RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 EVI5LQ96CN4 794 aa10.12□□□□□ -0.79
VRK3-211ENST00000596445 TDRD3Q9H7E2 651 aaKnown RBP10.12□□□□□ -0.79
VRK3-211ENST00000596445 ZNF70Q9UC06 446 aaPredicted RBP10.12□□□□□ -0.79
VRK3-211ENST00000596445 CDK5RAP2Q96SN8 1893 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 TCRBV5S4A2TA0A5A2 114 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 CLRN2A0PK11 232 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 BAG3O95817 575 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 ADD2P35612 726 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 BTDP43251 543 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 PPP4CP60510 307 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 TTC22Q5TAA0 569 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 FKBP1CQ5VVH2 108 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 MAP1SQ66K74 1059 aaPredicted RBP10.11□□□□□ -0.79
VRK3-211ENST00000596445 CDC42EP5Q6NZY7 148 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 CDC37L1Q7L3B6 337 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 KRT26Q7Z3Y9 468 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 ADGRA1Q86SQ6 560 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 TICAM2Q86XR7 235 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 CERS3Q8IU89 383 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 SULF1Q8IWU6 871 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 NOL10Q9BSC4 688 aaKnown RBP10.11□□□□□ -0.79
VRK3-211ENST00000596445 USP40Q9NVE5 1235 aa10.11□□□□□ -0.79
VRK3-211ENST00000596445 TRPM7Q96QT4 1865 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 ZNF532Q9HCE3 1301 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 FOCADQ5VW36 1801 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 TRIM6-TRIM34B2RNG4 842 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 RNF113AO15541 343 aaKnown RBP10.1□□□□□ -0.79
VRK3-211ENST00000596445 ITGBL1O95965 494 aaPredicted RBP10.1□□□□□ -0.79
VRK3-211ENST00000596445 ZFYP08048 801 aaPredicted RBP10.1□□□□□ -0.79
VRK3-211ENST00000596445 PLCG2P16885 1265 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 RHBDL3P58872 404 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 TNFAIP1Q13829 316 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 UBE3CQ15386 1083 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 USP48Q86UV5 1035 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 FSD1Q9BTV5 496 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 GLIS2Q9BZE0 524 aaPredicted RBP10.1□□□□□ -0.79
VRK3-211ENST00000596445 VEZTQ9HBM0 779 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 AATFQ9NY61 560 aaKnown RBP eCLIP10.1□□□□□ -0.79
VRK3-211ENST00000596445 TMOD2Q9NZR1 351 aa10.1□□□□□ -0.79
VRK3-211ENST00000596445 TCP10L2B9ZVM9 353 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 ADM5C9JUS6 153 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 TNNI2P48788 182 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 CACNB3P54284 484 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 FAM83AQ86UY5 434 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 SKAP1Q86WV1 359 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 MIGA1Q8NAN2 632 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 RILPL2Q969X0 211 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 IDI2Q9BXS1 227 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 DEFB129Q9H1M3 183 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 PPP2R3BQ9Y5P8 575 aa10.09□□□□□ -0.79
VRK3-211ENST00000596445 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
VRK3-211ENST00000596445 TRAF5O00463 557 aa10.08□□□□□ -0.8
VRK3-211ENST00000596445 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
VRK3-211ENST00000596445 WDHD1O75717 1129 aaPredicted RBP10.08□□□□□ -0.8
VRK3-211ENST00000596445 CHGBP05060 677 aa10.08□□□□□ -0.8
VRK3-211ENST00000596445 GSPT1P15170 499 aaKnown RBP10.08□□□□□ -0.8
VRK3-211ENST00000596445 RGS3P49796 1198 aa10.08□□□□□ -0.8
VRK3-211ENST00000596445 DYNLL1P63167 89 aaKnown RBP10.08□□□□□ -0.8
VRK3-211ENST00000596445 RASA3Q14644 834 aa10.08□□□□□ -0.8
VRK3-211ENST00000596445 SLFNL1Q499Z3 407 aa10.08□□□□□ -0.8
VRK3-211ENST00000596445 TEX11Q8IYF3 940 aa10.08□□□□□ -0.8
VRK3-211ENST00000596445 SH3RF3Q8TEJ3 882 aaPredicted RBP10.08□□□□□ -0.8
VRK3-211ENST00000596445 APPBP2Q92624 585 aa10.08□□□□□ -0.8
VRK3-211ENST00000596445 RIOK1Q9BRS2 568 aaKnown RBP10.08□□□□□ -0.8
VRK3-211ENST00000596445 SCAF8Q9UPN6 1271 aaKnown RBP10.08□□□□□ -0.8
VRK3-211ENST00000596445 CNTNAP1P78357 1384 aa10.08□□□□□ -0.8
VRK3-211ENST00000596445 RFX7Q2KHR2 1363 aa10.08□□□□□ -0.8
VRK3-211ENST00000596445 PASKQ96RG2 1323 aa10.07□□□□□ -0.8
VRK3-211ENST00000596445 ENTPD3O75355 529 aa10.07□□□□□ -0.8
VRK3-211ENST00000596445 SDSP20132 328 aa10.07□□□□□ -0.8
VRK3-211ENST00000596445 NFIAQ12857 509 aa10.07□□□□□ -0.8
VRK3-211ENST00000596445 ZMYM1Q5SVZ6 1142 aa10.07□□□□□ -0.8
VRK3-211ENST00000596445 FAM151AQ8WW52 585 aa10.07□□□□□ -0.8
VRK3-211ENST00000596445 OSBP2Q969R2 916 aa10.07□□□□□ -0.8
VRK3-211ENST00000596445 AIDAQ96BJ3 306 aa10.07□□□□□ -0.8
VRK3-211ENST00000596445 CRNKL1Q9BZJ0 848 aaKnown RBP10.07□□□□□ -0.8
VRK3-211ENST00000596445 PUS7LQ9H0K6 701 aaKnown RBP10.07□□□□□ -0.8
VRK3-211ENST00000596445 DDX4Q9NQI0 724 aaKnown RBP10.07□□□□□ -0.8
VRK3-211ENST00000596445 FAM198AQ9UFP1 575 aa10.07□□□□□ -0.8
VRK3-211ENST00000596445 MYH1P12882 1939 aa10.07□□□□□ -0.8
VRK3-211ENST00000596445 HIP1O00291 1037 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 MBD4O95243 580 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 FMR1Q06787 632 aaKnown RBP eCLIP10.06□□□□□ -0.8
VRK3-211ENST00000596445 TCP10Q12799 353 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 PICALMQ13492 652 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 BMP2KLQ5H9B9 411 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 PRAMEF18Q5VWM3 479 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 DLK2Q6UY11 383 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 LCORLQ8N3X6 602 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 TGFBRAP1Q8WUH2 860 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 CDCA5Q96FF9 252 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 TEPSINQ96N21 525 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 TMEM39BQ9GZU3 492 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 ARMT1Q9H993 441 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 HELLSQ9NRZ9 838 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 CEP350Q5VT06 3117 aa10.06□□□□□ -0.8
VRK3-211ENST00000596445 COL2A1P02458 1487 aaPredicted RBP10.05□□□□□ -0.8
VRK3-211ENST00000596445 RPAP1Q9BWH6 1393 aaPredicted RBP10.05□□□□□ -0.8
VRK3-211ENST00000596445 NAV1Q8NEY1 1877 aa10.05□□□□□ -0.8
VRK3-211ENST00000596445 M0R2C6 588 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms