RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 THOC2Q8NI27 1593 aaKnown RBP10.71□□□□□ -0.69
LINC00343-208ENST00000599264 TMEM39AQ9NV64 488 aa10.71□□□□□ -0.69
LINC00343-208ENST00000599264 PIM2Q9P1W9 311 aa10.71□□□□□ -0.69
LINC00343-208ENST00000599264 LEMD3Q9Y2U8 911 aa10.71□□□□□ -0.69
LINC00343-208ENST00000599264 ACTL7BQ9Y614 415 aa10.71□□□□□ -0.69
LINC00343-208ENST00000599264 AOC2O75106 756 aa10.7□□□□□ -0.7
LINC00343-208ENST00000599264 SLFN14P0C7P3 912 aa10.7□□□□□ -0.7
LINC00343-208ENST00000599264 ASPAP45381 313 aa10.7□□□□□ -0.7
LINC00343-208ENST00000599264 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC00343-208ENST00000599264 FBF1Q8TES7 1133 aa10.7□□□□□ -0.7
LINC00343-208ENST00000599264 ECEL1O95672 775 aa10.69□□□□□ -0.7
LINC00343-208ENST00000599264 RAB6AP20340 208 aa10.69□□□□□ -0.7
LINC00343-208ENST00000599264 FAAP100Q0VG06 881 aa10.69□□□□□ -0.7
LINC00343-208ENST00000599264 PI16Q6UXB8 463 aa10.69□□□□□ -0.7
LINC00343-208ENST00000599264 TBC1D32Q96NH3 1257 aa10.69□□□□□ -0.7
LINC00343-208ENST00000599264 TRAIPQ9BWF2 469 aa10.69□□□□□ -0.7
LINC00343-208ENST00000599264 MED26O95402 600 aa10.68□□□□□ -0.7
LINC00343-208ENST00000599264 F13BP05160 661 aa10.68□□□□□ -0.7
LINC00343-208ENST00000599264 MAPK8P45983 427 aa10.68□□□□□ -0.7
LINC00343-208ENST00000599264 ASB16Q96NS5 453 aa10.68□□□□□ -0.7
LINC00343-208ENST00000599264 WDR18Q9BV38 432 aa10.68□□□□□ -0.7
LINC00343-208ENST00000599264 SRCIN1Q9C0H9 1055 aa10.68□□□□□ -0.7
LINC00343-208ENST00000599264 AKAP2Q9Y2D5 859 aa10.68□□□□□ -0.7
LINC00343-208ENST00000599264 NESP48681 1621 aa10.68□□□□□ -0.7
LINC00343-208ENST00000599264 NFICP08651 508 aa10.67□□□□□ -0.7
LINC00343-208ENST00000599264 GSTP1P09211 210 aaKnown RBP10.67□□□□□ -0.7
LINC00343-208ENST00000599264 ATP2B2Q01814 1243 aa10.67□□□□□ -0.7
LINC00343-208ENST00000599264 ALG1LQ6GMV1 187 aa10.67□□□□□ -0.7
LINC00343-208ENST00000599264 NXPE4Q6UWF7 544 aa10.67□□□□□ -0.7
LINC00343-208ENST00000599264 KRT82Q9NSB4 513 aa10.67□□□□□ -0.7
LINC00343-208ENST00000599264 FAM105AQ9NUU6 356 aa10.67□□□□□ -0.7
LINC00343-208ENST00000599264 PRKAG2Q9UGJ0 569 aa10.67□□□□□ -0.7
LINC00343-208ENST00000599264 SPINK2P20155 84 aa10.66□□□□□ -0.7
LINC00343-208ENST00000599264 CYP27A1Q02318 531 aa10.66□□□□□ -0.7
LINC00343-208ENST00000599264 ZAR1Q86SH2 424 aa10.66□□□□□ -0.7
LINC00343-208ENST00000599264 DTX1Q86Y01 620 aa10.66□□□□□ -0.7
LINC00343-208ENST00000599264 ACSS3Q9H6R3 686 aa10.66□□□□□ -0.7
LINC00343-208ENST00000599264 NCAPD3P42695 1498 aa10.66□□□□□ -0.7
LINC00343-208ENST00000599264 GIPC1O14908 333 aa10.65□□□□□ -0.7
LINC00343-208ENST00000599264 LIG1P18858 919 aa10.65□□□□□ -0.7
LINC00343-208ENST00000599264 GSTT1P30711 240 aa10.65□□□□□ -0.7
LINC00343-208ENST00000599264 DUSP27Q5VZP5 1158 aa10.65□□□□□ -0.7
LINC00343-208ENST00000599264 ZC3H12CQ9C0D7 883 aaKnown RBP10.65□□□□□ -0.7
LINC00343-208ENST00000599264 ATXN3LQ9H3M9 355 aa10.65□□□□□ -0.7
LINC00343-208ENST00000599264 SEMA6CQ9H3T2 930 aa10.65□□□□□ -0.7
LINC00343-208ENST00000599264 GSX1Q9H4S2 264 aaPredicted RBP10.65□□□□□ -0.7
LINC00343-208ENST00000599264 CCDC86Q9H6F5 360 aaKnown RBP10.65□□□□□ -0.7
LINC00343-208ENST00000599264 WNT11O96014 354 aa10.64□□□□□ -0.71
LINC00343-208ENST00000599264 FOSL1P15407 271 aa10.64□□□□□ -0.71
LINC00343-208ENST00000599264 FMR1Q06787 632 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC00343-208ENST00000599264 KCNB2Q92953 911 aa10.64□□□□□ -0.71
LINC00343-208ENST00000599264 EMILIN2Q9BXX0 1053 aa10.64□□□□□ -0.71
LINC00343-208ENST00000599264 PIDD1Q9HB75 910 aa10.64□□□□□ -0.71
LINC00343-208ENST00000599264 ID3Q02535 119 aa10.63□□□□□ -0.71
LINC00343-208ENST00000599264 SULF2Q8IWU5 870 aa10.63□□□□□ -0.71
LINC00343-208ENST00000599264 DAGLAQ9Y4D2 1042 aa10.63□□□□□ -0.71
LINC00343-208ENST00000599264 SAMM50Q9Y512 469 aa10.63□□□□□ -0.71
LINC00343-208ENST00000599264 CEP44Q9C0F1 390 aa10.62□□□□□ -0.71
LINC00343-208ENST00000599264 PPP1R9AQ9ULJ8 1098 aa10.62□□□□□ -0.71
LINC00343-208ENST00000599264 SPG7Q9UQ90 795 aa10.62□□□□□ -0.71
LINC00343-208ENST00000599264 TMPRSS2O15393 492 aa10.61□□□□□ -0.71
LINC00343-208ENST00000599264 CYP26A1O43174 497 aa10.61□□□□□ -0.71
LINC00343-208ENST00000599264 ARNTP27540 789 aa10.61□□□□□ -0.71
LINC00343-208ENST00000599264 GP2P55259 537 aaKnown RBP10.61□□□□□ -0.71
LINC00343-208ENST00000599264 KIF4BQ2VIQ3 1234 aa10.61□□□□□ -0.71
LINC00343-208ENST00000599264 CRIM1Q9NZV1 1036 aa10.61□□□□□ -0.71
LINC00343-208ENST00000599264 PPM1HQ9ULR3 514 aa10.61□□□□□ -0.71
LINC00343-208ENST00000599264 ZNF862O60290 1169 aa10.6□□□□□ -0.71
LINC00343-208ENST00000599264 NME2P22392 152 aa10.6□□□□□ -0.71
LINC00343-208ENST00000599264 ADMP35318 185 aa10.6□□□□□ -0.71
LINC00343-208ENST00000599264 ANGEL1Q9UNK9 670 aaKnown RBP10.6□□□□□ -0.71
LINC00343-208ENST00000599264 HOXA10P31260 410 aaPredicted RBP10.59□□□□□ -0.71
LINC00343-208ENST00000599264 WDR89Q96FK6 387 aaPredicted RBP10.59□□□□□ -0.71
LINC00343-208ENST00000599264 FANCD2OSQ96PS1 177 aa10.59□□□□□ -0.71
LINC00343-208ENST00000599264 PSMG3-AS1Q96PY0 264 aa10.59□□□□□ -0.71
LINC00343-208ENST00000599264 KIF21AQ7Z4S6 1674 aa10.59□□□□□ -0.71
LINC00343-208ENST00000599264 FAM170BA6NMN3 283 aa10.58□□□□□ -0.72
LINC00343-208ENST00000599264 IRAK1P51617 712 aa10.58□□□□□ -0.72
LINC00343-208ENST00000599264 PDZD3Q86UT5 571 aa10.58□□□□□ -0.72
LINC00343-208ENST00000599264 C3orf58Q8NDZ4 430 aa10.58□□□□□ -0.72
LINC00343-208ENST00000599264 FRMD6Q96NE9 622 aa10.58□□□□□ -0.72
LINC00343-208ENST00000599264 CBX8Q9HC52 389 aa10.58□□□□□ -0.72
LINC00343-208ENST00000599264 SMARCA2P51531 1590 aa10.57□□□□□ -0.72
LINC00343-208ENST00000599264 CYP27C1Q4G0S4 372 aa10.57□□□□□ -0.72
LINC00343-208ENST00000599264 GATA6Q92908 595 aa10.57□□□□□ -0.72
LINC00343-208ENST00000599264 NECAB3Q96P71 396 aaPredicted RBP10.57□□□□□ -0.72
LINC00343-208ENST00000599264 FGD1P98174 961 aa10.56□□□□□ -0.72
LINC00343-208ENST00000599264 MAP1SQ66K74 1059 aaPredicted RBP10.56□□□□□ -0.72
LINC00343-208ENST00000599264 OGFOD3Q6PK18 319 aa10.56□□□□□ -0.72
LINC00343-208ENST00000599264 SEZ6L2Q6UXD5 910 aa10.56□□□□□ -0.72
LINC00343-208ENST00000599264 TPTE2Q6XPS3 522 aa10.56□□□□□ -0.72
LINC00343-208ENST00000599264 SMYD4Q8IYR2 804 aaPredicted RBP10.56□□□□□ -0.72
LINC00343-208ENST00000599264 SHISA5Q8N114 240 aa10.56□□□□□ -0.72
LINC00343-208ENST00000599264 ACSBG1Q96GR2 724 aa10.56□□□□□ -0.72
LINC00343-208ENST00000599264 LGR6Q9HBX8 967 aa10.56□□□□□ -0.72
LINC00343-208ENST00000599264 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
LINC00343-208ENST00000599264 HMGXB3Q12766 1538 aa10.55□□□□□ -0.72
LINC00343-208ENST00000599264 RNGTTO60942 597 aaKnown RBP10.55□□□□□ -0.72
LINC00343-208ENST00000599264 MSMPQ1L6U9 139 aa10.55□□□□□ -0.72
LINC00343-208ENST00000599264 OSBPL7Q9BZF2 842 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms