□ -1.1
TUBE1-207ENST00000604689 SCGB1D2O95969 90 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 FDX1P10109 184 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 ATF3P18847 181 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 MPSTP25325 297 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 DDB1Q16531 1140 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 CDC37Q16543 378 aaPredicted RBP8.18□□□□□ -1.1
TUBE1-207ENST00000604689 SNX21Q969T3 373 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 SNTG2Q9NY99 539 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 SYNRGQ9UMZ2 1314 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 ZNF518AQ6AHZ1 1483 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 LMTK3Q96Q04 1460 aa8.18□□□□□ -1.1
TUBE1-207ENST00000604689 KIAA0754O94854 1291 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 SPECC1Q5M775 1068 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms