RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 CCDC136Q96JN2 1154 aa16.84■□□□□ 0.29
RNF40-212ENST00000602784 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.84■□□□□ 0.29
RNF40-212ENST00000602784 TMOD2Q9NZR1 351 aa16.84■□□□□ 0.29
RNF40-212ENST00000602784 ADM5C9JUS6 153 aa16.83■□□□□ 0.28
RNF40-212ENST00000602784 PPP4CP60510 307 aa16.83■□□□□ 0.28
RNF40-212ENST00000602784 SLC9C2Q5TAH2 1124 aa16.83■□□□□ 0.28
RNF40-212ENST00000602784 MAST2Q6P0Q8 1798 aa16.83■□□□□ 0.28
RNF40-212ENST00000602784 CERS3Q8IU89 383 aa16.83■□□□□ 0.28
RNF40-212ENST00000602784 EDC3Q96F86 508 aaKnown RBP16.83■□□□□ 0.28
RNF40-212ENST00000602784 DEFB129Q9H1M3 183 aa16.83■□□□□ 0.28
RNF40-212ENST00000602784 USP40Q9NVE5 1235 aa16.83■□□□□ 0.28
RNF40-212ENST00000602784 MYO5AQ9Y4I1 1855 aaKnown RBP16.83■□□□□ 0.28
RNF40-212ENST00000602784 TRAF5O00463 557 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 BAG3O95817 575 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 PDE6AP16499 860 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 PLCG2P16885 1265 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 CYP7A1P22680 504 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 BTDP43251 543 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 TNNI2P48788 182 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 APLP1P51693 650 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 ZSCAN25Q6NSZ9 544 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 FAM83AQ86UY5 434 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 TICAM2Q86XR7 235 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 MAGEB6Q8N7X4 407 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 KBTBD3Q8NAB2 608 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 NOL10Q9BSC4 688 aaKnown RBP16.82■□□□□ 0.28
RNF40-212ENST00000602784 VEZTQ9HBM0 779 aa16.82■□□□□ 0.28
RNF40-212ENST00000602784 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
RNF40-212ENST00000602784 HSPA6P17066 643 aa16.81■□□□□ 0.28
RNF40-212ENST00000602784 RHBDL3P58872 404 aa16.81■□□□□ 0.28
RNF40-212ENST00000602784 LRRFIP1Q32MZ4 808 aaKnown RBP16.81■□□□□ 0.28
RNF40-212ENST00000602784 IDI2Q9BXS1 227 aa16.81■□□□□ 0.28
RNF40-212ENST00000602784 PPP4R2Q9NY27 417 aa16.81■□□□□ 0.28
RNF40-212ENST00000602784 TCRBV5S4A2TA0A5A2 114 aa16.8■□□□□ 0.28
RNF40-212ENST00000602784 PDE4AP27815 886 aa16.8■□□□□ 0.28
RNF40-212ENST00000602784 RASA3Q14644 834 aa16.8■□□□□ 0.28
RNF40-212ENST00000602784 UBE3CQ15386 1083 aa16.8■□□□□ 0.28
RNF40-212ENST00000602784 CST9Q5W186 159 aa16.8■□□□□ 0.28
RNF40-212ENST00000602784 ADGRA1Q86SQ6 560 aa16.8■□□□□ 0.28
RNF40-212ENST00000602784 CDCA5Q96FF9 252 aa16.8■□□□□ 0.28
RNF40-212ENST00000602784 ZNF532Q9HCE3 1301 aa16.79■□□□□ 0.28
RNF40-212ENST00000602784 TMEM88BA6NKF7 163 aa16.79■□□□□ 0.28
RNF40-212ENST00000602784 TCP10L2B9ZVM9 353 aa16.79■□□□□ 0.28
RNF40-212ENST00000602784 ENTPD3O75355 529 aa16.79■□□□□ 0.28
RNF40-212ENST00000602784 ZFYP08048 801 aaPredicted RBP16.79■□□□□ 0.28
RNF40-212ENST00000602784 ADD2P35612 726 aa16.79■□□□□ 0.28
RNF40-212ENST00000602784 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
RNF40-212ENST00000602784 EVI5LQ96CN4 794 aa16.79■□□□□ 0.28
RNF40-212ENST00000602784 TRPM7Q96QT4 1865 aa16.79■□□□□ 0.28
RNF40-212ENST00000602784 CNTNAP1P78357 1384 aa16.78■□□□□ 0.28
RNF40-212ENST00000602784 RFX7Q2KHR2 1363 aa16.78■□□□□ 0.28
RNF40-212ENST00000602784 WDHD1O75717 1129 aaPredicted RBP16.78■□□□□ 0.28
RNF40-212ENST00000602784 CELF2O95319 508 aaKnown RBP16.78■□□□□ 0.28
RNF40-212ENST00000602784 NF2P35240 595 aa16.78■□□□□ 0.28
RNF40-212ENST00000602784 CACNB3P54284 484 aa16.78■□□□□ 0.28
RNF40-212ENST00000602784 SUPT20HL1Q3ZLR7 823 aa16.78■□□□□ 0.28
RNF40-212ENST00000602784 DLK2Q6UY11 383 aa16.78■□□□□ 0.28
RNF40-212ENST00000602784 FAM151AQ8WW52 585 aa16.78■□□□□ 0.28
RNF40-212ENST00000602784 CREBZFQ9NS37 354 aa16.78■□□□□ 0.28
RNF40-212ENST00000602784 AATFQ9NY61 560 aaKnown RBP eCLIP16.78■□□□□ 0.28
RNF40-212ENST00000602784 SCAF8Q9UPN6 1271 aaKnown RBP16.78■□□□□ 0.28
RNF40-212ENST00000602784 RNF113AO15541 343 aaKnown RBP16.77■□□□□ 0.28
RNF40-212ENST00000602784 FKBP1BP68106 108 aa16.77■□□□□ 0.28
RNF40-212ENST00000602784 NFIAQ12857 509 aa16.77■□□□□ 0.28
RNF40-212ENST00000602784 TEPSINQ96N21 525 aa16.77■□□□□ 0.28
RNF40-212ENST00000602784 RIOK1Q9BRS2 568 aaKnown RBP16.77■□□□□ 0.28
RNF40-212ENST00000602784 FAM198AQ9UFP1 575 aa16.77■□□□□ 0.28
RNF40-212ENST00000602784 RPAP1Q9BWH6 1393 aaPredicted RBP16.77■□□□□ 0.27
RNF40-212ENST00000602784 MAGEB6P1A0A0J9YX57 407 aa16.76■□□□□ 0.27
RNF40-212ENST00000602784 RGS3P49796 1198 aa16.76■□□□□ 0.27
RNF40-212ENST00000602784 PRAMEF18Q5VWM3 479 aa16.76■□□□□ 0.27
RNF40-212ENST00000602784 TEX11Q8IYF3 940 aa16.76■□□□□ 0.27
RNF40-212ENST00000602784 MIGA1Q8NAN2 632 aa16.76■□□□□ 0.27
RNF40-212ENST00000602784 SH3RF3Q8TEJ3 882 aaPredicted RBP16.76■□□□□ 0.27
RNF40-212ENST00000602784 HOOK2Q96ED9 719 aa16.76■□□□□ 0.27
RNF40-212ENST00000602784 TMEM39BQ9GZU3 492 aa16.76■□□□□ 0.27
RNF40-212ENST00000602784 MYH7P12883 1935 aa16.76■□□□□ 0.27
RNF40-212ENST00000602784 C2orf69Q8N8R5 385 aa16.75■□□□□ 0.27
RNF40-212ENST00000602784 FSD1Q9BTV5 496 aa16.75■□□□□ 0.27
RNF40-212ENST00000602784 ZNF408Q9H9D4 720 aa16.75■□□□□ 0.27
RNF40-212ENST00000602784 GBA2Q9HCG7 927 aaPredicted RBP16.75■□□□□ 0.27
RNF40-212ENST00000602784 DYNLL1P63167 89 aaKnown RBP16.74■□□□□ 0.27
RNF40-212ENST00000602784 TCP10Q12799 353 aa16.74■□□□□ 0.27
RNF40-212ENST00000602784 NBPF12Q5TAG4 269 aaPredicted RBP16.74■□□□□ 0.27
RNF40-212ENST00000602784 APPBP2Q92624 585 aa16.74■□□□□ 0.27
RNF40-212ENST00000602784 DDX4Q9NQI0 724 aaKnown RBP16.74■□□□□ 0.27
RNF40-212ENST00000602784 COL2A1P02458 1487 aaPredicted RBP16.73■□□□□ 0.27
RNF40-212ENST00000602784 TRIM6-TRIM34B2RNG4 842 aa16.73■□□□□ 0.27
RNF40-212ENST00000602784 PPP1R12BO60237 982 aaPredicted RBP16.73■□□□□ 0.27
RNF40-212ENST00000602784 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
RNF40-212ENST00000602784 SAPCD2Q86UD0 394 aa16.73■□□□□ 0.27
RNF40-212ENST00000602784 ZFPM1Q8IX07 1006 aa16.73■□□□□ 0.27
RNF40-212ENST00000602784 HHIPL1Q96JK4 782 aa16.73■□□□□ 0.27
RNF40-212ENST00000602784 CRNKL1Q9BZJ0 848 aaKnown RBP16.73■□□□□ 0.27
RNF40-212ENST00000602784 TLL2Q9Y6L7 1015 aa16.73■□□□□ 0.27
RNF40-212ENST00000602784 ATRNL1Q5VV63 1379 aa16.73■□□□□ 0.27
RNF40-212ENST00000602784 UNCXA6NJT0 531 aa16.72■□□□□ 0.27
RNF40-212ENST00000602784 CHGBP05060 677 aa16.72■□□□□ 0.27
RNF40-212ENST00000602784 PICALMQ13492 652 aa16.72■□□□□ 0.27
RNF40-212ENST00000602784 MAP3K11Q16584 847 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms