RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 LRRC24Q50LG9 513 aa17.55■□□□□ 0.4
LYSMD4-211ENST00000604213 TOGARAM2Q6ZUX3 1019 aa17.55■□□□□ 0.4
LYSMD4-211ENST00000604213 PLBD2Q8NHP8 589 aa17.55■□□□□ 0.4
LYSMD4-211ENST00000604213 RBM33Q96EV2 1170 aaKnown RBP17.55■□□□□ 0.4
LYSMD4-211ENST00000604213 AIFM3Q96NN9 605 aa17.55■□□□□ 0.4
LYSMD4-211ENST00000604213 MAP3K14Q99558 947 aa17.55■□□□□ 0.4
LYSMD4-211ENST00000604213 PARD6BQ9BYG5 372 aa17.55■□□□□ 0.4
LYSMD4-211ENST00000604213 VPS37DQ86XT2 251 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 JMYQ8N9B5 988 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 RABGGTAQ92696 567 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 FUT8Q9BYC5 575 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 ARFGAP3Q9NP61 516 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 SPEF2Q9C093 1822 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 A0A1B0GUL7 405 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 EYA2O00167 538 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 STX10O60499 249 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 BMP6P22004 513 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 CDC27P30260 824 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 LONRF3Q496Y0 759 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 TC2NQ8N9U0 490 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 NCOA7Q8NI08 942 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 CCDC34Q96HJ3 373 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 CLIC6Q96NY7 704 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 SCN11AQ9UI33 1791 aa17.54■□□□□ 0.4
LYSMD4-211ENST00000604213 VGLL3A8MV65 326 aa17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 PHKG2P15735 406 aa17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 ALG1Q9BT22 464 aa17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 TSPYL1Q9H0U9 437 aa17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 PCDHA5Q9Y5H7 936 aa17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 WDR19Q8NEZ3 1342 aa17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 GNL2Q13823 731 aaKnown RBP17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 KRBA2Q6ZNG9 492 aa17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 FEZ2Q9UHY8 353 aaPredicted RBP17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 CPDO75976 1380 aa17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 C4AP0C0L4 1744 aa17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 C4BP0C0L5 1744 aa17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 DDX60Q8IY21 1712 aaKnown RBP17.53■□□□□ 0.4
LYSMD4-211ENST00000604213 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.4
LYSMD4-211ENST00000604213 GPS2Q13227 327 aa17.52■□□□□ 0.4
LYSMD4-211ENST00000604213 WASHC4Q2M389 1173 aa17.52■□□□□ 0.4
LYSMD4-211ENST00000604213 CCDC102BQ68D86 513 aa17.52■□□□□ 0.4
LYSMD4-211ENST00000604213 KRT40Q6A162 431 aa17.52■□□□□ 0.4
LYSMD4-211ENST00000604213 ZNF594Q96JF6 807 aaPredicted RBP17.52■□□□□ 0.4
LYSMD4-211ENST00000604213 ZMYM6O95789 1325 aa17.52■□□□□ 0.39
LYSMD4-211ENST00000604213 CUTAO60888 179 aa17.52■□□□□ 0.39
LYSMD4-211ENST00000604213 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.39
LYSMD4-211ENST00000604213 RALYLQ86SE5 291 aaKnown RBP17.52■□□□□ 0.39
LYSMD4-211ENST00000604213 PDILTQ8N807 584 aa17.52■□□□□ 0.39
LYSMD4-211ENST00000604213 DHX58Q96C10 678 aa17.52■□□□□ 0.39
LYSMD4-211ENST00000604213 KCNH3Q9ULD8 1083 aa17.52■□□□□ 0.39
LYSMD4-211ENST00000604213 ADKP55263 362 aaKnown RBP17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 CNNM3Q8NE01 707 aa17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 RAPGEF4Q8WZA2 1011 aa17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 GOLGA1Q92805 767 aa17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 FOXN1O15353 648 aa17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 CIAO1O76071 339 aa17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 ZFYP08048 801 aaPredicted RBP17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 ZNF18P17022 549 aa17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 HSP90AA4PQ58FG1 418 aa17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 SPECC1LQ69YQ0 1117 aa17.51■□□□□ 0.39
LYSMD4-211ENST00000604213 TXLNAP40222 546 aa17.5■□□□□ 0.39
LYSMD4-211ENST00000604213 PUS3Q9BZE2 481 aaKnown RBP17.5■□□□□ 0.39
LYSMD4-211ENST00000604213 ZNF213O14771 459 aa17.5■□□□□ 0.39
LYSMD4-211ENST00000604213 LONRF2Q1L5Z9 754 aa17.5■□□□□ 0.39
LYSMD4-211ENST00000604213 JAKMIP3Q5VZ66 844 aa17.5■□□□□ 0.39
LYSMD4-211ENST00000604213 ELOA2Q8IYF1 753 aaPredicted RBP17.5■□□□□ 0.39
LYSMD4-211ENST00000604213 PUS7LQ9H0K6 701 aaKnown RBP17.5■□□□□ 0.39
LYSMD4-211ENST00000604213 MAN1B1Q9UKM7 699 aa17.5■□□□□ 0.39
LYSMD4-211ENST00000604213 FMR1Q06787 632 aaKnown RBP eCLIP17.49■□□□□ 0.39
LYSMD4-211ENST00000604213 ZSCAN26Q16670 478 aa17.49■□□□□ 0.39
LYSMD4-211ENST00000604213 HSP90AB3PQ58FF7 597 aa17.49■□□□□ 0.39
LYSMD4-211ENST00000604213 APPBP2Q92624 585 aa17.49■□□□□ 0.39
LYSMD4-211ENST00000604213 DESI2Q9BSY9 194 aa17.49■□□□□ 0.39
LYSMD4-211ENST00000604213 NBPF3Q9H094 633 aa17.49■□□□□ 0.39
LYSMD4-211ENST00000604213 CWC25Q9NXE8 425 aaPredicted RBP17.49■□□□□ 0.39
LYSMD4-211ENST00000604213 PSD3Q9NYI0 1048 aa17.49■□□□□ 0.39
LYSMD4-211ENST00000604213 CCDC151A5D8V7 595 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 H3BQF6 201 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 MAP2K7O14733 419 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 ADORA1P30542 326 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 METAP2P50579 478 aaKnown RBP eCLIP17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 GYS2P54840 703 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 KARSQ15046 597 aaKnown RBP17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 LMOD2Q6P5Q4 547 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 NKX2-3Q8TAU0 364 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 EXOC4Q96A65 974 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 MRPL44Q9H9J2 332 aaKnown RBP17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 NFE2L3Q9Y4A8 694 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 CDKL5O76039 1030 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 BRD3Q15059 726 aa17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 ANGEL1Q9UNK9 670 aaKnown RBP17.48■□□□□ 0.39
LYSMD4-211ENST00000604213 TTC39AQ5SRH9 613 aa17.47■□□□□ 0.39
LYSMD4-211ENST00000604213 ENOX1Q8TC92 643 aaKnown RBP17.47■□□□□ 0.39
LYSMD4-211ENST00000604213 CCDC12Q8WUD4 166 aaPredicted RBP17.47■□□□□ 0.39
LYSMD4-211ENST00000604213 PHKBQ93100 1093 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms